Ggra7490.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7490.t1
Unique NameGgra7490.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length313
Homology
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BLAST of Ggra7490.t1 vs. uniprot
Match: A0A2V3IQ56 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ56_9FLOR)

HSP 1 Score: 90.9 bits (224), Expect = 1.170e-17
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 0 
Query:  217 ANFSKKSMQPPFNPSVSTVGFVGAIATVIVAAFLVWSKSSNSSLSPVQLASHAYQRVRSGAQDHNVSAQSSADADGWNAGWDDDDDWNPEAPSAKV 312
            A  + + ++ P NPSVSTV  +GA  TV++  ++VWSKSS  +    Q   H Y  V +  +    +A + ADADGWNAGW+DD+DW P A + KV
Sbjct:  170 APSADQRLKTPINPSVSTVAIIGAAITVLIGVYVVWSKSSRGATQATQSDDHTYHPVDTDPRADGAAAPNEADADGWNAGWEDDEDWEPTAAANKV 265
The following BLAST results are available for this feature:
BLAST of Ggra7490.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ561.170e-1743.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..312
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 253..312
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..252
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 231..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:173841..174779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7490.t1Ggra7490.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 173841..174779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7490.t1 ID=Ggra7490.t1|Name=Ggra7490.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=313bp
MSRELLCVALFVLIVVTHAAPVAPSLPHASVERAVVRRRHAHHVAFVIRA
AQLAVPGHEEGDGLESAAAAEGANHTDVGKGDAAVAENETAQNEGQHTLP
TGSETKESDTKPSEAKQSDTQAGATQQGKPQQGKPQQSVPEQSETQQNET
QQNETQQNETQQNETQQNEPQQSEPQQSTTQQSEPQQNDTISDPRTQSDE
NAQLEQPLQAQQAQDGANFSKKSMQPPFNPSVSTVGFVGAIATVIVAAFL
VWSKSSNSSLSPVQLASHAYQRVRSGAQDHNVSAQSSADADGWNAGWDDD
DDWNPEAPSAKV*
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