Ggra7532.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7532.t1
Unique NameGgra7532.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Homology
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A2S1Z949 (Endonuclea_NS_2 domain-containing protein n=1 Tax=Streptomyces spongiicola TaxID=1690221 RepID=A0A2S1Z949_9ACTN)

HSP 1 Score: 71.2 bits (173), Expect = 3.690e-11
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 0
Query:  197 HACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPINIRM 304
            H      S  A  KD  P  S+ P+GW+   +G    R +L+AA LGG++ D RNFVT HAYANSPVM  +E  V +   ++  G  I+Y  TPIY      P+ + +
Sbjct:   48 HPNQRNTSSAAPGKDPHPP-SVDPAGWQ---SGQGYNRAHLLAAVLGGANNDKRNFVTMHAYANSPVMRGFELRVRD---AVKAGENILYRATPIYSGSNPLPLGVTL 148          
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A0C1Y2R7 (Type IV secretion protein Rhs n=1 Tax=Streptomyces sp. 150FB TaxID=1576605 RepID=A0A0C1Y2R7_9ACTN)

HSP 1 Score: 74.3 bits (181), Expect = 1.060e-10
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 0
Query:  217 SIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPINIRMRA 306
            S+ P+GW+         R +L+ A++GGS+KD RNFVT HAYANSP+M  YE  V +   ++D G  I Y+ TP+Y+  ++ P  + + A
Sbjct: 1446 SVDPAGWESDKG---YNRAHLLGAQIGGSNKDPRNFVTMHAYANSPIMRRYEGQVRK---AVDKGEVIEYSATPVYQGDSVIPEGVWLEA 1529          
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A0M8V539 (Type IV secretion protein Rhs n=1 Tax=Streptomyces sp. MMG1121 TaxID=1415544 RepID=A0A0M8V539_9ACTN)

HSP 1 Score: 74.3 bits (181), Expect = 1.070e-10
Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 0
Query:  215 GGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIY-EEPALYPINIRMRAV-RRGFRIF------GVLYDLIIWN 324
            G  + P+GW+   +G    R +L+AA +GGS+KD RNFVT HAYANSPVM   E  V     +   G  I Y++TPIY +E A  P+ + + A    GF++       G    L IWN
Sbjct: 1468 GPQVDPAGWE---SGKGYNRAHLLAAMIGGSNKDRRNFVTMHAYANSPVMRAVELQVRN---AARDGEIIQYSVTPIYADEHAKIPLGVTIEAHGSNGFQMHPHGSHTGGTNILTIWN 1579          
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A0N0HHB9 (Type IV secretion protein Rhs n=3 Tax=Streptomyces TaxID=1883 RepID=A0A0N0HHB9_9ACTN)

HSP 1 Score: 73.9 bits (180), Expect = 1.420e-10
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 0
Query:  218 IKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIY-EEPALYPINIRMRAVR-RGFRIF------GVLYDLIIWN 324
            + P+GW+   +G    R +L+AA +GGS+KD+RNFVT H+YANSP+M   E  V   +   D G TI Y++TPIY +  A  P+ + + A    GF++       G    L IWN
Sbjct: 1460 VDPAGWQ---SGMGYNRAHLLAAMIGGSNKDSRNFVTMHSYANSPIMRQVELQVRNAV--RDDGETIQYSVTPIYADNNAKIPLGVTIEAHGDNGFQMHPHGSTEGGTNALTIWN 1569          
BLAST of Ggra7532.t1 vs. uniprot
Match: DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces spongiicola TaxID=1690221 RepID=UPI0015583958 (DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces spongiicola TaxID=1690221 RepID=UPI0015583958)

HSP 1 Score: 69.7 bits (169), Expect = 1.860e-10
Identity = 42/97 (43.30%), Postives = 55/97 (56.70%), Query Frame = 0
Query:  197 HACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYE 293
            H      S  A  KD  P  S+ P+GW+   +G    R +L+AA LGG++ D RNFVT HAYANSPVM  +E  V +   ++  G  I+Y  TPIY 
Sbjct:   88 HPNQRNTSSAAPGKDPHPP-SVDPAGWQ---SGQGYNRAHLLAAVLGGANNDKRNFVTMHAYANSPVMRGFELRVRD---AVKAGENILYRATPIYS 177          
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A2U9P311 (Type IV secretion protein Rhs n=1 Tax=Streptomyces actuosus TaxID=1885 RepID=A0A2U9P311_STRAS)

HSP 1 Score: 72.4 bits (176), Expect = 4.500e-10
Identity = 55/172 (31.98%), Postives = 84/172 (48.84%), Query Frame = 0
Query:  161 PSGLHLIDAANVLAFSQHGGFLANRGFDDEQKNLDVHACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIY-EEPALYPINIRMRAV-RRGFRI------FGVLYDLIIWN 324
            P GL   D  +V      GG +         +   +HA + Q   + L    SP   + P+GW+   +G    R +L+AA +GGS+KD RNFVT H+YANSPVM   E  +     ++  G  I+Y++ PIY ++ A  P+ + + A   +GF +       G    + IWN
Sbjct: 1420 PLGLKPCDEGDVT----WGGRVQYGQLGPHNRATSMHATIAQ---DMLGGKTSP--QVDPAGWE---SGKGYNRAHLLAAMIGGSNKDPRNFVTMHSYANSPVMRQIELQIRN---AVKDGEIILYSVIPIYADDKAKIPLGVTIEAYGSKGFEMRPHGSDSGGTNSVTIWN 1576          
BLAST of Ggra7532.t1 vs. uniprot
Match: A0A100J153 (Putative deoxyribonuclease RhsC n=8 Tax=Streptomyces TaxID=1883 RepID=A0A100J153_9ACTN)

HSP 1 Score: 70.5 bits (171), Expect = 1.890e-9
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0
Query:  217 SIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIY-EEPALYPINIRMRA 306
            S+ P+GW   A+G    R +L+AA +GGS+KD RNFVT H+YANSPVM   E L     +  D+ + I Y++TPIY +  A  P+ + + A
Sbjct: 1450 SVDPAGW---ASGQGYNRAHLLAAMIGGSNKDPRNFVTMHSYANSPVMRQVE-LQIRNAVKNDNEI-IQYSVTPIYADHHAKIPLGVTIEA 1535          
BLAST of Ggra7532.t1 vs. uniprot
Match: DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces sp. HSG2 TaxID=2797167 RepID=UPI00190664B4 (DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces sp. HSG2 TaxID=2797167 RepID=UPI00190664B4)

HSP 1 Score: 70.5 bits (171), Expect = 2.020e-9
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 0
Query:  186 GFDDEQKNLDVHACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPINIRM 304
            G D   +   V A +T ++        SP  S+ P+GW+   +G    R +L+AA LGG + D RNFVT HAYANSPVM  +E  V +   ++  G  I+Y  TPIY      P+ + +
Sbjct: 2529 GLDQSGRATGVEAMLTPSNIGGKT---SP--SVDPAGWQ---SGQGYNRAHLLAAVLGGVNNDKRNFVTMHAYANSPVMRGFELQVRD---AVKAGENILYRATPIYSGSNPLPLGVTL 2636          
BLAST of Ggra7532.t1 vs. uniprot
Match: DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces albidochromogenes TaxID=329524 RepID=UPI00110FB81E (DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces albidochromogenes TaxID=329524 RepID=UPI00110FB81E)

HSP 1 Score: 68.9 bits (167), Expect = 4.330e-9
Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 0
Query:  188 DDEQKNLDVHACMTQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPINIRMRA 306
            D+  +   +HA + +    A   D  P G+  P GW   A      R +L+ A+LGGS+ D  NFVT HAYANSPVM   E  V +   +++ G TI Y++TP+Y+     P  +R+ A
Sbjct:  455 DEHGRPTAMHATLGKDMMGANPTD--PHGN--PPGW---AKDQGYNRAHLLGAQLGGSNFDPANFVTMHAYANSPVMRHIENQVRK---AVEAGETIQYSVTPVYDGSRPIPTGVRIDA 563          
BLAST of Ggra7532.t1 vs. uniprot
Match: DUF6531 domain-containing protein n=1 Tax=Streptomyces sp. BH-MK-02 TaxID=2880933 RepID=UPI001D0A24C9 (DUF6531 domain-containing protein n=1 Tax=Streptomyces sp. BH-MK-02 TaxID=2880933 RepID=UPI001D0A24C9)

