Ggra7468.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7468.t1
Unique NameGgra7468.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1477
Homology
BLAST of Ggra7468.t1 vs. uniprot
Match: A0A2V3IGS1 (DNA-directed RNA polymerase subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGS1_9FLOR)

HSP 1 Score: 2459 bits (6372), Expect = 0.000e+0
Identity = 1269/1476 (85.98%), Postives = 1354/1476 (91.73%), Query Frame = 0
Query:    1 MCMETSVHEEGNSSTAPFSTASFNVRPPRITKKKDTVEQSAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRLARSKVKTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCALKDEEDPVLSPFELGFQGEELVNDLREDLLDAKLVPDGDQEENKGGLDHCLTEVGEYLKKVSDVGKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEKNTSAVFQRRDILLDSYPSFGV 1476
            MC+ET  H E   ST      SF  RPPR+TKKKDTVEQSAAPNRIKAIKFG+ASA+EIA+NAH+VVNNR+IY+QRDRSQ+RGGALDPRLGAIDK A CETCNQKQE CIGHFGY+RLVLPVFH GYFKATLKILQMICKFCSRVM+ E+ R RYLQRLA+SKVKTSLHH+IWEKAKRVK+C +C RRNGVVKKTSVL+IMHYPLDNKPPSKK    XXXXX    EN+PV+DPVFEMAAS NPDL+KHLPK AD+LNPMRVL+LF  ITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDP+AGS EDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWD+LQYEVARYINS+QPGLP QQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNL +DQVGVP+HVAKILTFPER T FNMEMLR LIRNG+Q+YPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHL++GDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVV+N+CTPKSGEPLVAATQDFITASYL+TSKN FMDRSE SRV AM+SNAEF++ LPPPAI+KPVEMWTGKQ YSALIQSAARSAGAR H VYNP ERFRDTGVL+PSMAYVTTEVAEKGHKKDLIPPGEFPGMCP+DTYVYFRGGELMCGQ+GKK+LGDGSKKSVLY+LARECGNE+AAYAMNRIARFGARWLADGAFSIGVDDVMPS  L  AKA+YI ES+ RCKEIML YDHG LELQPGCTARETLEA+LMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQM YGDDGLDPLQMETD G PV FDR+LDAVTCALKDE+DPVLSPFEL    EEL+NDLREDLLDAKL+ DGD+EENKGGLD+CL +V E+L+K S+     LRRSQ+KEFLR VQAK RRAAIEPGTAVGAI AQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASK+ISTPVT+APLVW++DVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYI++QLDMKTIH LQLDI++ESVAE I+RHSFS VRVT +DV+I+RPDKLR+NP+VKE+ FG             K+ +                  VCGISSVSRAVISDCSTGG+PEYQLEIPS+NIA+IMV PGVDGTKVSCNHIMAMEKTLGIEGARHSILHEM+TTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKED+ISGVSERIIMGVPIPLGTGLFQL R++ E+N S+  QRR ILLDS+PSF V
Sbjct:    1 MCVETPTHHEHQKSTEGQKPKSFIARPPRVTKKKDTVEQSAAPNRIKAIKFGVASAQEIAANAHIVVNNRDIYDQRDRSQVRGGALDPRLGAIDKAATCETCNQKQELCIGHFGYIRLVLPVFHGGYFKATLKILQMICKFCSRVMMEEEDRYRYLQRLAKSKVKTSLHHQIWEKAKRVKNCPHCSRRNGVVKKTSVLKIMHYPLDNKPPSKKKDEDXXXXXXXXXENAPVYDPVFEMAASHNPDLRKHLPKGADNLNPMRVLSLFNKITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPSAGSTEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDYLQYEVARYINSDQPGLPTQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLRVDQVGVPVHVAKILTFPERVTAFNMEMLRKLIRNGLQKYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLMEGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVQNLCTPKSGEPLVAATQDFITASYLMTSKNTFMDRSEMSRVVAMISNAEFSVELPPPAIVKPVEMWTGKQFYSALIQSAARSAGARLHAVYNPEERFRDTGVLRPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPKDTYVYFRGGELMCGQVGKKTLGDGSKKSVLYVLARECGNEAAAYAMNRIARFGARWLADGAFSIGVDDVMPSAQLSAAKANYIAESNVRCKEIMLDYDHGTLELQPGCTARETLEAVLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMCYGDDGLDPLQMETDDGTPVKFDRSLDAVTCALKDEDDPVLSPFELDIHSEELLNDLREDLLDAKLLTDGDEEENKGGLDYCLAKVEEFLRKKSNDEASYLRRSQIKEFLRLVQAKVRRAAIEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKSISTPVTIAPLVWNSDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYIAVQLDMKTIHNLQLDITVESVAESIVRHSFSNVRVTLDDVLIMRPDKLRVNPYVKESIFG-------------KNWDI-----------------VCGISSVSRAVISDCSTGGAPEYQLEIPSDNIAEIMVAPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMKTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDEISGVSERIIMGVPIPLGTGLFQLLRKTKERNVSSELQRRRILLDSFPSFKV 1446          
BLAST of Ggra7468.t1 vs. uniprot
Match: R7QR74 (DNA-directed RNA polymerase subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR74_CHOCR)

HSP 1 Score: 1649 bits (4271), Expect = 0.000e+0
Identity = 876/1433 (61.13%), Postives = 1057/1433 (73.76%), Query Frame = 0
Query:   55 SAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRL------ARSKVKTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMET-DIGKPVNFDRTLDAVTCALKDEEDPVLSPFELGFQGEELVNDLREDLLDAKLVPDGDQEENKGGLDHCLTEVGEYLKKVSDV-----GKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDC-STGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEKNTSAVFQRRDILL-DSYPS 1473
