Ggra7471.t2 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A2V3IGU4 (Pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGU4_9FLOR) HSP 1 Score: 687 bits (1774), Expect = 2.660e-235 Identity = 381/786 (48.47%), Postives = 510/786 (64.89%), Query Frame = 0
Query: 28 CTRSPSLNQRSIQARQARP-RISPDIHRATTLRKAGELHKAYDVLNSALPHVRQHVAYNRELIRTTAALIAQSSS----------VESAEQLWFALERILRGDCS-RPDSFTFNSLLSALRVLDAERNLPQHAQQHEKLDVLRLAKVVFDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQIL-ERMRRRDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCGETEKVQSLFDEIENDEHLEIDAVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPLDSKAYGLLLSILFEFGEREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHENCVKLFNHMKEKRVLPDKITYTTMIRVFSRAGLLDRAFRLLGEMQDLGLAISDMYAWTSLMDGCRRCGQWQRAVELLAFMKKHSSEYEHSLVPSPSTACYNAALYAAGIGGEDWRTSVKIYESLLADQTQQPDYVTYSAMASIILRKRHRISEWHIVMQVSQALEDLLLEHSKPPDETRKRRDTIEGLDRGLNKTMRKKLLSKMSSLKELIE 800
CTR + + +AR+ P R++ + RA LRK G L A DVL S R+HV+Y ELIR TAAL Q + +A+QLW L ++L+ DC PD+ TFN+L SAL V +R + A L++AK+ F+ M + V D +TMSILF++C D YA LFE+QA+ +GF PN++SG ++L A+AK++S +V+RV+++L+ VPFNER YT IISA LK G HAQVLH+F AI S V P+VFLFSG LTSCLRV D NALR+ Q M ++VHPT+PILN++ ELA+R+ R+G+ Y+ +WAP++ CD YD++I+SWK+ T + +T A+Y LL ++E++ ++ P STYNAAI+TL +HG+ EQ +QI+ +R+ R + LS + V+SL E++ D LE+D RC QLKLYRI+++ ++AL+LH TQ++GKPLDS AYGLLL+ILFE G RE+AISLFGWL+W IYNVMI N+ ++ E CV+LFNHMK K +LP+ ITYT MIR +S+AGLLDRAFR+LGEMQD+GLA+SDMYAWT LMDGCRR GQWQRAVELL FM+ ++ E SLVP PSTACYNAALYAAGIGG DW+ +V I+ESL+ D+ +PD VT+SAMASIIL+ R +SEWHIV +V +LE+L + ++R IEG +R L+ RKKLL+K+ LK LIE
Sbjct: 32 CTRVRCASDKG-RARRTPPFRVASQVRRAAALRKEGNLRDAKDVLGSVSNAQRRHVSYVNELIRVTAALELQQRQRRRRRDSNHLISNAKQLWHLLWQLLK-DCQVLPDTGTFNALFSALSVW--QRVVKDDA-------ALQVAKLGFELMNEFDVVADHYTMSILFSLCEKPEDVHYARLFERQAIARYGFVPNVISGCAMLNAYAKASSFSDVNRVISLLKAASVPFNERIYTVIISAFLKQGHHAQVLHHFALAIDSQHVKPSVFLFSGALTSCLRVRDSNNALRILQQMRQERVHPTQPILNLIFELAIRTADFRIGLGYLLEWAPQHGLVCDHRHYDRIISSWKRAQTRVDETVRAVYTLLDHVESASDVIPQTSTYNAAISTLISHGHFEQAQQIVFQRIPSRKLSPDGVTYNALIHCYGKAGKPGRAFQVIQTMKQNNIQPNQVTYNTIIEILLSFRMIDLVKSLLSEMKKDPRLEMDENVRCSQLKLYRIEKDVRSALRLHAFTQQIGKPLDSMAYGLLLTILFECGHREEAISLFGWLLWKTSTEARIYNVMIDNMALLDDNCETCVRLFNHMKWKGILPNTITYTIMIRTYSKAGLLDRAFRMLGEMQDVGLAMSDMYAWTVLMDGCRRFGQWQRAVELLRFMQTRNASGECSLVPRPSTACYNAALYAAGIGGRDWKQAVSIFESLVDDEVHRPDAVTFSAMASIILQNRRDVSEWHIVQRVYDSLEELATGDTARLGVVEQKR--IEGSNRKLDAPERKKLLAKLGRLKTLIE 804
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A816QUF3 (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816QUF3_9BILA) HSP 1 Score: 73.9 bits (180), Expect = 7.050e-10 Identity = 102/506 (20.16%), Postives = 206/506 (40.71%), Query Frame = 0
