Ggra7552.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7552.t1
Unique NameGgra7552.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length288
Homology
BLAST of Ggra7552.t1 vs. uniprot
Match: A0A2V3IVI7 (CDAN1-interacting nuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVI7_9FLOR)

HSP 1 Score: 413 bits (1061), Expect = 4.030e-143
Identity = 199/283 (70.32%), Postives = 234/283 (82.69%), Query Frame = 0
Query:    1 MLMSEWMRMCSLLVCREDTTRIARERPDIGHDTISLIYEQLYARQVAKTFYLIRMHGKAFVERYQSGQSLTDIAERFNLSPSLVARKVLELHLGLNRRAITQLMRDPSSINDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIFPTEIELLPGGSRFEACLGD--DEANESEEDEQI 281
            ML  EW+ +CS L C+ED +RIARE+P + HDTI+LIYEQLY RQVA+TFY +++HGK FV+ +++GQSL DIAE FNLSP LVARKV+ELHLGLNR+ ITQ +R+PS I DERLR D+ LC+E+DEHCSPR DRLR ALGLEYELRL DEVKN G EFETE+ LR+RGCHKTPDILL VP+  RNKV+RWIDSKAKFGD+YTLN+DY SSVSSYIGRFG GMV+YWFGFIEDCDS ML DNGL++ + FPTEIE LPG SRF   L D  DE++   + EQ 
Sbjct:    1 MLNVEWLSLCSSLRCKEDISRIAREQPHLSHDTIALIYEQLYTRQVARTFYQVKLHGKTFVKNFKNGQSLLDIAESFNLSPVLVARKVMELHLGLNRKLITQALREPSMIGDERLRADVCLCIELDEHCSPRTDRLRHALGLEYELRLRDEVKNCGFEFETEDDLRNRGCHKTPDILLRVPISFRNKVIRWIDSKAKFGDKYTLNQDYTSSVSSYIGRFGPGMVIYWFGFIEDCDSGMLNDNGLVVMDRFPTEIETLPGSSRFSVDLLDEHDESDSEVDAEQF 283          
BLAST of Ggra7552.t1 vs. uniprot
Match: M2X2F4 (CDAN1-interacting nuclease 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X2F4_GALSU)

HSP 1 Score: 218 bits (556), Expect = 2.360e-66
Identity = 111/265 (41.89%), Postives = 161/265 (60.75%), Query Frame = 0
Query:    1 MLMSEWMRMCSLLVCREDTTRIA--------RERPDIGHDTISLIYEQLYARQVAKTFYLIRMHGKAFVERYQSGQSLTDIAERFNLSPSLVARKVLELHLGLNRRAITQLMRDPSSINDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIFPTEIELL 257
            M + E+  +CS L  R+D   ++         E     ++T+  IY Q Y  +VA                Y SGQ L DI+ER N++P +  R++LE +    ++ I++++R+P  I D+RLRQ++  C+E DEH  P  DR+R   GL+YE  L   ++ +G+ F+TE  LR +G  KTPD LL VPV +   V+ WIDSKAKFGDEY L +DY  S+SSY+GR+G+GMV+YWFGF+ED D  ML D G++++  FP  IEL+
Sbjct:   50 MRLQEYEALCSQLHSRKDVYLLSGISSSLRENESTSYNYETLYAIYSQRYQTEVAAVAREALKELCLLSTLYDSGQHLLDISERLNVAPCITVRRLLE-YKSFGKKQISRVLRNPYEIKDDRLRQEVIACIEQDEHYGPFADRMRQVQGLDYEYILYQHLEIMGIPFDTETSLRCKGLFKTPDALLHVPVKVGTNVISWIDSKAKFGDEYYLRRDYNDSISSYVGRYGSGMVIYWFGFLEDIDVPMLHDQGVVLSSSFPKNIELV 313          
BLAST of Ggra7552.t1 vs. uniprot
Match: A0A3P3YCX7 (CDAN1-interacting nuclease 1 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YCX7_PLABS)