            S++EIAS AH+ VNNR+ Y+ +DRSQ RGG LDPRLGAI+K AVCETC +  + CIGHFGY+RL LPVFH GYFKA L  LQMICK CS VM+   +R +Y+ +L      ++S ++ S+  E+W ++K+V  C YC R NG VKKT+VL+I+HYP DNKP    XXXXXXXXX                           L  +AD LNP++VL LF+ I AEDV+LLDM+PE GRPER+LVQYLPVPPLCIRP+VC+DP+AGS EDDLT+KAAEIV +N+ I QL+EKGGT + ++++WD +QYEVARYINS+QPGLPL QG  K LR                          RTVISPDPNL IDQVGVP  VAK+LT+PER T FN+++LR ++RNG ++YPGANH+E+ DG++KFLKYG+R+K+A+EL  GTIVERHL+DGDIVLFNRQPSLHRISIMAH+VKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVV NI TPK+GEPLVAATQDFIT+SYL T K++FMDR+EF+RV A +S+AEF++PLP PAI KP+E+WTGKQL++ LIQSAA SAGA    V   ++ F ++                                   D YV FRGGELMCGQ+GKKSLGDGSKKSVLYILARECGNE+AAYAMNR+ARF ARWL DG FSIGVDDV PS +L+  KA  + +  ++C+E +     G+L  +PGC+  ETLEA+L KEL  +R     AC   +DV TNA LTMALAGSKGS +NI+QMI+CVGQQ +GG RAPDGFFGR LPHFELGL A +P+AKGFV+NSFFSG+  TEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSS GSV+Q+ YGDD LDP++ME  + GKPVNF R LDA                        +V +L +DLL +KL+P  D EEN+GGL HC+ +V ++L K +D        F LRRSQVKEFLR VQAK R+A +EPGTAVGAIGAQSIGEPGTQMTLKTFHFAG  +M+IT GVPRLKEIINAS  ISTP+T APLV+  ++ +ARIVKGRV+ T LG +  +IKEVYR   +Y++++LD   I   QLD+ I  VA RI+ HSFSK+R ++  +                    E  ++ + KE R+K ME+ PY L+Q+LK QLP+V VCGI +VSRAVIS+  S  GS  Y L I S++I  +M  PGVDG  V+CNHIMA+EKTLGIE AR SIL ++  T+ +HGL+V  HHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMT++HLF AAIHS++D+ISGVSERIIMGVPIPLGTGLF+L R+S   + S   Q+R+ILL +S P+
Sbjct:    2 SSKEIASAAHIEVNNRDFYDAQDRSQTRGGTLDPRLGAINKRAVCETCQESLQECIGHFGYIRLCLPVFHPGYFKAALNTLQMICKHCSHVMIKPSLRLKYVTKLRNPTLSSKSHIRGSILREVWTQSKKVSLCPYCDRANGTVKKTAVLKIVHYPADNKPXXXXXXXXXXXXXXXX--------------------XXXDLFLAADDLNPLKVLQLFEKIPAEDVQLLDMDPEIGRPERMLVQYLPVPPLCIRPTVCADPSAGSTEDDLTVKAAEIVQVNSAIAQLMEKGGTTATVFDAWDQMQYEVARYINSDQPGLPLVQGAAKPLRGICQRLKGKTGRFRGNLSGKRVDFSGRTVISPDPNLRIDQVGVPQRVAKVLTYPERVTKFNIDLLRKMVRNGTEKYPGANHIEYQDGSKKFLKYGDRKKIAKELSFGTIVERHLIDGDIVLFNRQPSLHRISIMAHRVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVNNIMTPKNGEPLVAATQDFITSSYLSTRKDVFMDRAEFTRVLATMSSAEFSLPLPQPAIQKPMELWTGKQLFTVLIQSAALSAGATKERVSMADKSFTESA----------------------------------DAYVCFRGGELMCGQVGKKSLGDGSKKSVLYILARECGNEAAAYAMNRLARFSARWLTDGGFSIGVDDVSPSLALQRIKARLVNDGYEKCQEFIEQLRVGKLAPRPGCSPEETLEAVLNKELSNIRDVAGKACLNEIDVRTNAALTMALAGSKGSTINISQMISCVGQQTVGGGRAPDGFFGRALPHFELGLKARSPVAKGFVSNSFFSGMKATEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSSGSVIQIRYGDDDLDPIEMEDPNDGKPVNFSRLLDA------------------------MVKELSDDLLASKLLPSED-EENRGGLAHCIKDVQKFLIKFADKQDELESSFGLRRSQVKEFLRHVQAKVRKATVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRLKEIINASTRISTPITTAPLVFDREMTAARIVKGRVQRTLLGEIALYIKEVYRSDDSYLAVRLDKSVIDAFQLDVDIVEVAMRIVSHSFSKIRTSKRGL--------------------ENMLRLKNKEARKKDMESRPYFLMQALKHQLPNVPVCGIGAVSRAVISESDSVRGS--YHLAIESDDIGSVMTVPGVDGVNVTCNHIMAVEKTLGIESARQSILSQIAFTMSSHGLSVADHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTLDHLFDAAIHSRKDEISGVSERIIMGVPIPLGTGLFRLLRKSTPDDESVAAQKRNILLKESMPT 1333          
BLAST of Ggra7468.t1 vs. uniprot
Match: A0A7S3E8Q3 (DNA-directed RNA polymerase subunit n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E8Q3_9RHOD)

HSP 1 Score: 1288 bits (3333), Expect = 0.000e+0
Identity = 708/1461 (48.46%), Postives = 934/1461 (63.93%), Query Frame = 0
Query:   34 KDTVEQSAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRLARSKVKTSLH------HEIWEKAKRVKDCLYCGRRNGVVKKTSVLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEF-PGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDI-GKPVNFDRTLDAVTCALKDEEDPVLSPFELGFQGEELVNDLREDLLDAKL---VPDGDQEENKGGLDH-CLTEVGEYLKKVSDVGK----------FKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTG-GSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEKNTSAVFQRRDILLDSY 1471
            K+ V    +  +I +++FG     E +  + + + N E+Y  R R   R G LDPRLG IDK AVC+TC     +C GH+G +RL LPVFH G+FK T++ILQMICK CSR+++ E  R + LQR+ R K+ +  H        IW KAK+   C +CG   G VK+  VL+I+HYP  N   S+          D            F    S+NP++++HL K+AD L P+RVL LF+ +  +DV+LL MNP+ GRPE+LL+  L VPP+CIRPSVC+DP  GS EDDLT+  ++I + N  I + L +G     I+E W+ +Q   AR+INS+ PG+P      K +R                          RTVISPDPNL ID+VGVPI VA+ LT+PER T  N+E LR +I  G   YPGAN +EFPD ++++LKYG+R K A+E+  G IVERHL+DGDIVLFNRQPSLH+ SIM+H VK+ P RTFRFNECVCAPYNADFDGDEMNLHVPQT+EAR EA EL+  +RNI T ++GEPL+AATQDF+TASYLIT K+ F DR+E  R+ + + +AE  + LP PAI+KP+E+WTGKQ+YS L+ SA          V    ER R            T E AEK      I    + P +CP D +V    G+++ GQLGK SLG GSKKS+LY L RECGNE AA AMNRIA+F ARW +D  FSIG+DDV PS  L   K   ++   ++C+EI+   + G+L+ +PGC   +T+EA++  EL G+R K   AC   +D   NA L MAL GSKGS++NI+QM+ACVGQQ +GGKR P+GFFGR LPHFE GL A  P AKGFV NSFFSGLT TEFF H   GREGL DTAVKTA+TGYMQRRL+KALEDL V YDSTVR+SDGSVVQ +YGDDGLDP +ME++  G+P+NFDR+        +   + +L+P +L    + +    R D+L   L   V D      K    H    E  + +   +D  +          + +RR+QV+  +  ++ K  +++IEPGT VGAIGA SIGEP TQMTLKTFHFAG  +M+IT GVPR+ EIINASK+ISTP+  APLV   DV +ARIVKGR+E TTLG V K+++ VYRG   YISI+L+ + I  L L++ I  V   IIR     ++    DV ++  DK+ + P                       M+   ++ + +L  +LP+V V G+    RAVI+D + G G+P+Y L +  + +  +M  PGV G + +CNH+ A+EKTLGIE AR +I++E+  T+ +HG+++D  H+ LLAD M+  G VLGI RFGI KM+TSTLMLASFE  V+HLF AA+HS++D +  VSE II+GVPIPLGTGLF+L R ++     A  QR+ +L D++
