Ggra7488.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7488.t1
Unique NameGgra7488.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length178
Homology
BLAST of Ggra7488.t1 vs. uniprot
Match: R7Q6P3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P3_CHOCR)

HSP 1 Score: 190 bits (483), Expect = 8.840e-59
Identity = 96/114 (84.21%), Postives = 106/114 (92.98%), Query Frame = 0
Query:   62 DRNDGRGTSSLFGIRLKTNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSD 175
            DRNDGR TSS+FG++LKTNGDVIKFGFAA+A+ YAIK+ +Q+ G PDLLAGQLTT F SVF+LLAWVSTYLFRVG+KGMTYAQQLREYEDEVIKKRYEELTEEELAALGEEL D
Sbjct:   67 DRNDGRATSSMFGMKLKTNGDVIKFGFAAVAIAYAIKSIIQLLGAPDLLAGQLTTGFFSVFALLAWVSTYLFRVGTKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELED 180          
BLAST of Ggra7488.t1 vs. uniprot
Match: A0A2V3ISX4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISX4_9FLOR)

HSP 1 Score: 180 bits (456), Expect = 1.140e-54
Identity = 104/175 (59.43%), Postives = 126/175 (72.00%), Query Frame = 0
Query:    9 PALTCVSTSTKSSSLIRPFKPGTAKGAACHFNRTRRALRSSIRMAEERNQSAPDRNDGRGTSS------LFGIRLKTNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDEA 177
            PALT  S ++ +++L    KP        H    R    S + MAE+  ++ P++ D             FGIRLKTNGDVIKFGF AIA+VYAIKTG+Q+AGVPDLLAGQLTT FVS+F+LLAW+STYLFRVG+K MTYAQQLR+YE+ VIKKRYEEL+EEELAAL EELS +A
Sbjct:   16 PALTSTSFTSSANAL----KPTFHTQKCRHVENVRI---SPVCMAEDGQKTTPEKFDASDMPKRPEPPGFFGIRLKTNGDVIKFGFVAIAIVYAIKTGIQLAGVPDLLAGQLTTGFVSIFALLAWISTYLFRVGTKNMTYAQQLRDYENAVIKKRYEELSEEELAALSEELSGDA 183          
BLAST of Ggra7488.t1 vs. uniprot
Match: A0A1X6NTN7 (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTN7_PORUM)

HSP 1 Score: 119 bits (297), Expect = 5.610e-31
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:   77 LKTNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDE 176
            L+TNGDVIKFG A +   +A K  L+ AG+PDL AGQLTT  VSV  L+ WV TY +RVGSK MTYA QLREYE  VI KRY ELT EEL AL EEL  E
Sbjct:   53 LRTNGDVIKFGAALLVGAFAFKAVLEAAGIPDLKAGQLTTGLVSVTGLVGWVGTYFYRVGSKKMTYATQLREYEAGVIAKRYAELTPEELDALAEELESE 152          
BLAST of Ggra7488.t1 vs. uniprot
Match: A0A5J4Z7V0 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7V0_PORPP)

HSP 1 Score: 100 bits (250), Expect = 6.870e-24
Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = 0
Query:   57 NQSAPDRNDGRGTSSLFGIRLKTNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDE 176
            + +A  ++D RG          TNGDV+K+G    A  + +   LQ  G+    AG +T+  + + S+LAW STY+FRV +K MTYAQQL++YE+ VI+KR+EEL+EEEL AL  EL DE
Sbjct:   43 HMAADSKSDKRGV---------TNGDVLKYGVLGTAACFGVYFALQATGMDSNQAGTVTSGVLGIGSVLAWTSTYIFRVANKDMTYAQQLKDYENAVIQKRFEELSEEELEALAAELEDE 153          
BLAST of Ggra7488.t1 vs. uniprot
Match: uncharacterized protein LOC110823455 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D06DE (uncharacterized protein LOC110823455 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D06DE)

HSP 1 Score: 91.3 bits (225), Expect = 2.260e-19
Identity = 55/138 (39.86%), Postives = 80/138 (57.97%), Query Frame = 0
Query:   39 FNRTRRALRSSIRMAEERNQSAPDRNDGRGTSSLFGIRLKTNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDE 176
            FNR ++ +    R +   N S  + N    T + FG   K   DV+  G     L   +K+GL+ AGV  L AG +    + +   + W+STY+FRV +K MTYAQQLR+YE++V++KR E LTE EL AL E++ +E
Sbjct:   92 FNRQKKVIFIIPRCSNSSNSSGSEENASDETKTPFGYSRK---DVLLIGLGVTVLGVGLKSGLEFAGVDPLQAGNVVQLVMVLGLTVGWISTYIFRVSNKEMTYAQQLRDYENKVMEKRLEGLTEAELEALLEQVEEE 226          
BLAST of Ggra7488.t1 vs. uniprot
Match: V4UFJ2 (Uncharacterized protein n=6 Tax=Citrus TaxID=2706 RepID=V4UFJ2_CITCL)

