Ggra7471.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7471.t2
Unique NameGgra7471.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length806
Homology
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A2V3IGU4 (Pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGU4_9FLOR)

HSP 1 Score: 687 bits (1774), Expect = 2.660e-235
Identity = 381/786 (48.47%), Postives = 510/786 (64.89%), Query Frame = 0
Query:   28 CTRSPSLNQRSIQARQARP-RISPDIHRATTLRKAGELHKAYDVLNSALPHVRQHVAYNRELIRTTAALIAQSSS----------VESAEQLWFALERILRGDCS-RPDSFTFNSLLSALRVLDAERNLPQHAQQHEKLDVLRLAKVVFDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQIL-ERMRRRDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCGETEKVQSLFDEIENDEHLEIDAVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPLDSKAYGLLLSILFEFGEREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHENCVKLFNHMKEKRVLPDKITYTTMIRVFSRAGLLDRAFRLLGEMQDLGLAISDMYAWTSLMDGCRRCGQWQRAVELLAFMKKHSSEYEHSLVPSPSTACYNAALYAAGIGGEDWRTSVKIYESLLADQTQQPDYVTYSAMASIILRKRHRISEWHIVMQVSQALEDLLLEHSKPPDETRKRRDTIEGLDRGLNKTMRKKLLSKMSSLKELIE 800
            CTR    + +  +AR+  P R++  + RA  LRK G L  A DVL S     R+HV+Y  ELIR TAAL  Q             + +A+QLW  L ++L+ DC   PD+ TFN+L SAL V   +R +   A        L++AK+ F+ M +  V  D +TMSILF++C    D  YA LFE+QA+  +GF PN++SG ++L A+AK++S  +V+RV+++L+   VPFNER YT IISA LK G HAQVLH+F  AI S  V P+VFLFSG LTSCLRV D  NALR+ Q M  ++VHPT+PILN++ ELA+R+   R+G+ Y+ +WAP++   CD   YD++I+SWK+  T + +T  A+Y LL ++E++ ++ P  STYNAAI+TL +HG+ EQ +QI+ +R+  R +                                                 LS    + V+SL  E++ D  LE+D   RC QLKLYRI+++ ++AL+LH  TQ++GKPLDS AYGLLL+ILFE G RE+AISLFGWL+W       IYNVMI N+   ++  E CV+LFNHMK K +LP+ ITYT MIR +S+AGLLDRAFR+LGEMQD+GLA+SDMYAWT LMDGCRR GQWQRAVELL FM+  ++  E SLVP PSTACYNAALYAAGIGG DW+ +V I+ESL+ D+  +PD VT+SAMASIIL+ R  +SEWHIV +V  +LE+L    +       ++R  IEG +R L+   RKKLL+K+  LK LIE
Sbjct:   32 CTRVRCASDKG-RARRTPPFRVASQVRRAAALRKEGNLRDAKDVLGSVSNAQRRHVSYVNELIRVTAALELQQRQRRRRRDSNHLISNAKQLWHLLWQLLK-DCQVLPDTGTFNALFSALSVW--QRVVKDDA-------ALQVAKLGFELMNEFDVVADHYTMSILFSLCEKPEDVHYARLFERQAIARYGFVPNVISGCAMLNAYAKASSFSDVNRVISLLKAASVPFNERIYTVIISAFLKQGHHAQVLHHFALAIDSQHVKPSVFLFSGALTSCLRVRDSNNALRILQQMRQERVHPTQPILNLIFELAIRTADFRIGLGYLLEWAPQHGLVCDHRHYDRIISSWKRAQTRVDETVRAVYTLLDHVESASDVIPQTSTYNAAISTLISHGHFEQAQQIVFQRIPSRKLSPDGVTYNALIHCYGKAGKPGRAFQVIQTMKQNNIQPNQVTYNTIIEILLSFRMIDLVKSLLSEMKKDPRLEMDENVRCSQLKLYRIEKDVRSALRLHAFTQQIGKPLDSMAYGLLLTILFECGHREEAISLFGWLLWKTSTEARIYNVMIDNMALLDDNCETCVRLFNHMKWKGILPNTITYTIMIRTYSKAGLLDRAFRMLGEMQDVGLAMSDMYAWTVLMDGCRRFGQWQRAVELLRFMQTRNASGECSLVPRPSTACYNAALYAAGIGGRDWKQAVSIFESLVDDEVHRPDAVTFSAMASIILQNRRDVSEWHIVQRVYDSLEELATGDTARLGVVEQKR--IEGSNRKLDAPERKKLLAKLGRLKTLIE 804          
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A816QUF3 (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816QUF3_9BILA)

HSP 1 Score: 73.9 bits (180), Expect = 7.050e-10
Identity = 102/506 (20.16%), Postives = 206/506 (40.71%), Query Frame = 0