Sbjct:   21 KELVLTGLSEKKIASLEFGTLDPGECSKLSTIEIENGEMYTSR-RDPARNGPLDPRLGPIDKRAVCDTCGSDLANCAGHWGCIRLALPVFHIGFFKTTVQILQMICKTCSRILILEPERSQLLQRVRRPKITSESHVRNAMLKRIWTKAKKNSICPWCGAVQGPVKRVGVLKIVHYP-HNVKLSRIHQHRKLELQD------------FSAVISKNPEIERHLGKAADDLTPIRVLRLFQQVPDDDVELLLMNPKVGRPEKLLMTILAVPPVCIRPSVCADPTVGSTEDDLTILFSQIANTNNGIKEALSRGNPVEQIFELWEFIQVLCARFINSDLPGVPPSVTGTKPVRGLSQRLKGKTGRFRGNLSGKRVDFTSRTVISPDPNLRIDEVGVPIRVARTLTYPERVTSHNIERLRKMILKGPDDYPGANFIEFPDKSKRYLKYGDRHKYAQEIGAGCIVERHLVDGDIVLFNRQPSLHKNSIMSHSVKVVPWRTFRFNECVCAPYNADFDGDEMNLHVPQTEEARAEASELLCTLRNIVTARNGEPLIAATQDFLTASYLITRKDRFFDRAEACRILSFLMDAEEYVVLPEPAIIKPIELWTGKQIYSCLLLSA----------VGFDRERLRG----------FTLECAEKSFSLQSIKSDSYAPHLCPDDGWVAIDNGDIISGQLGKSSLGSGSKKSILYCLMRECGNEVAASAMNRIAKFSARWHSDAGFSIGLDDVTPSDQLTRRKMEIVQAGYEKCEEIIGLLEKGKLQPRPGCNQEQTMEALVNHELSGIREKGGKACINEIDPKANAALAMALCGSKGSNINISQMVACVGQQTVGGKRPPNGFFGRALPHFEGGLKAQTPAAKGFVQNSFFSGLTSTEFFFHTMGGREGLVDTAVKTAQTGYMQRRLMKALEDLGVMYDSTVRASDGSVVQFTYGDDGLDPAEMESEFDGRPLNFDRSFSDGKAFNRGSTERILTPEQLVDLADNIPE--RPDILKMNLPLVVRDLVSTIKKSAQKHKAAREKRDLMSFKTDEDRVAWLETVDEAYGIRRNQVERLVASMKNKVLKSSIEPGTTVGAIGATSIGEPATQMTLKTFHFAGVASMNITLGVPRITEIINASKSISTPIITAPLVNDKDVLTARIVKGRIERTTLGQVAKYVRVVYRGGDVYISIKLNTEVISKLHLEVIIGKVRTSIIR----TLKAKEADVTVMSKDKIHVRP--------------------SPHMKGSLFYQIINLLSRLPNVDVEGLPGARRAVINDVNEGAGTPKYNLLVEGDCMLRVMTIPGVRGEETTCNHVAAVEKTLGIEAARKTIMNEIVYTMESHGMSIDVRHVTLLADVMSFRGEVLGIQRFGIIKMKTSTLMLASFETAVDHLFDAAVHSRKDDVVSVSECIILGVPIPLGTGLFKLMRSASRTPVPA--QRQFLLRDTF 1419          
BLAST of Ggra7468.t1 vs. uniprot
Match: A0A1X6P7A6 (DNA-directed RNA polymerase subunit n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7A6_PORUM)

HSP 1 Score: 1253 bits (3241), Expect = 0.000e+0
Identity = 761/1586 (47.98%), Postives = 959/1586 (60.47%), Query Frame = 0
Query:   34 KDTVEQSAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRL------ARSKVKTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRIMHYPLDNKPPSKKXXXXXXXXXD-------------------ETEENSPVFDPV----------------------------------------------------------------------------FEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNA-------------------EFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEK-----GHKKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGK-PVNFDRTL-DAVTCAL----KDEEDPVLSPFEL--------------GFQGEELVNDLREDLLDA--------KLVPDGDQEENKGG-LDHCLTEVGEYLKKVSDVGKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEKNTSAVFQRRD 1465
            K+ V +S+AP +I  + FG+ SA+EIA  +HL V NRE+Y    R      ALD RLGAI+K+A C TC   Q  CIGH+GYVRL LPVFH GYFK+TL+ILQMICK CSRV+L +  R   L RL      A S ++ SL   +W++ K+   C  CG  NGVVK+   L+IMHYP   K  + +        X                    E    S V  PV                                                                            +  A   N DL++HL +  D LNP+R L LF+ ++AEDV L+DM    GRPERL+++YLPVPPLCIRP+VCSDP+AGS EDDLTMK  EIVHMN +++  ++KG   + + ESW+ LQ E AR+INSE   LP      K   XXXXXXXXXXXXXXXXXXXXXXXXX RTVISPDPNL +DQVG+P+ VA+ LT+PER T  N + L   +  G + YPGAN VE  DG ++FL+YGNR+++A+EL  G +VERHL+DGD+VLFNRQPSLHRISIMAH  K+ PHRTFRFNECVCAPYNADFDGDEMNLHVPQT+EAR EA  LM V  N+ TP++GEPL+AATQDF+TA++L+T K+M  D  EFSR+ A + +A                   E+T  LPPP+I KPV +WTGKQ++S L  S+  +       VY   +   D GV +  +  +T EV+EK     G   + +       MC +D +V  RGG+L+ GQ+GKKSLG G K+ +LY+L R  G+ +A  AMNR+A+  ARW +DG FSIGV DV PS +LR+ KA  +     +C + +     G+L  +PGC+  ETLEA+L  EL  +R     AC + LD + NA L M L GSKGS +NI+QM++CVGQQ +GG RAPDGFFGR LPHF  GL A  P AKGFV NSFFSG+T TEFF H   GREGL DTAVKTAETGYMQRRL+KALEDL+V YD TVR+SDG+VVQ+ YGDDGLDP +ME   G  PVNF R+L DA          D++   L P EL              G   E++   LR  + D         ++   GD     G  L   L  +              +R      F R V  K  RA  EPGTAVGA+GAQSIGEPGTQMTLKTFHFAG  +M+ITQGVPR+KEIINASK ISTP+  A LV S D+ +ARIVK R+E T LG V ++IKEVY    AYI+I+LD +T+  +QLD+    VA R+++    K++    +V      + R+                      +  ++   +  +Q L+  LP V V GI SV RAVI++ S G    Y L +  E+I  +M   GVDG KV CNHIMA E+ LGIE ARH+I HE+Q T+ +HG+++D+ H+ LLAD MT  G VLGITRFGI K +TSTLMLASFEMTV+HLF AA+HS+ D I+GVSE IIMG  +PLGTGLF+L R  + +    V +RRD
Sbjct:    5 KEMVLESSAPKQIAGLHFGVLSADEIARLSHLEVTNRELYTMPSREAGHNSALDGRLGAINKHATCATCGASQAECIGHWGYVRLELPVFHIGYFKSTLQILQMICKRCSRVLLPDAARNALLTRLRSPALSATSHIRGSLLKSLWDRCKKTTVCPGCGAANGVVKRIGSLKIMHYPYGVKTAAGQNSASARARXXXXXXXXALDAVTDAARAATENHLRSTVKTPVRGAGGGRGDGPDGPETITHAYTGEDDGVDEDGELVAEEAATAAGARAGRGRSINLYRKPTKTELREKAKAAAVEGAYREAKRNNTDLERHLSRVGDDLNPLRTLALFEAMSAEDVALIDMRAVGGRPERLILRYLPVPPLCIRPTVCSDPSAGSTEDDLTMKLTEIVHMNNLMSHSIDKGIASAALMESWEWLQVEAARFINSESTNLPPLASTAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRQRLAAAVLRGPETYPGANFVETDDGNKRFLRYGNRKRVAKELPLGAVVERHLVDGDVVLFNRQPSLHRISIMAHSAKVVPHRTFRFNECVCAPYNADFDGDEMNLHVPQTEEARAEAQALMAVHANLVTPRNGEPLIAATQDFLTAAFLLTRKDMLFDAMEFSRICAFMDDAGGMADFDHHGASFGKRKTGEWT--LPPPSIFKPVLLWTGKQVFSYLFASSIAA-------VYIGKDG--DAGV-RSILRGLTCEVSEKPFTLNGKTSNAVAAE----MCVKDGWVTVRGGDLLSGQVGKKSLGAGCKQGILYLLGRAAGSAAAGAAMNRLAKLAARWHSDGGFSIGVGDVTPSAALRDHKARLMDAGYTKCDDTIEQLRVGKLVPRPGCSLEETLEALLNSELSKIREDAGQACISDLDPNVNAPLIMTLCGSKGSTINISQMVSCVGQQTVGGSRAPDGFFGRSLPHFPSGLAARTPAAKGFVENSFFSGMTSTEFFFHTMGGREGLVDTAVKTAETGYMQRRLMKALEDLAVHYDGTVRASDGAVVQVVYGDDGLDPSEMEAVDGDLPVNFGRSLADAAAAGAGGVDADDDLRCLPPEELMAAAEAAVATGTRGGRYSEQMAKLLRAFVADVAHAHGDARRVAEAGDGGXXXGADLPALLASID---------AAHGVRAGTASRFFRTVALKVARATAEPGTAVGALGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASKAISTPIITAELVSSRDLVAARIVKARIERTLLGEVAEYIKEVYEKDVAYIAIRLDEETLRKVQLDVDAPKVARRLLQTPKLKLKAHHIEVT----GRYRLXXXXXXXXXXXXXXXXXXXXXXQ--VDADAFGHMQVLRSLLPKVIVEGIGSVHRAVINEKSDGS---YNLLVEGEDITSVMAVSGVDGEKVKCNHIMATEQGLGIEAARHAITHEIQFTMSSHGMSIDARHVALLADVMTFRGEVLGITRFGIAKFKTSTLMLASFEMTVDHLFDAAVHSRADAIAGVSECIIMGRQVPLGTGLFKLLRDGSAQG---VPRRRD 1553          
BLAST of Ggra7468.t1 vs. uniprot
Match: M2X7C8 (DNA-directed RNA polymerase subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X7C8_GALSU)

HSP 1 Score: 1231 bits (3186), Expect = 0.000e+0
Identity = 677/1475 (45.90%), Postives = 903/1475 (61.22%), Query Frame = 0
Query:   33 KKDTVEQSAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRL------ARSKVKTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDG-----TRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAM--VSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEK------GHKKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGK--PVNFDRTLDAVTC--ALKDEEDPVLSPFELGFQGEELV----------NDLREDLLDAKLVPDGDQEENKGGLDHCLTEV--GEYLKKVSDVGKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEK------NTSAVFQRRDI 1466
            K + V++   P +I  I+F +  AE++A  +   + +R++Y Q  R    GG LD  LG  DK   C+TC +    C+GHFG + L  PVFH GYFKAT  ILQ +CK CSRV+L +++   +L +L      A    + ++   I +  K  K C +CG  NG VKK  V++++H P  +                +TEE    F   F   A    D+  H+ K+ D LNP+RVL +   I  EDV LL M+P + RPE LL+   PVPP C+RPSVCSDP  GSNEDDLTMK +EIVH+N ++ Q +E GG  S + + W+ LQ E ARYIN++ PGLP     GK++R                          RTVISPDPNL I+QVGVP++VAK LTFPER T +N++ L   + NG   +PGAN VE  DG     T++FL+YG+R+K+A+EL  G +VERHL D DIVLFNRQPSLHR+SIM H+VK+ P RTFR NECVC PYNADFDGDEMN+HVPQT+EAR EA  LM V  N+ TP++GEPL+AATQDF++A Y  T K++++DR+EF+R+  +  + +  + + LP PAI+KP EMWTGKQ  S +++                         L P    +T  V EK      G++ + + P     +C  D YVY R GEL+CGQLGK SLG GSK+S+ Y+L+RE GN +AA AM+ I++F +RW +D  FS+G+DDV PS  L+  K   +R   + C +++ A+    LE +PGCT  +TLE  +   L  +R      C A +D   N+ + MAL GSKGS++NI+QMI+CVGQQ + G R PDGF GR LPHF  G+ A  P AKGFV NSFFSG+T TEFF H  +GREGL DTAVKTAETGYMQRRL+KALEDLSV YD+TVR SDG+VVQ  YGDDG+DP  +E   G   P+N ++ L+       +K + +P L+P E+    + L               + L D K        +++  L+   +    G  L+   D   F LR+SQ+   +R++  K +R  IEPGTAVGAIGAQSIGEPGTQMTLKTFHFAG  +M+IT GVPR+KEIINAS  I+TPV  A LV   D+  ARIVKGR+E TTLG +   IKEVYR    YIS+QLD + I  LQLD+ +  V   I+ +S  K+R+   D+ ++  D+L I  FV   + G++                  Y  + SLK QLPHV V GISS+ RAVI          YQL +   ++  +M T GV+GT  + NH++ +EK LGIE AR ++  E+Q T+ +HG+++D+ H+ LLAD M+  G +LGITRFGI KM+TS +MLASFE TV+HLF AA++  +D + GVSE +IMG+P+PLGTGLF L R               + Q+R+I