HSP 1 Score: 68.9 bits (167), Expect = 5.960e-9
Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 0
Query:  215 GGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDARNFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEP-ALYPINIRMRAV-RRGFRIF------GVLYDLIIWN 324
            G  + P+GW+   +G    R +L+AA +GGS+KD RNFVT H+YANSPVM   E  V   +   D+   I Y++ PIY +  A  P+ + + A   +GF +       G    + IWN
Sbjct: 1450 GPKVDPAGWE---SGKGYNRAHLLAAMIGGSNKDPRNFVTMHSYANSPVMRQVELQVRNAV--RDNDEIIQYSVKPIYADGNAKIPLGVTIEAHGNKGFTMHPHGSDSGGTNSVTIWN 1562          
The following BLAST results are available for this feature:
BLAST of Ggra7532.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2S1Z9493.690e-1139.81Endonuclea_NS_2 domain-containing protein n=1 Tax=... [more]
A0A0C1Y2R71.060e-1041.11Type IV secretion protein Rhs n=1 Tax=Streptomyces... [more]
A0A0M8V5391.070e-1040.68Type IV secretion protein Rhs n=1 Tax=Streptomyces... [more]
A0A0N0HHB91.420e-1040.00Type IV secretion protein Rhs n=3 Tax=Streptomyces... [more]
DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces spongiicola TaxID=1690221 RepID=UPI00155839581.860e-1043.30DNA/RNA non-specific endonuclease n=1 Tax=Streptom... [more]
A0A2U9P3114.500e-1031.98Type IV secretion protein Rhs n=1 Tax=Streptomyces... [more]
A0A100J1531.890e-943.96Putative deoxyribonuclease RhsC n=8 Tax=Streptomyc... [more]
DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces sp. HSG2 TaxID=2797167 RepID=UPI00190664B42.020e-936.97DNA/RNA non-specific endonuclease n=1 Tax=Streptom... [more]
DNA/RNA non-specific endonuclease n=1 Tax=Streptomyces albidochromogenes TaxID=329524 RepID=UPI00110FB81E4.330e-936.97DNA/RNA non-specific endonuclease n=1 Tax=Streptom... [more]
DUF6531 domain-containing protein n=1 Tax=Streptomyces sp. BH-MK-02 TaxID=2880933 RepID=UPI001D0A24C95.960e-937.29DUF6531 domain-containing protein n=1 Tax=Streptom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044927Type VII secretion system protein EssD-likePFAMPF13930Endonuclea_NS_2coord: 202..306
e-value: 9.3E-12
score: 45.3
IPR044929DNA/RNA non-specific endonuclease superfamilyGENE3D3.40.570.10Extracellular Endonuclease, subunit Acoord: 168..328
e-value: 3.2E-21
score: 77.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:318839..321010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7532.t1Ggra7532.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 318839..321010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7532.t1 ID=Ggra7532.t1|Name=Ggra7532.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MSELSVSKVKFRDSPSGAGLTNSISGRLYKRSEKDERLILLKRALEGGRF
TGNHDEEAVNFAVSYESRGVTPCKPQGLAELDTMICDIFRQYGVNDFRLW
FDNIYTSGAAPHMAGQEWVQHGLSPYAFSVVLVLGGASVAHGFSFHVDEI
GIFEFNTTVRPSGLHLIDAANVLAFSQHGGFLANRGFDDEQKNLDVHACM
TQASYNALRKDKSPGGSIKPSGWKQLANGPRRQRCYLIAARLGGSHKDAR
NFVTCHAYANSPVMACYERLVAEKLISLDHGLTIVYAITPIYEEPALYPI
NIRMRAVRRGFRIFGVLYDLIIWNSDLNGVRVKFVCVGSLDQPGPPSLPR
RRIERSSSPCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044927Endonuclea_NS_2
IPR044929DNA/RNA_non-sp_Endonuclease_sf