Query:  159 LAKVVFDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDF--GFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQA-ISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRP---ILNVMLELALRSGSVR--------LGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALY-----------------DLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRRRDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCGETEKVQSLFDEIENDEHLEIDAVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPL----------DSKAYGLLLSILFEFGEREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHE-NCVKLFNHMKEKRVLPDKITYTTMIRVFSRAGLL 622
            +A+ VFD + ++ ++PD FT++ILF  CA  A+ R A    ++ +D+    ++ N+V   S +    K   ++  +R+    +++ +     TY  II  ++      + L  F+Q  ++  SVT     ++ V  +C  ++++  A+++ + + +K     R    I    +++ ++ G V         +  K +  +      +    +++K +  +++   ++++  +A+                  +LL  M  +Y    NI+T N+AI  L   G++E  E+I   ++ +DI+                                                      EK   LF++I+    +E+  V        Y I  N  A L  ++   ++GK L          D+      + +L  FG+ E A  +F  +   +     IY  ++   G   NG    C K+F  MKEK V+PD+I +  +I   S++G+L
Sbjct:  145 MAEKVFDLLDEMDIKPDSFTLAILFKACAELANDR-AIKIGRKLLDEMPENYRNNVVVLNSAMHMLMKFGDIQSAERIFRSNKKKDII----TYNAIIKGYVGNEMFERALDLFEQIHLNFDSVT-----YTVVFNACAGLAND-RAMKIGKELLAKMPDNYRNDNIISTSAIDMLMKFGDVESAERIFRSIKTKNIITYGAMVKGYVGNEMFEKALDLFEQIHLSLTNVIYAIAFNCCAKLCNDRAMKIGKELLAKMPENYR-NDNITT-NSAIDMLMKFGDVESAERIFRSIKAKDIITYGAMVKGYVGNEMF---------------------------------------EKALDLFEQID----IELGDVT-------YSIAFNCCAKL-CNDRAMKIGKKLLAKMPENYRNDNITSTSAIDMLMRFGDVESAERMFRSI---KAKGTNIYGALMN--GYNLNGESWKCFKIFEEMKEKDVIPDEIAWNILIGACSKSGML 581          
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A6J1I8T1 (putative pentatricopeptide repeat-containing protein At3g08820 n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1I8T1_CUCMA)

HSP 1 Score: 69.3 bits (168), Expect = 2.070e-8
Identity = 51/260 (19.62%), Postives = 118/260 (45.38%), Query Frame = 0
Query:  164 FDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRR 423
            F  ++++G+RPD F++  + + CA   D       ++  + D G   N+   TSLL  + K  ++E  + + N + ++ +     +++T+I  +   G   Q L  F Q + S ++ P+ +   GVL++C R+      +    +M+  +      +   ++++  + GSV             ++ F  +   D+V+ +      +M+    A++ L   +E  + I+P+ +T+   +   T  G +++  +    M+R
Sbjct:  203 FKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY-ISDCGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIV----SWSTMIQGYAFNGLPKQALDLFFQ-MQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDQHEFLSNPVLGTALIDMYSKCGSVTRA----------WEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVE-KHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKR 445          
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A6P5Z3Q3 (putative pentatricopeptide repeat-containing protein At3g08820 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5Z3Q3_DURZI)

HSP 1 Score: 65.5 bits (158), Expect = 3.230e-7
Identity = 66/296 (22.30%), Postives = 128/296 (43.24%), Query Frame = 0
