Ggra7509.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7509.t1
Unique NameGgra7509.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length331
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:237619..238611 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7509Ggra7509Gracilaria gracilis GNS1m malegenetig00000102_pilon 237619..238611 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7509.t1.stop1Ggra7509.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000102_pilon 237619..237621 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7509.t1.CDS1Ggra7509.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000102_pilon 237619..238611 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7509.t1.exon1Ggra7509.t1.exon1Gracilaria gracilis GNS1m maleexontig00000102_pilon 237619..238611 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7509.t1.start1Ggra7509.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000102_pilon 238609..238611 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7509.t1Ggra7509.t1Gracilaria gracilis GNS1m malepolypeptidetig00000102_pilon 237619..238611 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7509.t1 ID=Ggra7509.t1|Name=Ggra7509.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=331bp
MEESSSQNSERVVAAAFLVTVVSMQLVAACVTVVQSSTGGCGRLFYYIAF
GLTVVHDTFTGLVIPASLLWVIAELFKRSRNTEALLAAVVGTLWYGPERV
HSAIHNLVILRKRYLLVGAALGPYSRVAEHTGVDGEKLDEPLPVVRQLRW
APWWSEQERQSQVWWNGRVISTGNIIEMRDSQIRALARKRIAMAITGKFD
ETALRLWCTAIVADQARFSRSLLNKVTGVQYWKLVFGGHEGKQLRIAVEE
NWKEWTGDEWSRLGAVVEGIRGRGLDYVKQEGWVSSSNPSLIFERSNDDS
CTNLDRGPGNLVPTESTEPTEPTIPSDSTV*
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spliced messenger RNA

>Ggra7509.t1 ID=Ggra7509.t1|Name=Ggra7509.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=993bp|location=Sequence derived from alignment at tig00000102_pilon:237619..238611- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGAAAGTTCTTCGCAAAACAGTGAGCGGGTAGTTGCGGCCGCCTT
TCTGGTCACTGTGGTGTCAATGCAGCTTGTGGCGGCCTGCGTAACTGTGG
TGCAAAGCTCGACTGGAGGATGTGGCCGTTTGTTCTATTACATTGCTTTT
GGGCTAACTGTTGTGCATGACACATTCACTGGTCTAGTAATTCCAGCCAG
TCTATTGTGGGTAATTGCTGAGCTATTCAAAAGGAGCCGCAATACAGAAG
CCCTGTTAGCCGCTGTCGTTGGTACGCTATGGTACGGACCGGAGCGTGTA
CACTCTGCAATTCACAACCTGGTGATTTTGCGGAAGCGATATCTGTTGGT
GGGCGCAGCTCTCGGACCGTATTCACGAGTGGCGGAGCACACTGGGGTGG
ACGGTGAAAAACTGGACGAGCCGTTACCGGTTGTCCGACAGCTCCGATGG
GCACCATGGTGGTCTGAGCAAGAAAGACAAAGTCAAGTATGGTGGAACGG
ACGCGTGATTAGCACGGGGAATATTATTGAGATGCGAGACTCACAGATAC
GTGCGTTGGCAAGAAAGCGGATTGCGATGGCAATAACAGGAAAGTTTGAT
GAAACTGCTTTGAGGTTGTGGTGTACAGCCATCGTGGCTGATCAGGCGCG
GTTTTCCAGAAGTTTGCTGAACAAGGTAACTGGCGTTCAATATTGGAAAC
TAGTTTTTGGGGGGCATGAGGGAAAACAGCTCAGAATTGCTGTAGAAGAA
AATTGGAAGGAGTGGACTGGGGACGAATGGAGCAGACTTGGGGCTGTGGT
TGAGGGAATCCGTGGCCGCGGTCTGGACTACGTCAAACAAGAGGGATGGG
TTTCTTCAAGCAACCCATCCCTCATTTTTGAACGATCGAACGATGACAGT
TGTACTAACTTGGATCGGGGGCCTGGAAATTTGGTACCGACAGAATCGAC
AGAACCAACAGAACCGACAATACCTTCAGATTCGACAGTATGA
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protein sequence of Ggra7509.t1