Query: 159 LAKVVFDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDF--GFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQA-ISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRP---ILNVMLELALRSGSVR--------LGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALY-----------------DLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRRRDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCGETEKVQSLFDEIENDEHLEIDAVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPL----------DSKAYGLLLSILFEFGEREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHE-NCVKLFNHMKEKRVLPDKITYTTMIRVFSRAGLL 622
+A+ VFD + ++ ++PD FT++ILF CA A+ R A ++ +D+ ++ N+V S + K ++ +R+ +++ + TY II ++ + L F+Q ++ SVT ++ V +C ++++ A+++ + + +K R I +++ ++ G V + K + + + +++K + +++ ++++ +A+ +LL M +Y NI+T N+AI L G++E E+I ++ +DI+ EK LF++I+ +E+ V Y I N A L ++ ++GK L D+ + +L FG+ E A +F + + IY ++ G NG C K+F MKEK V+PD+I + +I S++G+L
Sbjct: 145 MAEKVFDLLDEMDIKPDSFTLAILFKACAELANDR-AIKIGRKLLDEMPENYRNNVVVLNSAMHMLMKFGDIQSAERIFRSNKKKDII----TYNAIIKGYVGNEMFERALDLFEQIHLNFDSVT-----YTVVFNACAGLAND-RAMKIGKELLAKMPDNYRNDNIISTSAIDMLMKFGDVESAERIFRSIKTKNIITYGAMVKGYVGNEMFEKALDLFEQIHLSLTNVIYAIAFNCCAKLCNDRAMKIGKELLAKMPENYR-NDNITT-NSAIDMLMKFGDVESAERIFRSIKAKDIITYGAMVKGYVGNEMF---------------------------------------EKALDLFEQID----IELGDVT-------YSIAFNCCAKL-CNDRAMKIGKKLLAKMPENYRNDNITSTSAIDMLMRFGDVESAERMFRSI---KAKGTNIYGALMN--GYNLNGESWKCFKIFEEMKEKDVIPDEIAWNILIGACSKSGML 581
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A6J1I8T1 (putative pentatricopeptide repeat-containing protein At3g08820 n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1I8T1_CUCMA) HSP 1 Score: 69.3 bits (168), Expect = 2.070e-8 Identity = 51/260 (19.62%), Postives = 118/260 (45.38%), Query Frame = 0
Query: 164 FDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRR 423
F ++++G+RPD F++ + + CA D ++ + D G N+ TSLL + K ++E + + N + ++ + +++T+I + G Q L F Q + S ++ P+ + GVL++C R+ + +M+ + + ++++ + GSV ++ F + D+V+ + +M+ A++ L +E + I+P+ +T+ + T G +++ + M+R
Sbjct: 203 FKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY-ISDCGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIV----SWSTMIQGYAFNGLPKQALDLFFQ-MQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDQHEFLSNPVLGTALIDMYSKCGSVTRA----------WEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVE-KHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKR 445
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A6P5Z3Q3 (putative pentatricopeptide repeat-containing protein At3g08820 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5Z3Q3_DURZI) HSP 1 Score: 65.5 bits (158), Expect = 3.230e-7 Identity = 66/296 (22.30%), Postives = 128/296 (43.24%), Query Frame = 0
Query: 133 SALRVLD--AERN-LPQHAQQHEKLDVLRLAKVV--FDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRR 423
+AL V D +E+N + A +DV R + V F +ID+G+RPD F++ + + CA D E+ + FG N+ TSL+ +AK ++E+ + + ++ + T++T++ + G + L F Q + + P+ + GVL++C R+ ++M+ + + ++++ + GS+ V W + F + D V+ + + M+ + L ME S I PN +T+ + T G ++ Q M R
Sbjct: 169 NALNVFDDISEKNVISWTAMISGYIDVGRYREAVDMFSKLIDMGLRPDSFSIVRVLSACAHLGDLNSGEWIER-CITQFGLSRNVFVATSLVDMYAKCGNMEKARCAFDGMPEKDIV----TWSTMVQGYASNGLPKEALDLFFQ-MQKEKLAPDCYSMVGVLSACARLGALELGDWASKLMDRDEFLSNPVLGTALIDMFAKCGSI------VQAW----EIFNSMKEKDLVVWNAAISGLAMNGHVKPAFGLFGQMEKS-GILPNENTFMGLLCGCTHVGLVDDGRQYFHGMNR 447
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A2I0WHW3 (Pentatricopeptide repeat-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WHW3_9ASPA) HSP 1 Score: 63.9 bits (154), Expect = 1.080e-6 Identity = 102/513 (19.88%), Postives = 203/513 (39.57%), Query Frame = 0
Query: 163 VFDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSC-----LRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRRRDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCGETEKVQSLFDEIENDEHLEIDAVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPLDSKAYGLLLSILFEFGEREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHENC-VKLFNHMKEKRVLPDKITYTTMIRVFSRAGLLDRAFRLLGEMQ-DLGLAISDMYAWTSLMDGCRRCGQWQRAVELLAFM 668
+F M+DLG+ P++FT+S + + C+ + L A+ K N +L+ FAK L RV + L ++ N+ +T +I+ + + G + F + + V P+ + S V+++C L + + ++L + +I V ++N+ + G + + V D P+++ V + +I+ + + N HAL L+ +E IKPN TY++ + N E +Q+ + + + + +E+ +F +IE+ +L +A L +LH ++G D L+S+ G E A S+F + + ++ + MI G ++G +C ++LF+ M + P+++TY ++ S GL+ ++ MQ D GL + M + ++D R G+ + A E + M
Sbjct: 159 IFLEMLDLGLIPNEFTISSVLHACSNPDFSKIGILLLGSAIKTGFCKRNASVAGALIDMFAKIGDLASARRVFDELLEK----NKVVWTLMITRYAQHGLCLDAVKLFVEFVFDDFV-PDQYSLSSVISACSELESLLLGKQLHSLAI-RIGFVSDVCVGCSLINMYAKCV--EGGAMVDSRKVFDRMPQHN----VMSWTAIISGYVQGDRNDE---HALSLFLKMLEGK--IKPNHFTYSSILKACANLSNAELGKQVYAHVIKSGLAFVNFVGNSLVTMFANSGRMEDACKAFEVLYEKNLVSYNALVDGY----VKNSNSEEAFDIFQQIES-MNLGANAFTFASLLSSAASIGVMSKGQKLHGQLLKMGYESDICINNALISMYSRCGNTEDACSVFDEMRYRNVIS---WTSMI--TGFAKHGEAHCALQLFHEMLSTGLRPNEVTYVAVLSACSHVGLVREGLKIFHSMQRDHGL-VPRMEHYACMVDLLGRSGRVEEAFEFITSM 643
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A200RDN1 (Pentatricopeptide repeat n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200RDN1_9MAGN) HSP 1 Score: 63.5 bits (153), Expect = 1.290e-6 Identity = 99/536 (18.47%), Postives = 194/536 (36.19%), Query Frame = 0
Query: 144 LPQHAQQHEKLDVLRLAKVVFDAMIDLGVRPDQFTMSILFNMCA----FRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKK-----TSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRRRDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCGETEKVQSLF-DEIENDEHLEIDAVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPLDSKAY--GLLLSILFEFGEREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHENCVKLFNHMKEK-RVLPDKITYTTMIRVFSRAGLLDRAFRLLGEMQDLGLAISDMYAWTSLMDGCRRCGQWQRAVELLA 666
L H ++ + L L + + +PD FT+ I CA R K L +K ++ G++L+ +AK + + V + V +T++I+ + + G + L +F + + +TP+ V++SC ++ + V ++N L L ++GS+R +Y+K + SW D +L++ Q +E Y+ PN T + + A GN+++ +I E +R+ L+ +S+ D D + + + C +L + AL LH + D K + L+ + + G E +I +F + Q +++ MI G G E ++ FN M E RV+P+ IT+ +++ S GL++ F++ EM ++ ++D R G+ +A+E ++
Sbjct: 74 LRSHCREKQWEVTLHLFNNMLSTTSTMSDKPDNFTVPIAIKACAGLLALRTGKTIHGLVKKNDK----INSDMFVGSALVELYAKCGEMGDALGVFEEFPEPDVVL----WTSMITGYQQNGNAEKALSFFSRMVMDEGLTPDRVTLVSVVSSCAQLMNLGAGKCVHGFTIKMGFDTDLSLVNSFLNLYAKTGSIRNARNLFEK------------MYEKDVISWSSMISCYAQNQKPDEALSLFN--QMVEKRYD--PNSVTLVSVLQACAAAGNVDEGRRIHELAKRKGCELDVSVSTALVDMYMKCSCIEKAVDLFKRMPQKDVVCWGAFISGYAQNGLANESLGIFRSMLSDGTRPDAVIMVKVLKACAELGIL------HQALCLH--CYLVSSGFDDKVFVGAALIDLYSKCGNLENSIRVFEGM---NQRDVVVWSSMIAGYGIHGFGSE-AIRTFNRMIESSRVIPNDITFLSILSACSHTGLVEEGFKIFDEMVHKYQIEPTSEHYSVMVDLLGRTGKLDKAMEFIS 573
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A6J1BK76 (putative pentatricopeptide repeat-containing protein At3g08820 n=4 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J1BK76_9ROSI) HSP 1 Score: 62.0 bits (149), Expect = 3.820e-6 Identity = 54/272 (19.85%), Postives = 119/272 (43.75%), Query Frame = 0
Query: 154 LDVLRLAKVV--FDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRR 423
+DV R + V F +++G+RPD F++ + CA D ++ ++ FG ++ TS++ +AK ++E+ + + ++ + T++T+I + G + L F Q + + P+ ++ GVL++C R+ ++M+ + + ++++ + GS+ A ++ F + D V+ + + M+ A + L ME S I PN +T+ + T G ++ + + M R
Sbjct: 191 IDVGRYREAVNMFSKSLEMGLRPDSFSLVRVLAACAHSGDLNSGEWIDR-SITQFGLSRDVFVATSVVDMYAKCGNMEKARLAFDGMPEKDIV----TWSTMIQGYASNGLPKEALDLFFQ-MQKEKLAPDCYVMVGVLSACARLGALELGDWASKLMDRAEFLSNPVLGTALIDMFAKCGSI----------AQAFEIFKRMKEKDLVVWNAAISGLAMNGHVKAAFGLFSQMEKS-GILPNGNTFIGLLCCCTHVGLVDDGHRYFDSMSR 445 The following BLAST results are available for this feature:
BLAST of Ggra7471.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 7
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra7471.t2 ID=Ggra7471.t2|Name=Ggra7471.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=806bpback to top |