Query:  133 SALRVLD--AERN-LPQHAQQHEKLDVLRLAKVV--FDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRR 423
            +AL V D  +E+N +   A     +DV R  + V  F  +ID+G+RPD F++  + + CA   D       E+  +  FG   N+   TSL+  +AK  ++E+     + + ++ +     T++T++  +   G   + L  F Q +    + P+ +   GVL++C R+          ++M+  +      +   ++++  + GS+      V  W    + F  +   D V+ +   +   M+      + L   ME S  I PN +T+   +   T  G ++   Q    M R
Sbjct:  169 NALNVFDDISEKNVISWTAMISGYIDVGRYREAVDMFSKLIDMGLRPDSFSIVRVLSACAHLGDLNSGEWIER-CITQFGLSRNVFVATSLVDMYAKCGNMEKARCAFDGMPEKDIV----TWSTMVQGYASNGLPKEALDLFFQ-MQKEKLAPDCYSMVGVLSACARLGALELGDWASKLMDRDEFLSNPVLGTALIDMFAKCGSI------VQAW----EIFNSMKEKDLVVWNAAISGLAMNGHVKPAFGLFGQMEKS-GILPNENTFMGLLCGCTHVGLVDDGRQYFHGMNR 447          
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A2I0WHW3 (Pentatricopeptide repeat-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WHW3_9ASPA)

HSP 1 Score: 63.9 bits (154), Expect = 1.080e-6
Identity = 102/513 (19.88%), Postives = 203/513 (39.57%), Query Frame = 0
Query:  163 VFDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSC-----LRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRRRDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCGETEKVQSLFDEIENDEHLEIDAVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPLDSKAYGLLLSILFEFGEREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHENC-VKLFNHMKEKRVLPDKITYTTMIRVFSRAGLLDRAFRLLGEMQ-DLGLAISDMYAWTSLMDGCRRCGQWQRAVELLAFM 668
            +F  M+DLG+ P++FT+S + + C+     +   L    A+     K N     +L+  FAK   L    RV + L ++    N+  +T +I+ + + G     +  F + +    V P+ +  S V+++C     L +  + ++L + +I     V     ++N+  +     G   +  + V D  P+++    V  +  +I+ + +   N     HAL   L+ +E    IKPN  TY++ +       N E  +Q+   + +  +                                                 +    +E+   +F +IE+  +L  +A      L             +LH    ++G   D      L+S+    G  E A S+F  + +   ++   +  MI   G  ++G  +C ++LF+ M    + P+++TY  ++   S  GL+    ++   MQ D GL +  M  +  ++D   R G+ + A E +  M
Sbjct:  159 IFLEMLDLGLIPNEFTISSVLHACSNPDFSKIGILLLGSAIKTGFCKRNASVAGALIDMFAKIGDLASARRVFDELLEK----NKVVWTLMITRYAQHGLCLDAVKLFVEFVFDDFV-PDQYSLSSVISACSELESLLLGKQLHSLAI-RIGFVSDVCVGCSLINMYAKCV--EGGAMVDSRKVFDRMPQHN----VMSWTAIISGYVQGDRNDE---HALSLFLKMLEGK--IKPNHFTYSSILKACANLSNAELGKQVYAHVIKSGLAFVNFVGNSLVTMFANSGRMEDACKAFEVLYEKNLVSYNALVDGY----VKNSNSEEAFDIFQQIES-MNLGANAFTFASLLSSAASIGVMSKGQKLHGQLLKMGYESDICINNALISMYSRCGNTEDACSVFDEMRYRNVIS---WTSMI--TGFAKHGEAHCALQLFHEMLSTGLRPNEVTYVAVLSACSHVGLVREGLKIFHSMQRDHGL-VPRMEHYACMVDLLGRSGRVEEAFEFITSM 643          
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A200RDN1 (Pentatricopeptide repeat n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200RDN1_9MAGN)

HSP 1 Score: 63.5 bits (153), Expect = 1.290e-6
Identity = 99/536 (18.47%), Postives = 194/536 (36.19%), Query Frame = 0