HSP 1 Score: 186 bits (471), Expect = 3.190e-54
Identity = 94/235 (40.00%), Postives = 149/235 (63.40%), Query Frame = 0
Query:   21 RIARERPD--IGHDTISLIYEQLYARQVAKTFYLIRMHGK--AFVERYQSGQSLTDIAERFNLSPSLVARKVLELHLGLNRRAITQLMRDPSSINDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIFP 251
            R+A E P+  + ++T+  IY Q Y  Q     ++ +      ++V+RYQ G+ L  IA+  +L+P L+AR +L   L ++ + ITQ +R+P+ ++DERLR  +  CVE DEH SP  +R+R+ALGLEYE  L + + N G+ F++E+ LR  G  KTPD+ L  P+ +R ++V WIDSKA FGD  TL  D  + V  Y+ R+G GM+++WFG++++ DS    D  ++++  FP
Sbjct:   25 RLAEEWPEYVVPYETLVAIYTQTYQLQTRMRMHVHKRQTNIDSYVQRYQEGEELISIAKSIDLAPCLLARIILRETLSMSPKDITQCLREPALVDDERLRNQLVRCVESDEHYSPSSERIRSALGLEYEFVLYESLFNTGVPFDSEDDLRREGRPKTPDVRLRSPIAVRGRIVNWIDSKAMFGDVRTL-ADCQNQVRGYVHRYGPGMIIFWFGYVQEVDS----DPDIILSHGFP 254          
BLAST of Ggra7552.t1 vs. uniprot
Match: D7FXX0 (CDAN1-interacting nuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX0_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.430e-45
Identity = 93/242 (38.43%), Postives = 146/242 (60.33%), Query Frame = 0
Query:   29 IGHDTISLIYEQLYARQVAKTFYLIRMHGKAFVERYQSGQSLTDIAERFNL--SPSLVARKVL-ELHLGLNRRAITQLMRDPSSINDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLI---RNK--VVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQD--NGLLITEIFPTEIELLPGG 260
            + +D +  +  Q+++R + K  +  +   K F+ +Y+ G  + DIA +  L  SP L+AR ++  L  G    AI QLMR PS I DERLR+++  C+  D   SP LDR+R  +G EYE  L  +++  G+ FE+E+ LR +G +KTPD+LL  P+ +   RN+  +V WIDSKA FGDE+T  +++ S + SY+ R+G G+V+YWFG++E   S         +++   FP+ I +LP G
Sbjct:   33 LPYDALQSLRRQMFSRHIRKVDWRCKQRTKEFLTQYRKGSRIIDIARQPGLRYSPYLMARILVGALEPGA---AIAQLMRTPSLILDERLRREVEECISDDRDYSPHLDRVRRGVGAEYEFVLQQKLRARGVAFESESDLRQKGAYKTPDMLLQTPMAVKGPRNEWVIVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGYVETLVSPEFDGYKKDIMVKADFPSPI-MLPDG 270          
BLAST of Ggra7552.t1 vs. uniprot
Match: A0A5J4Z6J7 (CDAN1-interacting nuclease 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6J7_PORPP)

HSP 1 Score: 164 bits (415), Expect = 1.700e-45
Identity = 89/210 (42.38%), Postives = 128/210 (60.95%), Query Frame = 0
Query:   65 QSGQSLTDIAERFNLSPSLVARKVLELHLGLNRRAITQLMRDPSSINDE--RLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNK--------------------VVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIFPT 252
            Q+ +S+ ++A   + SP  + R+VLE   G ++R IT   +DP  +      +   +   +E D+  +P  DRLR ALG+EYE+RL   ++NLG  FETE+ LR RG  KTPD LL VP+ ++ K                    +V WIDSKAKFGD  +L +DYVSS++SY+GRFG G+V+YWFGF+ED +  ML D G+L+ + FP+
Sbjct:   75 QAPRSVLEVARIASTSPCTLVRRVLEGR-GWSKREITDAFKDPERVLQRFPYIHGPLLTALEHDDIYAPAGDRLRRALGIEYEIRLQQHLENLGARFETEDDLRLRGEFKTPDALLHVPIAVQVKTRTRVGNAATTPFEEQSEIRLVTWIDSKAKFGDHDSLKQDYVSSIASYVGRFGPGLVLYWFGFVEDANVPMLSDRGVLVMDEFPS 283          
BLAST of Ggra7552.t1 vs. uniprot
Match: A0A3M6V6U0 (CDAN1-interacting nuclease 1 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6U0_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.150e-44
Identity = 98/272 (36.03%), Postives = 150/272 (55.15%), Query Frame = 0
Query:   13 LVCREDTTRIARERPDIGHDTISLIYEQLYARQVAKTFYLIRMHG--KAFVERYQSGQSLTDIAERFNLSPSLVARKVLELHLGLNRRAITQLMRDPSS---------------INDE--RLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNK------VVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIFPTEIELLPG 259
            L+C  DT     +   + ++T S+I  QL  RQ   T  L R +   K +V R+ +G+S+ +IA   + SP ++ R VLE   G ++  I+ + +D  +                N+E  R+ Q+I  C+E D +CSP  DR+R  +G+EYE  L + ++N  L FE+E+ LR +G  KTPD+ L VP+ +++       VV WIDSKA FGD +T   +  S +  Y+ R+G GMV+YWFG +   DS     + + IT+ FP +I LLPG
Sbjct:    8 LICSLDTFSSTLQLT-VTNETFSVIKRQLQHRQFRSTLRLHRQNKSLKMYVARFDTGESMCEIATSVDFSPCMMVRLVLEHKYGWSKTTISNVFKDAMTDDESQRDSLLNRRGLSNEEYTRVIQEIQECIEKDVYCSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLVPIGVKDSKHGQLHVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGHVAQLDSG----SDIFITDSFPPDI-LLPG 273          
BLAST of Ggra7552.t1 vs. uniprot
Match: A0A0M0JP20 (CDAN1-interacting nuclease 1 (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JP20_9EUKA)