Sbjct:   12 KLEVVKEQDTPVKISCIQFCVPRAEDVARTSVTRITSRDLYTQPLRKPAAGGVLDLHLGPSDKTGQCQTCGESLATCVGHFGDISLAFPVFHMGYFKATYFILQCVCKACSRVLLPKELVSEFLHKLRSPITRANPSKRKAVLKNILKLCKSRKHCPFCGSPNGAVKKVGVMKLIHDPFSSAK--------------DTEEEKENFLRKFHFVADNLSDVSPHIQKAVDDLNPLRVLEILSRIPPEDVILLGMDPTYNRPENLLLTNFPVPPACLRPSVCSDPTIGSNEDDLTMKLSEIVHINCILQQAMENGGNASLVMDDWELLQLECARYINADLPGLPPSATSGKTIRGLCQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLSIEQVGVPVYVAKQLTFPERVTKYNIKQLSKAVLNGPDIHPGANFVELKDGKFGSWTKRFLRYGDRKKIAQELSLGLVVERHLRDNDIVLFNRQPSLHRVSIMCHRVKVFPCRTFRLNECVCTPYNADFDGDEMNMHVPQTEEARAEAATLMCVQENLVTPRNGEPLIAATQDFLSACYKFTCKDVYLDRAEFTRIIFLSGLQSVAYDLKLPNPAIIKPFEMWTGKQAISFILR-------------------------LCPGFQTMTAYVYEKQWSHPSGYESNFLAPH----LCKNDGYVYIRNGELLCGQLGKASLGSGSKRSLFYLLSREGGNSAAASAMSMISKFASRWFSDFGFSLGIDDVTPSVILQARKDELLRAGYKDCDDLIEAFQSRTLEARPGCTVEQTLEVSINAVLSKIREDAGKVCIAAIDPKVNSAMAMALCGSKGSNINISQMISCVGQQTVNGCRVPDGFLGRALPHFASGMSARTPWAKGFVKNSFFSGMTATEFFFHTMAGREGLVDTAVKTAETGYMQRRLMKALEDLSVNYDNTVRYSDGTVVQFLYGDDGMDPTVVEGASGANCPLNLEQLLEDSKAEGTIKSKGEPRLNPDEVIHYADSLTFHSFGAFEDSESHLKILRDVKNFLSSIARKHEMELERISSSCSNGSMLRDTIDAA-FGLRKSQLDALVRRIVHKLQRFKIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASPIINTPVITAELVSPNDITIARIVKGRIERTTLGEICNFIKEVYRRNQVYISLQLDKELISRLQLDVDVNVVRNAIVNNS--KLRLKENDIAVVSDDRLHI--FVPSKASGDL------------------YFQMNSLKRQLPHVVVQGISSIKRAVIHQKD---DKSYQLLVEGSDLLSVMTTAGVEGTCTTSNHVIIVEKVLGIEAARKTVASEIQYTMASHGMSIDTRHVALLADVMSFRGEILGITRFGIGKMKTSAIMLASFEKTVDHLFDAALYKTQDDVVGVSECVIMGMPVPLGTGLFGLLRNDRNSVVVPPPRKETILQKRNI 1417          
BLAST of Ggra7468.t1 vs. uniprot
Match: A0A1Y1Z337 (DNA-directed RNA polymerase subunit n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z337_9FUNG)

HSP 1 Score: 1207 bits (3123), Expect = 0.000e+0
Identity = 686/1471 (46.63%), Postives = 906/1471 (61.59%), Query Frame = 0
Query:   33 KKDTVEQSAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRLARSKVKTSLHHEIW----EKAKRVKDCLYCGRRNGVVKKTSVLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCALKDEEDPVLSPFELG-FQGEELVN------------DLREDLLDAKLVPDGDQEENKGGLDHCLTEV----GEYLKKVSDV------GKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEKNTSAVFQRRDILLDSYPSFGV 1476
            K+  VE  +AP RIK I+FG+ S +++   A   V  R++Y   DR+ ++ G LD RLG  DK A+CETC  K   C+GH+GYV+L LPVFH GYF++ + ILQ ICK CSRV+L E  R+ YL+RL   +++      I     +K K+V  C YCG  NGVVKK   L+I H     K                T      F   FE A +  P+LK H+ K+ + +NP+RV  LF+ IT+ED +LL ++PE GRPE  L + LPVPP+CIRPSV  D A  S EDDLT+K  EI+  N +I   LEKGG+  N+ E W+ LQ  V  YINS+ PGL    G GK +R                          RTVISPDPNL IDQV VP +VAK+LTFPER    N+E LR  + NG   +PGAN +   +G +K+LKY NRE++A +L  G +VERHL DGD+ LFNRQPSLH++SIMAH V + P RTFRFNECVC+PYNADFDGDEMNLHVPQT+EAR EA+ELMGV  N+ TP++GEPL+AATQDFITASYL++SK+ F +RS+F ++ + + +A   I +PPPAI KPV +WTGKQ+++ L++               PN         K S   V  E   +  +K     G  P +CP D Y+  +  ELMCG + K  +GDG+K S+ Y++ R+ G   AA  MNR+A+  ARWLA+  FSIG+ DV P   LR  K + +  + Q+C E++    +GELE QPGC   +TLE+ +   L  +R      C   L+ + NA L M++ GSKGS +N+ QM+ACVGQQ+I G R PDGF  R LPHF +   +  P AKGFV NSF+SGLT TEFF HA SGREGL DTAVKTAETGYMQRRL+KALEDL+  YD +VRSS G VVQ  YGDDGLDP  +E D G+PV F R L  V       +D  L P+++     EEL              +  E  +   +V    +   K G++  L E         KK+S         K  +   Q+K FL    +K  +A IEPG+AVGA+GAQSIGEPGTQMTLKTFHFAG  +M++T GVPR+KEIINA+K ISTP+  + LV   +++SARIVKGR+E T LG + + I+EVYR    YI I++D+  I  LQL+  +  +A  I+  +  K+++T  +V + +PD++R+    KE S                      Y+ LQ+LK  LP V + GI SV+RAVIS+  TGG  + QL +    + ++M T G+ GT+ + NH+M ++K LGIE AR++I HE+Q T+  HG+T+D  H+ LL D MT  G VLGITRFGI KM+ S LMLASFE T +HLF AA+++K D I GVSE IIMG+P+P+GTGLF+L  +S ++      + R +L D+ P F V
Sbjct:    2 KEHVVE--SAPKRIKHIQFGVLSPQQMMKLAEFEVTQRDLYNIPDRTTVKHGVLDMRLGTSDKTALCETCGLKMADCVGHYGYVKLCLPVFHIGYFRSIITILQNICKTCSRVLLEEGDRRIYLKRLRAPRLENLQRRNIVKAVNDKCKKVVYCTYCGATNGVVKKVGPLKITHEKFRAK---------------RTASEQEAFKQTFENAIAFTPELKAHVGKAQEDMNPLRVFQLFEKITSEDCELLGLDPEEGRPESYLWRALPVPPVCIRPSVAQDGA--STEDDLTVKLTEIIFTNALIKAGLEKGGSIMNLMEQWEFLQLSVGMYINSDIPGLANNMG-GKPIRGFCQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLRIDQVAVPEYVAKVLTFPERVFEHNIERLRKNVLNGPDVHPGANFIVQGNGFKKYLKYANREQIAADLRIGDVVERHLSDGDVALFNRQPSLHKLSIMAHYVTVKPWRTFRFNECVCSPYNADFDGDEMNLHVPQTEEARMEAIELMGVKNNLVTPRNGEPLIAATQDFITASYLLSSKDRFYNRSQFVQICSYMQDANIHIDIPPPAIRKPVMLWTGKQIFNVLMR---------------PN---------KQSKVMVNLETKCRSFEKK---EGRAPDLCPSDGYLVIQNSELMCGVMDKSIVGDGNKYSLFYVVLRDYGANEAAIRMNRLAKLCARWLANQGFSIGISDVQPGYVLRTKKDALVETAYQQCDELIFKSKNGELENQPGCDEDQTLESHISGVLSKIRDDAGQICLTELNKY-NAPLIMSICGSKGSKINVCQMVACVGQQIISGSRIPDGFVDRSLPHFLIN--SKTPPAKGFVRNSFYSGLTPTEFFFHAVSGREGLVDTAVKTAETGYMQRRLMKALEDLTTHYDLSVRSSSGGVVQFCYGDDGLDPATLEGD-GQPVEFSRNLMHVRGVTPVGKDHPLLPYQITKITREELKKPAFTKVCNSAFLESVETFVREHVVEQLAEIRGKNGMNEALDEPKVPNANIDKKISPAVRKMINNKLTITEPQLKAFLNICLSKYMKAKIEPGSAVGALGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIITSKLVCDDNIQSARIVKGRIEKTLLGDIAEFIEEVYRPEECYIGIKIDLDAIQKLQLETDLYQIANAIV--AAPKLKITTSNVQVHKPDRVRVYVPQKEASTL--------------------YYNLQALKRALPQVIIKGIPSVNRAVISEV-TGG--KVQLLVEGYGLREVMTTEGIVGTETTSNHVMEIQKVLGIEAARNTICHEIQYTMSKHGMTIDPRHVMLLGDIMTYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAAMYAKRDSIEGVSECIIMGIPMPIGTGLFKLIHKSEQETLP---KPRSLLFDN-PEFHV 1392          