HSP 1 Score: 89.4 bits (220), Expect = 5.250e-19
Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 0
Query:   57 NQSAPDRNDGRGTSSLFGIRLKTNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDE 176
            N +  D +D   T + FG    T  DV+  G     + Y +K+GL++ GV  L AG +    V +   L WVSTY+FRV +K MTYAQQLR+YED+V++KR E LTE EL AL E++ +E
Sbjct:   71 NSNGSDSSDQ--TETPFGY---TRKDVLLIGVGVTVIGYGLKSGLELFGVDPLQAGNVVEVIVVLGLTLGWVSTYIFRVSNKEMTYAQQLRDYEDKVMQKRLEGLTEAELEALIEQVEEE 185          
BLAST of Ggra7488.t1 vs. uniprot
Match: A0A087HAG6 (Uncharacterized protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087HAG6_ARAAL)

HSP 1 Score: 87.4 bits (215), Expect = 2.580e-18
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   66 GRGTSSLFGIRLKTNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDE 176
            G+ T + FG    T  DV+  G    AL   ++TGL+  GV  L AG      + +   L W+STY+FRVG+K MTYAQQLR+YE +V++KR E L+E EL AL E++ +E
Sbjct:   80 GKKTKTPFGY---TRKDVLLIGVGVTALGIGLETGLEYVGVDPLQAGNAVQLILVLGLTLGWISTYIFRVGNKEMTYAQQLRDYESQVMQKRLESLSEAELEALMEQVDEE 187          
BLAST of Ggra7488.t1 vs. uniprot
Match: A0A251L1D7 (Uncharacterized protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A251L1D7_MANES)

HSP 1 Score: 87.8 bits (216), Expect = 2.650e-18
Identity = 54/141 (38.30%), Postives = 82/141 (58.16%), Query Frame = 0
Query:   42 TRRALRSSIRMAEERNQSAPDR------NDGRGTSSLFGIRLKTNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDE 176
            +RR +   ++    R+ S+ D       + G+G  + FG    T  DV+  G     L   +K+GL+ AGV  L AG +    + +   + W+STY+FRV +K MTYAQQLR+YE++V++KR E LTE EL AL E++ +E
Sbjct:   60 SRRMMSKKVKFIIPRSSSSSDXXXNEDGSSGQGKQTPFGY---TRKDVLLIGVGVTVLGIGLKSGLEFAGVDSLQAGNVVQLVLVLGLTVGWISTYIFRVSNKEMTYAQQLRDYENKVMQKRLEGLTEAELEALLEQVEEE 197          
BLAST of Ggra7488.t1 vs. uniprot
Match: A0A6J1IDW5 (uncharacterized protein LOC111471752 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IDW5_CUCMA)

HSP 1 Score: 87.4 bits (215), Expect = 3.880e-18
Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 0
Query:   79 TNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDE 176
            T  DV+  G     L + +K+GL+ AG   + AG +    + +   LAW+STY+FRV +K MTYAQQLR+YED+V++KR E LTE EL AL E++ +E
Sbjct:  102 TRKDVLLIGLGVTVLGFGLKSGLEFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYEDKVMEKRLESLTEAELVALLEQVEEE 199          
BLAST of Ggra7488.t1 vs. uniprot
Match: A0A1S3BX71 (uncharacterized protein LOC103494194 n=4 Tax=Benincaseae TaxID=1003877 RepID=A0A1S3BX71_CUCME)

HSP 1 Score: 87.4 bits (215), Expect = 3.880e-18
Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   79 TNGDVIKFGFAAIALVYAIKTGLQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYEDEVIKKRYEELTEEELAALGEELSDE 176
            T  DV+  G     L + +K+GL+ AG   + AG +    + +   L W+STY+FRV SK MTYAQQLR+YED+V++KR E LTE EL AL E++ +E
Sbjct:  102 TRKDVLLIGLGVTVLGFGLKSGLEYAGYDSMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELVALLEQVEEE 199          
The following BLAST results are available for this feature:
BLAST of Ggra7488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q6P38.840e-5984.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ISX41.140e-5459.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NTN75.610e-3165.00Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A5J4Z7V06.870e-2445.83Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
uncharacterized protein LOC110823455 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D06DE2.260e-1939.86uncharacterized protein LOC110823455 n=1 Tax=Caric... [more]
V4UFJ25.250e-1945.00Uncharacterized protein n=6 Tax=Citrus TaxID=2706 ... [more]
A0A087HAG62.580e-1845.05Uncharacterized protein n=2 Tax=Arabis TaxID=50451... [more]
A0A251L1D72.650e-1838.30Uncharacterized protein n=4 Tax=Crotonoideae TaxID... [more]
A0A6J1IDW53.880e-1846.94uncharacterized protein LOC111471752 n=3 Tax=Cucur... [more]
A0A1S3BX713.880e-1846.94uncharacterized protein LOC103494194 n=4 Tax=Benin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021562Protein of unknown function DUF3007PFAMPF11460DUF3007coord: 80..173
e-value: 1.2E-24
score: 86.3
IPR021562Protein of unknown function DUF3007PANTHERPTHR35734OS01G0805200 PROTEINcoord: 42..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..133
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 83..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:171659..172192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7488.t1Ggra7488.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 171659..172192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7488.t1 ID=Ggra7488.t1|Name=Ggra7488.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=178bp
MPLHFAFVPALTCVSTSTKSSSLIRPFKPGTAKGAACHFNRTRRALRSSI
RMAEERNQSAPDRNDGRGTSSLFGIRLKTNGDVIKFGFAAIALVYAIKTG
LQVAGVPDLLAGQLTTAFVSVFSLLAWVSTYLFRVGSKGMTYAQQLREYE
DEVIKKRYEELTEEELAALGEELSDEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021562DUF3007