HSP 1 Score: 161 bits (408), Expect = 1.220e-44
Identity = 94/255 (36.86%), Postives = 144/255 (56.47%), Query Frame = 0
Query:   18 DTTRIARERP-DIGHDTISLIYEQLYARQVAKTFYLIRMHGKAFVERYQSGQSLTDIAERFNLSPSLVARKVLELHLGLNR-RAITQLMRDPSSINDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIE--DCDSRMLQDNGLLITEIFPTEIELLPGGSRFEACLG 268
            D  R+AR+    +  + ++ +  Q       +T    R   + +V+R+ +G+SL  I     + P+ +AR VLE HLG  + R + QL++ P  I D RLR ++ + ++ D H  P +D  +  +GLEYE  L  +++ LG+ F +E QL+ RG  KTPD LL VP+L+R +VV WIDSKA FGD  T  + +    + Y+ R+ AG+V+YWFGF E  D DSR+L      + ++ P E  LL       AC+G
Sbjct:   20 DVERLARDPGCPLSFEALTSVLGQKQLALTKRTDGQHREQAQRYVDRFLAGESLVAIGNSIGVPPTKLARYVLERHLGEKKGRDVGQLLKKPRLIADARLRHEVTMAIDEDPHFGPHVDAAKHIIGLEYEELLAQKLRALGVPFLSEEQLKQRGDFKTPDALLPVPLLVRGRVVNWIDSKATFGDPETHAEYHAKQFAGYLHRYDAGLVLYWFGFDESIDTDSRVL-----CLDDLRPDECALL-------ACMG 262          
BLAST of Ggra7552.t1 vs. uniprot
Match: A0A2B4STE6 (CDAN1-interacting nuclease 1 n=5 Tax=Scleractinia TaxID=6125 RepID=A0A2B4STE6_STYPI)

HSP 1 Score: 159 bits (403), Expect = 8.170e-44
Identity = 98/260 (37.69%), Postives = 146/260 (56.15%), Query Frame = 0
Query:   16 REDTTRIARERPDIGHDTISLIYEQLYARQVAKTFYLIRMHGK-----AFVERYQSGQS-------LTDIAERFNLSPSLVARKVLELHL------GLN--RRAITQLMRDPSS-INDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIFPTEI 254
            R+    IA + P + ++T+  IY Q Y ++  K  +    H K      + +RY SG S       L  IAE  +LS SL+AR VLE HL      G N  R  ++Q+M+DP S I D+ L  ++  C+  D +  P +D ++ ++G EYEL L + ++N G++F  E+ LR RG  KTPD  L +P+ +   V+ WI+SKA FGDEY           SY  RFG GMV+YWFGFI++ D    ++ G+++ + FPT+I
Sbjct:   19 RDCLKTIALQFPGVTYNTLVSIYSQDYQKKTRKNHH---KHHKPDVMETYYKRYLSGVSQDSGEPVLLRIAEEVDLSHSLLARIVLERHLSHTCYEGQNPPRGVVSQMMKDPLSLIEDKTLATEVHQCILNDPNYGPLVDNIKRSVGYEYELILRERLENRGIQFLGEDDLRSRGYDKTPDCKLEIPIAVDGCVINWIESKASFGDEYNHQTYLKDQFWSYWNRFGPGMVIYWFGFIDELDCN--RERGIILKDDFPTDI 273          
BLAST of Ggra7552.t1 vs. uniprot
Match: protein C15orf41 homolog n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A6FF7 (protein C15orf41 homolog n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A6FF7)

HSP 1 Score: 159 bits (402), Expect = 1.030e-43
Identity = 92/249 (36.95%), Postives = 144/249 (57.83%), Query Frame = 0
Query:   22 IARERPDIGHDTISLIYEQLYARQVAKTFYL------IRMHGKAFVERYQSGQS--LTDIAERFNLSPSLVARKVLELHL------GLN--RRAITQLMRDPSSINDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIFPTEI 254
            I +E PD    TI  IY Q Y +++ KT ++      + M+ + ++E  Q+ +   L  I+    LSP+L+AR +LE +L      G N  R  +T+LM+D + IND  L  +I  C+  D+H  P +D ++ ++G E+E +L   + +L L +  E+Q+R RG  KTPD+ L VP  +   V+ WI+SKA FGDEY+          SY  RFG GMV+YWFGFIE+ D+   ++ G+++++ FP  I
Sbjct:   25 IVKEFPDFSISTIGSIYAQDYQKKMRKTHHIHYNPMKMEMYYEQYLEGVQNKERHILLKISNGIELSPALLARMILERYLSSTKYGGENPPRSYVTKLMKDNTLINDPMLASEIHECLVSDDHYGPHVDNIKQSIGHEHECKLNRILDSLNLAYIGEDQMRTRGFDKTPDVKLEVPFSVDGHVINWIESKASFGDEYSHRGYLKDQFWSYWNRFGPGMVIYWFGFIEELDTD--REKGIILSDKFPENI 271          
BLAST of Ggra7552.t1 vs. uniprot
Match: CDAN1-interacting nuclease 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8399 (CDAN1-interacting nuclease 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8399)