Query:  144 LPQHAQQHEKLDVLRLAKVVFDAMIDLGVRPDQFTMSILFNMCA----FRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKK-----TSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRRRDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCGETEKVQSLF-DEIENDEHLEIDAVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPLDSKAY--GLLLSILFEFGEREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHENCVKLFNHMKEK-RVLPDKITYTTMIRVFSRAGLLDRAFRLLGEMQDLGLAISDMYAWTSLMDGCRRCGQWQRAVELLA 666
            L  H ++ +    L L   +      +  +PD FT+ I    CA     R  K    L +K          ++  G++L+  +AK   + +   V     +  V      +T++I+ + + G   + L +F + +    +TP+      V++SC ++ +      V              ++N  L L  ++GS+R                    +Y+K + SW             D   +L++  Q +E  Y+  PN  T  + +    A GN+++  +I E  +R+                                                   L+       +S+  D    D  + +  +  C +L +         AL LH     +    D K +    L+ +  + G  E +I +F  +    Q    +++ MI   G    G E  ++ FN M E  RV+P+ IT+ +++   S  GL++  F++  EM            ++ ++D   R G+  +A+E ++
Sbjct:   74 LRSHCREKQWEVTLHLFNNMLSTTSTMSDKPDNFTVPIAIKACAGLLALRTGKTIHGLVKKNDK----INSDMFVGSALVELYAKCGEMGDALGVFEEFPEPDVVL----WTSMITGYQQNGNAEKALSFFSRMVMDEGLTPDRVTLVSVVSSCAQLMNLGAGKCVHGFTIKMGFDTDLSLVNSFLNLYAKTGSIRNARNLFEK------------MYEKDVISWSSMISCYAQNQKPDEALSLFN--QMVEKRYD--PNSVTLVSVLQACAAAGNVDEGRRIHELAKRKGCELDVSVSTALVDMYMKCSCIEKAVDLFKRMPQKDVVCWGAFISGYAQNGLANESLGIFRSMLSDGTRPDAVIMVKVLKACAELGIL------HQALCLH--CYLVSSGFDDKVFVGAALIDLYSKCGNLENSIRVFEGM---NQRDVVVWSSMIAGYGIHGFGSE-AIRTFNRMIESSRVIPNDITFLSILSACSHTGLVEEGFKIFDEMVHKYQIEPTSEHYSVMVDLLGRTGKLDKAMEFIS 573          
BLAST of Ggra7471.t2 vs. uniprot
Match: A0A6J1BK76 (putative pentatricopeptide repeat-containing protein At3g08820 n=4 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J1BK76_9ROSI)

HSP 1 Score: 62.0 bits (149), Expect = 3.820e-6
Identity = 54/272 (19.85%), Postives = 119/272 (43.75%), Query Frame = 0
Query:  154 LDVLRLAKVV--FDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEKQAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTYTTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEANALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDAFCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNAAIATLTAHGNIEQTEQILERMRR 423
            +DV R  + V  F   +++G+RPD F++  +   CA   D       ++ ++  FG   ++   TS++  +AK  ++E+     + + ++ +     T++T+I  +   G   + L  F Q +    + P+ ++  GVL++C R+          ++M+  +      +   ++++  + GS+          A  ++ F  +   D V+ +   +   M+    A + L   ME S  I PN +T+   +   T  G ++   +  + M R
Sbjct:  191 IDVGRYREAVNMFSKSLEMGLRPDSFSLVRVLAACAHSGDLNSGEWIDR-SITQFGLSRDVFVATSVVDMYAKCGNMEKARLAFDGMPEKDIV----TWSTMIQGYASNGLPKEALDLFFQ-MQKEKLAPDCYVMVGVLSACARLGALELGDWASKLMDRAEFLSNPVLGTALIDMFAKCGSI----------AQAFEIFKRMKEKDLVVWNAAISGLAMNGHVKAAFGLFSQMEKS-GILPNGNTFIGLLCCCTHVGLVDDGHRYFDSMSR 445          
The following BLAST results are available for this feature:
BLAST of Ggra7471.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IGU42.660e-23548.47Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A816QUF37.050e-1020.16Hypothetical protein n=2 Tax=Rotaria magnacalcarat... [more]