BLAST of Ggra7468.t1 vs. uniprot
Match: A4RTE2 (DNA-directed RNA polymerase subunit n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RTE2_OSTLU)

HSP 1 Score: 1181 bits (3054), Expect = 0.000e+0
Identity = 671/1427 (47.02%), Postives = 873/1427 (61.18%), Query Frame = 0
Query:   40 SAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNA-VCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRLARSKVKTS----LHHEIWEKAKRVKDCLYCGRRNGVVKKTS-VLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQ-QGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGH-KKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCALKDEEDPVLSPFELGFQGEELVNDLREDLLDAKLVPDGDQEENK-----GGLDHCLTE-----VGEYLKKVSDVGKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQL 1448
            ++ P +I A++F + S+ EI       V  R +Y+   R+ +  G LDPR+G  DK    C TC      C GHFGY++L LPVFH GYFK  + +LQ +CK CSR++L+ED +  +L+R    +++ +    L+ ++ EK KR + C +CG  NGV K+    L+I+H      P   +                  F   FE A   N  L+  LPK  D LNP+RVL + + +T+ D +LLD+     RPE LL+ +LPVPP CIRPSV  D  +GSNEDD+TMK  +I+ +N V+ Q LEKG   +N+ E+WD LQ + A YINSE PGL LQ QG GK LR                          RTVISPDPNL ID+VGVPIH+AK +T+PE     NM MLR  +RNGM ++PGAN V+F  G  ++LKYG+R K+A EL  G IVERHL DGDI+LFNRQPSLH++SIMAHK +I   RT RFNECVC PYNADFDGDEMN+H PQT+EAR EA++LMGV  N+CTPK+GE L+AATQDF+TA++L+T K+ F DRS+F  + A + +A  ++ LP PAILKP+E+WTGKQ++S LI+  A       H+                   YV  EVAEK + KKD         MCP D YV  +  E++ GQLGK +LG G+K  + Y+L  E G E+AA AMNR+A+  ARWL    FSIG+DDV P+  L   K   I +  + C E + +Y+ G L LQ GC A ETLEA ++  L  +R    +AC   L    NA L MAL GSKGS +NI+QMIACVGQQ +GG R PDGF  R LPHF  G     P AKGFVANSFFSG+  TEFF H  +GREGL DTAVKTAETGYM RRL+KALEDLS+QYD TVR+S G +VQ+ YGDDG++P  ME++  +P+ F R L  V        +P  +   L    ++   + R   +D +    G+  E +      G+     E     +   ++  SD G +   R Q+K FL     K     IEPGTAVGAIGAQSIGEPGTQMTLKTFHFAG  +M+IT GVPR+KEIINASK ISTP+  A L+   DVK+AR+VKGRVE TTLG +   I  V R    Y+ + LDM+ I+ LQLD++I SV   ++     K+++  + V+I   + L + P                       +E      LQ ++L +P V V GI SV RAVI+D   G    Y L +   N+  +M   G+ GT+   NH+M  E+TLGIE AR  I+ E+ +T+GAHG+++D+ H  LLAD MT  G VLGITRFG+ KM+ S LMLASFE T +HLF AA+H + D I GVSE IIMG+P+P+GTG+F+L
Sbjct:   28 ASTPRKISAVRFSLMSSSEIGRAGVFHVFERNLYQMPQRTPMPNGILDPRMGTTDKRGGECATCRGNMVDCAGHFGYIKLELPVFHIGYFKNIISVLQCVCKNCSRILLNEDDQDMFLKRYRNPRLEITQRRLLYKKLTEKCKRCRTCPHCGDYNGVTKRAGQTLKIVHEKYSKNPALLEE-----------------FMKEFETALKYNEQLRASLPKVQDDLNPIRVLGILQRVTSADCELLDIA---DRPEHLLLTHLPVPPCCIRPSVEMDGVSGSNEDDITMKLIQIIEVNNVLRQGLEKGLAVNNMMENWDFLQIQCAMYINSELPGLSLQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSARTVISPDPNLRIDEVGVPIHIAKTMTYPEVVNKHNMVMLRERVRNGMAKHPGANFVKFASGGMQYLKYGDRRKIASELKFGDIVERHLHDGDILLFNRQPSLHKMSIMAHKARIMECRTLRFNECVCTPYNADFDGDEMNIHCPQTEEARAEAMQLMGVQHNLCTPKNGEILIAATQDFLTAAFLLTIKDAFFDRSQFGSLVAYMGDALLSVDLPTPAILKPIELWTGKQVFSVLIRPKASD-----HI-------------------YVNLEVAEKLYNKKDKT-------MCPDDGYVCIQNSEIISGQLGKATLGSGNKSGLFYVLNIEYGAEAAANAMNRLAKLSARWLGTRGFSIGIDDVSPAAELSAEKGRRIEDGYRTCDERIASYEKGTLPLQAGCNAEETLEAEVLGVLSAVREAAGNACLKALP-RRNAPLIMALCGSKGSTINISQMIACVGQQAVGGSRPPDGFAERSLPHFRRG--EKTPAAKGFVANSFFSGMRPTEFFFHTMAGREGLVDTAVKTAETGYMSRRLMKALEDLSLQYDGTVRNSMGGIVQLRYGDDGMEPTMMESEDAQPIEFKRCLMNVRGLNSARGEPPATRSALDAALDQFKRNNRIINVDEE----GESAETRELVYSAGISQLFYENMRTFIINEVESPSD-GVYMSDR-QMKAFLDACARKYTEKRIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITASLMSDRDVKAARVVKGRVEKTTLGEICSEINIVVRPHDLYLELMLDMEAINQLQLDVTIHSVRLAVL--GAPKLKLKPQHVLIAGENILHVLP------------------SEEALIEKRALFTLQHMRLAIPAVIVQGIPSVGRAVINDKGDG---TYNLIVEGVNLQSVMGIEGIKGTETRTNHVMECERTLGIEAARACIIEEIDSTMGAHGMSIDNRHSMLLADVMTYKGEVLGITRFGMAKMKDSVLMLASFEKTTDHLFDAALHGRTDYIDGVSECIIMGIPMPIGTGMFRL 1371          
BLAST of Ggra7468.t1 vs. uniprot
Match: A0A1Y1I6L5 (DNA-directed RNA polymerase subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I6L5_KLENI)

HSP 1 Score: 1180 bits (3053), Expect = 0.000e+0
Identity = 677/1473 (45.96%), Postives = 895/1473 (60.76%), Query Frame = 0
Query:   16 APFSTASFNVRPPRITKKKDTVEQSAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRLARSKV----KTSLHHEIWEKAKRVKDCLYCGRRNGVVKK-TSVLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCALKDEEDPVLSPFELGFQGEELVNDLREDLLDAKLVPDGDQEENKGGLDHCLTEVGEYLKKVSDVGKFKLRR----------------------------SQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEK 1455