>Ggra7509.t1 ID=Ggra7509.t1|Name=Ggra7509.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=331bp
MEESSSQNSERVVAAAFLVTVVSMQLVAACVTVVQSSTGGCGRLFYYIAF
GLTVVHDTFTGLVIPASLLWVIAELFKRSRNTEALLAAVVGTLWYGPERV
HSAIHNLVILRKRYLLVGAALGPYSRVAEHTGVDGEKLDEPLPVVRQLRW
APWWSEQERQSQVWWNGRVISTGNIIEMRDSQIRALARKRIAMAITGKFD
ETALRLWCTAIVADQARFSRSLLNKVTGVQYWKLVFGGHEGKQLRIAVEE
NWKEWTGDEWSRLGAVVEGIRGRGLDYVKQEGWVSSSNPSLIFERSNDDS
CTNLDRGPGNLVPTESTEPTEPTIPSDSTV*
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mRNA from alignment at tig00000102_pilon:237619..238611-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7509.t1 ID=Ggra7509.t1|Name=Ggra7509.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=993bp|location=Sequence derived from alignment at tig00000102_pilon:237619..238611- (Gracilaria gracilis GNS1m male)
ATGGAAGAAAGTTCTTCGCAAAACAGTGAGCGGGTAGTTGCGGCCGCCTT
TCTGGTCACTGTGGTGTCAATGCAGCTTGTGGCGGCCTGCGTAACTGTGG
TGCAAAGCTCGACTGGAGGATGTGGCCGTTTGTTCTATTACATTGCTTTT
GGGCTAACTGTTGTGCATGACACATTCACTGGTCTAGTAATTCCAGCCAG
TCTATTGTGGGTAATTGCTGAGCTATTCAAAAGGAGCCGCAATACAGAAG
CCCTGTTAGCCGCTGTCGTTGGTACGCTATGGTACGGACCGGAGCGTGTA
CACTCTGCAATTCACAACCTGGTGATTTTGCGGAAGCGATATCTGTTGGT
GGGCGCAGCTCTCGGACCGTATTCACGAGTGGCGGAGCACACTGGGGTGG
ACGGTGAAAAACTGGACGAGCCGTTACCGGTTGTCCGACAGCTCCGATGG
GCACCATGGTGGTCTGAGCAAGAAAGACAAAGTCAAGTATGGTGGAACGG
ACGCGTGATTAGCACGGGGAATATTATTGAGATGCGAGACTCACAGATAC
GTGCGTTGGCAAGAAAGCGGATTGCGATGGCAATAACAGGAAAGTTTGAT
GAAACTGCTTTGAGGTTGTGGTGTACAGCCATCGTGGCTGATCAGGCGCG
GTTTTCCAGAAGTTTGCTGAACAAGGTAACTGGCGTTCAATATTGGAAAC
TAGTTTTTGGGGGGCATGAGGGAAAACAGCTCAGAATTGCTGTAGAAGAA
AATTGGAAGGAGTGGACTGGGGACGAATGGAGCAGACTTGGGGCTGTGGT
TGAGGGAATCCGTGGCCGCGGTCTGGACTACGTCAAACAAGAGGGATGGG
TTTCTTCAAGCAACCCATCCCTCATTTTTGAACGATCGAACGATGACAGT
TGTACTAACTTGGATCGGGGGCCTGGAAATTTGGTACCGACAGAATCGAC
AGAACCAACAGAACCGACAATACCTTCAGATTCGACAGTATGA
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Coding sequence (CDS) from alignment at tig00000102_pilon:237619..238611-

>Ggra7509.t1 ID=Ggra7509.t1|Name=Ggra7509.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=993bp|location=Sequence derived from alignment at tig00000102_pilon:237619..238611- (Gracilaria gracilis GNS1m male)
ATGGAAGAAAGTTCTTCGCAAAACAGTGAGCGGGTAGTTGCGGCCGCCTT
TCTGGTCACTGTGGTGTCAATGCAGCTTGTGGCGGCCTGCGTAACTGTGG
TGCAAAGCTCGACTGGAGGATGTGGCCGTTTGTTCTATTACATTGCTTTT
GGGCTAACTGTTGTGCATGACACATTCACTGGTCTAGTAATTCCAGCCAG
TCTATTGTGGGTAATTGCTGAGCTATTCAAAAGGAGCCGCAATACAGAAG
CCCTGTTAGCCGCTGTCGTTGGTACGCTATGGTACGGACCGGAGCGTGTA
CACTCTGCAATTCACAACCTGGTGATTTTGCGGAAGCGATATCTGTTGGT
GGGCGCAGCTCTCGGACCGTATTCACGAGTGGCGGAGCACACTGGGGTGG
ACGGTGAAAAACTGGACGAGCCGTTACCGGTTGTCCGACAGCTCCGATGG
GCACCATGGTGGTCTGAGCAAGAAAGACAAAGTCAAGTATGGTGGAACGG
ACGCGTGATTAGCACGGGGAATATTATTGAGATGCGAGACTCACAGATAC
GTGCGTTGGCAAGAAAGCGGATTGCGATGGCAATAACAGGAAAGTTTGAT
GAAACTGCTTTGAGGTTGTGGTGTACAGCCATCGTGGCTGATCAGGCGCG
GTTTTCCAGAAGTTTGCTGAACAAGGTAACTGGCGTTCAATATTGGAAAC
TAGTTTTTGGGGGGCATGAGGGAAAACAGCTCAGAATTGCTGTAGAAGAA
AATTGGAAGGAGTGGACTGGGGACGAATGGAGCAGACTTGGGGCTGTGGT
TGAGGGAATCCGTGGCCGCGGTCTGGACTACGTCAAACAAGAGGGATGGG
TTTCTTCAAGCAACCCATCCCTCATTTTTGAACGATCGAACGATGACAGT
TGTACTAACTTGGATCGGGGGCCTGGAAATTTGGTACCGACAGAATCGAC
AGAACCAACAGAACCGACAATACCTTCAGATTCGACAGTATGA
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