A0A6J1I8T12.070e-819.62putative pentatricopeptide repeat-containing prote... [more]
A0A6P5Z3Q33.230e-722.30putative pentatricopeptide repeat-containing prote... [more]
A0A2I0WHW31.080e-619.88Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A200RDN11.290e-618.47Pentatricopeptide repeat n=1 Tax=Macleaya cordata ... [more]
A0A6J1BK763.820e-619.85putative pentatricopeptide repeat-containing prote... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 290..492
e-value: 3.6E-12
score: 46.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 572..616
e-value: 1.6E-9
score: 37.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 431..464
e-value: 6.0E-5
score: 21.0
coord: 397..430
e-value: 1.0E-5
score: 23.4
coord: 643..671
e-value: 0.0023
score: 16.0
coord: 607..638
e-value: 6.8E-7
score: 27.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 249..272
e-value: 0.95
score: 9.9
coord: 644..671
e-value: 2.7E-4
score: 21.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 394..428
score: 10.884628
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 641..675
score: 9.788499
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 464..498
score: 8.933517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 605..639
score: 11.520384
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 429..463
score: 11.158661
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 641..750
e-value: 2.8E-9
score: 38.6
coord: 34..198
e-value: 9.7E-10
score: 40.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 508..640
e-value: 4.5E-17
score: 64.5
coord: 350..507
e-value: 8.6E-30
score: 106.2
coord: 199..349
e-value: 2.4E-18
score: 68.7
NoneNo IPR availablePANTHERPTHR47934PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIALcoord: 332..730
coord: 100..494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:132594..135011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7471.t2Ggra7471.t2Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 132594..135011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7471.t2 ID=Ggra7471.t2|Name=Ggra7471.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=806bp
MAPPCHCERAVPLTFLSPCVLPRLQEYCTRSPSLNQRSIQARQARPRISP
DIHRATTLRKAGELHKAYDVLNSALPHVRQHVAYNRELIRTTAALIAQSS
SVESAEQLWFALERILRGDCSRPDSFTFNSLLSALRVLDAERNLPQHAQQ
HEKLDVLRLAKVVFDAMIDLGVRPDQFTMSILFNMCAFRADKRYAALFEK
QAVDDFGFKPNIVSGTSLLAAFAKSASLEEVDRVVNILQQQQVPFNERTY
TTIISAHLKFGKHAQVLHYFDQAISSPSVTPNVFLFSGVLTSCLRVSDEA
NALRVFQIMESKKVHPTRPILNVMLELALRSGSVRLGMKYVTDWAPRYDA
FCDVALYDKVIASWKKTSTNMSDTFHALYDLLQYMEASYNIKPNISTYNA
AIATLTAHGNIEQTEQILERMRRRDIVPDVCTYNILLHSHGKFGNIDKAL
ESIRTMKQNHVRPDQITYNILLQSFLSCGETEKVQSLFDEIENDEHLEID
AVGRCMQLKLYRIQRNTQAALQLHNATQRLGKPLDSKAYGLLLSILFEFG
EREKAISLFGWLVWTRQVACPIYNVMIGNVGKEENGHENCVKLFNHMKEK
RVLPDKITYTTMIRVFSRAGLLDRAFRLLGEMQDLGLAISDMYAWTSLMD
GCRRCGQWQRAVELLAFMKKHSSEYEHSLVPSPSTACYNAALYAAGIGGE
DWRTSVKIYESLLADQTQQPDYVTYSAMASIILRKRHRISEWHIVMQVSQ
ALEDLLLEHSKPPDETRKRRDTIEGLDRGLNKTMRKKLLSKMSSLKELIE
SVNNP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf