Ggra7532.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A2S1Z949 (Endonuclea_NS_2 domain-containing protein n=1 Tax=Streptomyces spongiicola TaxID=1690221 RepID=A0A2S1Z949_9ACTN) HSP 1 Score: 71.2 bits (173), Expect = 3.690e-11 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 197 HACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPINIRM 304
H S A KD P S+ P+GW+ +G R +L+AA LGG++ D RNFVT HAYANSPVM +E V + ++ G I+Y TPIY P+ + +
Sbjct: 48 HPNQRNTSSAAPGKDPHPP-SVDPAGWQ---SGQGYNRAHLLAAVLGGANNDKRNFVTMHAYANSPVMRGFELRVRD---AVKAGENILYRATPIYSGSNPLPLGVTL 148
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A0C1Y2R7 (Type IV secretion protein Rhs n=1 Tax=Streptomyces sp. 150FB TaxID=1576605 RepID=A0A0C1Y2R7_9ACTN) HSP 1 Score: 74.3 bits (181), Expect = 1.060e-10 Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 0
Query: 217 SIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPINIRMRA 306
S+ P+GW+ R +L+ A++GGS+KD RNFVT HAYANSP+M YE V + ++D G I Y+ TP+Y+ ++ P + + A
Sbjct: 1446 SVDPAGWESDKG---YNRAHLLGAQIGGSNKDPRNFVTMHAYANSPIMRRYEGQVRK---AVDKGEVIEYSATPVYQGDSVIPEGVWLEA 1529
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A0M8V539 (Type IV secretion protein Rhs n=1 Tax=Streptomyces sp. MMG1121 TaxID=1415544 RepID=A0A0M8V539_9ACTN) HSP 1 Score: 74.3 bits (181), Expect = 1.070e-10 Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 0
Query: 215 GGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIY-EEPALYPINIRMRAV-RRGFRIF------GVLYDLIIWN 324
G + P+GW+ +G R +L+AA +GGS+KD RNFVT HAYANSPVM E V + G I Y++TPIY +E A P+ + + A GF++ G L IWN
Sbjct: 1468 GPQVDPAGWE---SGKGYNRAHLLAAMIGGSNKDRRNFVTMHAYANSPVMRAVELQVRN---AARDGEIIQYSVTPIYADEHAKIPLGVTIEAHGSNGFQMHPHGSHTGGTNILTIWN 1579
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A0N0HHB9 (Type IV secretion protein Rhs n=3 Tax=Streptomyces TaxID=1883 RepID=A0A0N0HHB9_9ACTN) HSP 1 Score: 73.9 bits (180), Expect = 1.420e-10 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 0
Query: 218 IKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIY-EEPALYPINIRMRAVR-RGFRIF------GVLYDLIIWN 324
+ P+GW+ +G R +L+AA +GGS+KD+RNFVT H+YANSP+M E V + D G TI Y++TPIY + A P+ + + A GF++ G L IWN
Sbjct: 1460 VDPAGWQ---SGMGYNRAHLLAAMIGGSNKDSRNFVTMHSYANSPIMRQVELQVRNAV--RDDGETIQYSVTPIYADNNAKIPLGVTIEAHGDNGFQMHPHGSTEGGTNALTIWN 1569
BLAST of Ggra7532.t1 vs. uniprot
Match: DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces spongiicola TaxID=1690221 RepID=UPI0015583958 (DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces spongiicola TaxID=1690221 RepID=UPI0015583958) HSP 1 Score: 69.7 bits (169), Expect = 1.860e-10 Identity = 42/97 (43.30%), Postives = 55/97 (56.70%), Query Frame = 0
Query: 197 HACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYE 293
H S A KD P S+ P+GW+ +G R +L+AA LGG++ D RNFVT HAYANSPVM +E V + ++ G I+Y TPIY
Sbjct: 88 HPNQRNTSSAAPGKDPHPP-SVDPAGWQ---SGQGYNRAHLLAAVLGGANNDKRNFVTMHAYANSPVMRGFELRVRD---AVKAGENILYRATPIYS 177
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A2U9P311 (Type IV secretion protein Rhs n=1 Tax=Streptomyces actuosus TaxID=1885 RepID=A0A2U9P311_STRAS) HSP 1 Score: 72.4 bits (176), Expect = 4.500e-10 Identity = 55/172 (31.98%), Postives = 84/172 (48.84%), Query Frame = 0
Query: 161 PSGLHLIDAANVLAFSQHGGFLANRGFDDEQKNLDVHACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIY-EEPALYPINIRMRAV-RRGFRI------FGVLYDLIIWN 324
P GL D +V GG + + +HA + Q + L SP + P+GW+ +G R +L+AA +GGS+KD RNFVT H+YANSPVM E + ++ G I+Y++ PIY ++ A P+ + + A +GF + G + IWN
Sbjct: 1420 PLGLKPCDEGDVT----WGGRVQYGQLGPHNRATSMHATIAQ---DMLGGKTSP--QVDPAGWE---SGKGYNRAHLLAAMIGGSNKDPRNFVTMHSYANSPVMRQIELQIRN---AVKDGEIILYSVIPIYADDKAKIPLGVTIEAYGSKGFEMRPHGSDSGGTNSVTIWN 1576
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A100J153 (Putative deoxyribonuclease RhsC n=8 Tax=Streptomyces TaxID=1883 RepID=A0A100J153_9ACTN) HSP 1 Score: 70.5 bits (171), Expect = 1.890e-9 Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0
Query: 217 SIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIY-EEPALYPINIRMRA 306
S+ P+GW A+G R +L+AA +GGS+KD RNFVT H+YANSPVM E L + D+ + I Y++TPIY + A P+ + + A
Sbjct: 1450 SVDPAGW---ASGQGYNRAHLLAAMIGGSNKDPRNFVTMHSYANSPVMRQVE-LQIRNAVKNDNEI-IQYSVTPIYADHHAKIPLGVTIEA 1535
BLAST of Ggra7532.t1 vs. uniprot
Match: DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces sp. HSG2 TaxID=2797167 RepID=UPI00190664B4 (DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces sp. HSG2 TaxID=2797167 RepID=UPI00190664B4) HSP 1 Score: 70.5 bits (171), Expect = 2.020e-9 Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 0
Query: 186 GFDDEQKNLDVHACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPINIRM 304
G D + V A +T ++ SP S+ P+GW+ +G R +L+AA LGG + D RNFVT HAYANSPVM +E V + ++ G I+Y TPIY P+ + +
Sbjct: 2529 GLDQSGRATGVEAMLTPSNIGGKT---SP--SVDPAGWQ---SGQGYNRAHLLAAVLGGVNNDKRNFVTMHAYANSPVMRGFELQVRD---AVKAGENILYRATPIYSGSNPLPLGVTL 2636
BLAST of Ggra7532.t1 vs. uniprot
Match: DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces albidochromogenes TaxID=329524 RepID=UPI00110FB81E (DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces albidochromogenes TaxID=329524 RepID=UPI00110FB81E) HSP 1 Score: 68.9 bits (167), Expect = 4.330e-9 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 0
Query: 188 DDEQKNLDVHACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPINIRMRA 306
D+ + +HA + + A D P G+ P GW A R +L+ A+LGGS+ D NFVT HAYANSPVM E V + +++ G TI Y++TP+Y+ P +R+ A
Sbjct: 455 DEHGRPTAMHATLGKDMMGANPTD--PHGN--PPGW---AKDQGYNRAHLLGAQLGGSNFDPANFVTMHAYANSPVMRHIENQVRK---AVEAGETIQYSVTPVYDGSRPIPTGVRIDA 563
BLAST of Ggra7532.t1 vs. uniprot
Match: DUF6531 domain-containing protein n=1 Tax=Streptomyces sp. BH-MK-02 TaxID=2880933 RepID=UPI001D0A24C9 (DUF6531 domain-containing protein n=1 Tax=Streptomyces sp. BH-MK-02 TaxID=2880933 RepID=UPI001D0A24C9) HSP 1 Score: 68.9 bits (167), Expect = 5.960e-9 Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 0
Query: 215 GGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEP-ALYPINIRMRAV-RRGFRIF------GVLYDLIIWN 324
G + P+GW+ +G R +L+AA +GGS+KD RNFVT H+YANSPVM E V + D+ I Y++ PIY + A P+ + + A +GF + G + IWN
Sbjct: 1450 GPKVDPAGWE---SGKGYNRAHLLAAMIGGSNKDPRNFVTMHSYANSPVMRQVELQVRNAV--RDNDEIIQYSVKPIYADGNAKIPLGVTIEAHGNKGFTMHPHGSDSGGTNSVTIWN 1562 The following BLAST results are available for this feature:
BLAST of Ggra7532.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra7532.t1 ID=Ggra7532.t1|Name=Ggra7532.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bpback to top |