Ggra7509.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7509.t1
Unique NameGgra7509.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length331
Homology
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BLAST of Ggra7509.t1 vs. uniprot
Match: R7QR71 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR71_CHOCR)

HSP 1 Score: 256 bits (655), Expect = 2.520e-81
Identity = 128/265 (48.30%), Postives = 179/265 (67.55%), Query Frame = 0 
Query:   24 MQLVAACVTVVQSSTGGCGRLFYYIAFGLTVVHDTFTGLVIPASLLWVIAELFKRSRNTEALLAAVVGTLWYGPERVHSAIHNL--VILRKRYLLVGAALGPYSRVAEHTGVDGEKLDEPLPVVRQLRWAPWWSEQERQSQVWWNGRVIST--GNIIEMRDSQIRALARKRIAMAITGKFDETALRLWCTAIVADQARFSRSLLNKVTGVQYWKLVFGGHEGKQLRIAVEENWKEWTGDEWSRLGAVVEGIRGRGLDYVKQEGWV 284
            MQ+ +A    VQ+S G CGR  YY+AF + V H+ F G+ +P SL+W   EL    R  +ALLAA+VG+LWYGPERV ++I NL  V  RK  LL  AA+G Y R+A   GV+ E L EPL V R LR+APWWS +E+++  +WNGRV  T  G+++ +RD Q+RA+AR+ I MA++G++DE+ LR WC  ++ADQARF+ S L  V   + W LV  G+EGK +  + EE+  +W+ DE  RLG V +GIR + L YV+++GW+
Sbjct:    1 MQIASALTRAVQNSDGRCGRCVYYVAFVINVAHELFIGIAVPVSLVWTAHELLVGERGLDALLAAIVGSLWYGPERVQNSIANLCNVCTRKGILL--AAIGKYHRIAMQKGVNDETLTEPLRVTRMLRFAPWWSWKEKKADKYWNGRVKKTESGHVV-LRDVQLRAIARQGIVMALSGEYDESKLRYWCAGMIADQARFAPSKLQSVNQHENWALVLDGYEGKYINQSFEEHKIDWSLDERKRLGTVADGIRKKSLRYVREQGWL 262
The following BLAST results are available for this feature:
BLAST of Ggra7509.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QR712.520e-8148.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..330
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..330
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 50..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:237619..238611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7509.t1Ggra7509.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 237619..238611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7509.t1 ID=Ggra7509.t1|Name=Ggra7509.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=331bp
MEESSSQNSERVVAAAFLVTVVSMQLVAACVTVVQSSTGGCGRLFYYIAF
GLTVVHDTFTGLVIPASLLWVIAELFKRSRNTEALLAAVVGTLWYGPERV
HSAIHNLVILRKRYLLVGAALGPYSRVAEHTGVDGEKLDEPLPVVRQLRW
APWWSEQERQSQVWWNGRVISTGNIIEMRDSQIRALARKRIAMAITGKFD
ETALRLWCTAIVADQARFSRSLLNKVTGVQYWKLVFGGHEGKQLRIAVEE
NWKEWTGDEWSRLGAVVEGIRGRGLDYVKQEGWVSSSNPSLIFERSNDDS
CTNLDRGPGNLVPTESTEPTEPTIPSDSTV*
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