HSP 1 Score: 158 bits (400), Expect = 2.050e-43
Identity = 86/255 (33.73%), Postives = 144/255 (56.47%), Query Frame = 0
Query:   16 REDTTRIARERPDIGHDTISLIYEQLYARQVAKTFYL------IRMHGKAFVERYQSGQS--LTDIAERFNLSPSLVARKVLELHLGLNR--------RAITQLMRDPSSINDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTDEVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIFPTEI 254
            R+    IA + P +  + +  I+ Q Y +++ KT Y+      +  +  +F++  Q+G+   L  ++E  +LSP+L+ R +LE +L   +          +TQLM++PS I+   L  +I  C+  D+H  P  D ++ ++G EYE +L + +  +G+ +  E+Q+R +G  KTPD+ L VP+ +   VV WI+SKA FGDE +          SY  RFG GMV+YWFGFI++ D    QD G+++ + FP +I
Sbjct:   19 RDSLPLIAEKFPSVSLNALGSIFSQDYQKKMRKTHYIHYSPEAVNKYYDSFMQGLQNGKRNILISLSEELDLSPALLGRIILERYLSNTKYNGEPPPKTVVTQLMKEPSLIDQPILAVEIHQCILGDDHYGPLCDSIKHSIGHEYEFKLNNTLDRMGIAYIGEDQMRVKGYDKTPDVKLEVPIAVDGHVVNWIESKASFGDEQSHKTYLKDQFWSYWNRFGPGMVIYWFGFIDELDIN--QDKGIILRDHFPEQI 271          
The following BLAST results are available for this feature:
BLAST of Ggra7552.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVI74.030e-14370.32CDAN1-interacting nuclease 1 n=1 Tax=Gracilariopsi... [more]
M2X2F42.360e-6641.89CDAN1-interacting nuclease 1 n=1 Tax=Galdieria sul... [more]
A0A3P3YCX73.190e-5440.00CDAN1-interacting nuclease 1 n=1 Tax=Plasmodiophor... [more]
D7FXX01.430e-4538.43CDAN1-interacting nuclease 1 n=1 Tax=Ectocarpus si... [more]
A0A5J4Z6J71.700e-4542.38CDAN1-interacting nuclease 1 n=1 Tax=Porphyridium ... [more]
A0A3M6V6U01.150e-4436.03CDAN1-interacting nuclease 1 n=1 Tax=Peronospora e... [more]
A0A0M0JP201.220e-4436.86CDAN1-interacting nuclease 1 (Fragment) n=1 Tax=Ch... [more]
A0A2B4STE68.170e-4437.69CDAN1-interacting nuclease 1 n=5 Tax=Scleractinia ... [more]
protein C15orf41 homolog n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A6FF71.030e-4336.95protein C15orf41 homolog n=1 Tax=Crassostrea gigas... [more]
CDAN1-interacting nuclease 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D83992.050e-4333.73CDAN1-interacting nuclease 1-like n=1 Tax=Mercenar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029404CDAN1-interacting nuclease 1PFAMPF14811TPDcoord: 112..247
e-value: 2.0E-41
score: 141.1
IPR029404CDAN1-interacting nuclease 1PANTHERPTHR31661SIMILAR TO CDNA SEQUENCE BC052040coord: 15..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:48941..49804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7552.t1Ggra7552.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 48941..49804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7552.t1 ID=Ggra7552.t1|Name=Ggra7552.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=288bp
MLMSEWMRMCSLLVCREDTTRIARERPDIGHDTISLIYEQLYARQVAKTF
YLIRMHGKAFVERYQSGQSLTDIAERFNLSPSLVARKVLELHLGLNRRAI
TQLMRDPSSINDERLRQDIALCVEMDEHCSPRLDRLRTALGLEYELRLTD
EVKNLGLEFETENQLRHRGCHKTPDILLCVPVLIRNKVVRWIDSKAKFGD
EYTLNKDYVSSVSSYIGRFGAGMVVYWFGFIEDCDSRMLQDNGLLITEIF
PTEIELLPGGSRFEACLGDDEANESEEDEQIPDWEEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029404CDIN1