            AP ST +F       TKK         P +IK+I+FG+ SA+E+   + L V  R +Y+Q +R     G LD +LG  DK   C TC  K   C GHFG++RL LPV H GYFK  + ILQ ICK C+R++L ED R+ +L+R     V    K ++  ++ ++ KR + C +CG  NGVVKK T  L+IMH          K         D  EE        F+  A  N +LK HL K  D LNP+R+L LF+ I  ED ++LD++   GRPERL++ +L VPP+CIRPSV  + AAGSNEDD+TMK  +I+ +N ++   L+KG   + + ESWD LQ + A YINSE PG+P+    GK LR                          RTVISPDPNL I++V VPI +A+IL++PE+    N+E LR  + NGM ++PGAN V FPDG + FLK+G+R ++A EL  G +VERHL DGDIVLFNRQPSLH++SIM+H+ +I P RT RFNECVC PYNADFDGDEMNLHVPQT+EARTEA+ELMGV  N+CTPK+GE L+AATQDF+T ++L+T K+ F DR++F      + +A   + LP PAILKPVE+WTGKQ+++ L++ +AR+                          ++   V E+ + K  + P     MCP D YV FR  +L+ GQLGK +LG G+K  +  +L R+   E AA  MNR+A+F AR++ +  FSIG+DDV P   L   K   I +    C   + AY  G+L LQ GC A ETLEA +  EL+ +R +    C   L    N+ LTMA  GSKGS +NI+QM+ACVGQQ + G RAPDGF  R LPHF        P AKGFVANSF+SG+T  EFF H   GREGL DTAVKTAETGYM RRL+K+LEDLS  YD TVR+S G +VQ+ YGDDG+DP+ ME   G+PV+  R +         +  PVL+P E+    E + N L ++  DA       +  N+         + ++LK  SD  +   +R                             Q++ FL    ++  +  IEPG+AVGA+GAQSIGEPGTQMTLKTFHFAG  +M+IT GVPR+KEIINASK ISTP+    LV   D+K+ARIVKGR+E TTLG V  HI+ V     A+IS++LDM  I +LQL I   +V + I+  +  K+++    + ++R +KL + P            Q+R K           +  LQSL+  LP V V GI +V RAVI+D S  G   Y L +   N+A +M   GVDG +   NHI+ +E TLGIE AR +I+ E++ T+G+HG+T+D  H+ LLAD MT  G +LGITRFGI KM+ S LMLASFE T +HLF AAIH + DQI GVSE IIMG+P+P+GTGLF+L ++ A+K
Sbjct:   13 APESTIAF-------TKKM--YRDDPGPRKIKSIQFGVMSAQEMVKVSELHVFERNLYQQPERKPAPNGILDTKLGTTDKRGECSTCKGKLTDCAGHFGHIRLALPVLHIGYFKHCIAILQCICKSCARILLPEDERKVFLRRFRNPSVEILQKKAMFKKVADRCKRQRYCPHCGDVNGVVKKATQTLKIMH---------DKYAKDVSIKEDFQEE--------FQEPAKHNRELKTHLNKVQDDLNPIRILGLFERILDEDCEILDVH---GRPERLVMTHLIVPPVCIRPSVEMESAAGSNEDDITMKLMQIIEVNKIVEDALQKGLAINQVMESWDFLQVQTAMYINSELPGMPMAFQSGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRINEVAVPILMAQILSYPEKVNRHNIEKLRQRVLNGMTKHPGANFVCFPDGGKWFLKFGDRRRVASELKYGDVVERHLEDGDIVLFNRQPSLHKMSIMSHRARIMPWRTLRFNECVCNPYNADFDGDEMNLHVPQTEEARTEAIELMGVHNNLCTPKNGEILIAATQDFLTTAFLVTHKDNFYDRAQFGLFCCYLGDASEMVDLPTPAILKPVELWTGKQVFNVLVRPSARTR------------------------IFINLVVKERFYTKSKVEPEH---MCPSDGYVCFRNSDLISGQLGKATLGAGNKNGLFTVLLRDYSAEVAAACMNRLAKFSARFIGNHGFSIGIDDVAPGPKLSVEKEKQIAKGYSACDAHIQAYAKGKLALQAGCNAAETLEAEITGELNKIREEAGKVCLRELHWR-NSPLTMAQCGSKGSTINISQMVACVGQQTVSGHRAPDGFISRSLPHFPKF--DKTPRAKGFVANSFYSGMTPDEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTMYDGTVRNSSGGIVQLKYGDDGMDPVCMEAKDGQPVDLTRVMMKTKAQSPLQGRPVLTPSEMD---EFVQNRLSQE--DASTASGCSELFNRS--------LAKFLKGESDAVRETRKRLGLTDKTEPGEEGSAPERAAASIRGWTARQLEIFLDTCISRYHQKRIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITVKLVSEHDLKAARIVKGRIEKTTLGEVADHIQTVLEPGRAFISVRLDMDRIQSLQLGIDAITVGDSIV--NAPKMKIKHSHIRVIRRNKLIVFP----------PDQDRGKM----------FFALQSLRNALPRVIVKGIPTVDRAVINDTSKDGVRSYNLLVEGTNLAAVMGIEGVDGLETRSNHIIEVEHTLGIEAARTAIMREIEYTMGSHGMTIDLRHMMLLADVMTYKGEILGITRFGIAKMKDSVLMLASFEKTTDHLFDAAIHGRTDQIEGVSECIIMGIPMPIGTGLFKLRQRIAKK 1391          
BLAST of Ggra7468.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064498C4 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064498C4)

HSP 1 Score: 1179 bits (3051), Expect = 0.000e+0
Identity = 679/1479 (45.91%), Postives = 903/1479 (61.05%), Query Frame = 0
Query:   34 KDTVEQSAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRLARSKV----KTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCALKDEEDPVLSPFELG--------------------------FQG--------EELVNDLREDLLDAKLVPDGDQEENKGGL-----DHCLTEVGEYLKKVSDVGKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEKNTSAVFQRRDILLD 1469
            K+ ++    P +I  I+FGI S +++   +H+ + NRE++ Q  R+ +  G LD RLG  DK+ +C+TC      C+GHFGY+ L LPVFH GYFK    ILQMICK C+ ++L ED +Q +L+++   K+    + SL  +I+ + ++ K C  C    G VKK S L+++H     K                 +E    F   F+ A   N +LK H+ K+ + LNP+ VLNLFK I+ +D +LLDM+PE GRPERL++ +L VPP+ IRPSV  D  +GSNEDDLTMK ++I+H+N  I   ++K    + I E WD+LQ   A YINSE PGLPL     K +R                          RTVISPDPNL ID+V VP  +A  +TFPER   +N++ L+  + NG  ++PGAN++ + DG +K+LKYGNREK A EL PG IVERH++DGD+VLFNRQPSLH++SIMAHK ++ P RT RFNECVC PYNADFDGDEMNLH+PQT+EAR EAL LMGV  N+ TP++GEPLVAATQDF+T+SYLI+ ++ F DRS F+ +    ++A   I LPPPAI+KP+E+WTGKQ++  L++ + RS     HV+ N                    E   + ++K+L        MCPRD YV FR  ELMCG + K  +G G+K S+ +IL R+     AA  M R+A+  AR+L D  FSIG+ DV PS  L   K + I   + +C+E + AY  G++  Q GC+  +TLEA +   L  +R +    C   L  H N+ L MAL GSKGS++NIAQMIACVGQQ + G R P+GF  R  PHF++   A  P AKGFVANSF++G+  TEFF H   GREGL DTAVKTAETGYMQRRL+KALEDLS QYD TVR S G +VQ +YGDDGLDP  ME    +PV+F R + +V    +   +P L P+E+                           F G        EELV  LR+ L       DGD E +         D   T   +  +KV D    ++  SQ+  FL     K  RA IEPGTAVGA+GAQSIGEPGTQMTLKTFHFAG  +M++T GVPR+KEIINA+KTISTP+  A L    D++SARIVKGR+E TTLG V   IKEV+R    YI+++LD   I + QLDI  ES+ + I+    +K++V +E  I ++ DKLRI P                 +  R+ M     + LQ LK  LP+V V GI +V+R VIS        +YQL +   ++  +M T G+ GT  + NHIM +EK LGIE  R +I+ E+Q  + +HG+++DS H+ LL+D M+  G +LGITRFGI KM+ S LMLASFE T +HLF AA+H ++D I GVSE IIMG+P+PLGTGLF+L   S + N      R+ +LL+
Sbjct:    3 KELIKMDDGPKKIGHIQFGILSPDDMIRLSHVEIINRELFNQEKRTAMAYGCLDNRLGTSDKSVICQTCGLSIVDCVGHFGYIELQLPVFHIGYFKNITNILQMICKNCACILLDEDKKQLFLRKIRNRKLDVLQRRSLLKKIYTECRKKKTCPRCNSVQGSVKKVSALKLIHERYKGK----------------NDEYIRDFISNFDEAIKYNSELKAHIKKAQEDLNPLVVLNLFKRISFQDTELLDMSPELGRPERLILTHLLVPPVSIRPSVPMDGGSGSNEDDLTMKLSDILHINEHIRSNVDKVDMGA-IMEDWDYLQASCAIYINSELPGLPLHLKPQKPIRGLSQRLKGKTGRFRGNLSGKRVDFSGRTVISPDPNLNIDEVAVPHLIALTMTFPERVAEYNLKRLQRYVLNGPDKHPGANYIIYADGEKKWLKYGNREKFAAELKPGDIVERHIIDGDVVLFNRQPSLHKLSIMAHKARVMPWRTLRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALILMGVTNNLITPRNGEPLVAATQDFLTSSYLISRRDAFYDRSRFAHMCTHFADAYEHIDLPPPAIMKPMELWTGKQIFEVLLRPSIRS-----HVLVN-------------------LETKSRTYEKNLF-------MCPRDGYVCFRNSELMCGSIDKAIIGGGNKNSLFHILMRDFTPAIAANCMTRLAKLCARFLGDQGFSIGIPDVKPSVDLNAKKDAIIARGNDKCEEFLDAYRKGQMAAQSGCSVEQTLEAKMNSVLSEIRDECGKLCVKELP-HFNSPLIMALCGSKGSNINIAQMIACVGQQTVNGTRIPNGFTNRTTPHFKIN--AKEPPAKGFVANSFYTGMIPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLMKALEDLSTQYDYTVRDSIGGIVQFTYGDDGLDPAGMEAK-DRPVDFLRAMMSVKATKQFRNEPSLKPYEIRKLLEVNLQSNKFSQCSDLFKDEIRTFFNGKPKQEGYIEELVR-LRKALGLPTYFEDGDVEMDLDVFEPTDNDEDRTISTKATEKVIDQI-HRMTTSQLDIFLEICLDKYNRAKIEPGTAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKTISTPIITATLNCDNDIRSARIVKGRIEKTTLGQVALFIKEVFRNGGCYIAVKLDRNFIESHQLDIDGESIKKSILS---AKLKV-KEKNISVKDDKLRITP----------------PDATRELM----LYSLQFLKNNLPNVIVRGIPTVNRVVISKIDEK-LEKYQLLVEGYDLCHVMATAGIKGTHTTSNHIMEVEKVLGIEAVRATIMSEIQMIMTSHGMSIDSRHVMLLSDLMSFKGEILGITRFGIAKMKESVLMLASFEKTTDHLFDAAVHRRQDDIVGVSECIIMGIPVPLGTGLFKLLYSSRKTN----LPRKQLLLN 1398          
BLAST of Ggra7468.t1 vs. uniprot
Match: D3BKC8 (DNA-directed RNA polymerase subunit n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BKC8_POLPP)

HSP 1 Score: 1172 bits (3031), Expect = 0.000e+0
Identity = 668/1473 (45.35%), Postives = 900/1473 (61.10%), Query Frame = 0
Query:   34 KDTVEQSAAPNRIKAIKFGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCETCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSEDIRQRYLQRLARSKV----KTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRIMHYPLDNKPPSKKXXXXXXXXXDETEENSPVFDPVFEMAASQNPDLKKHLPKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLCIRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWDHLQYEVARYINSEQPGLPLQQGVGKSLRXXXXXXXXXXXXXXXXXXXXXXXXXXRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNGMQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLFNRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQTQEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRSEFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGARSHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRDTYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIARFGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGELELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAGSKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKGFVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDLSVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCALKDEEDPVLSPFELG--------------------------FQGEELVNDLREDLLDAKLVPDGDQEENKGGLDHCLTEVGEYLKKVSDVGKF--------KLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVAPLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTIHTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSFGEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISDCSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGARHSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTSTLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFRQSAEKNTSAVFQRRDILL 1468
            K+ ++    P +I  I+FGI S +++ S +H+ + NRE+++Q +R  ++ G LD RLG  DK+ +C+TC      C+GHFGY++L LPVFH GYFK    ILQMICK CS ++L ++ +  +L+++   K+    + +L  +I+ + ++ K C  C    G VKK S L+++H     K                 +E    F   F+ A   N ++K H+ K+ + LNP+  LNLFK IT++D +LLDMNPE GRPERL++ ++ VPP+CIRPSV  D  +GSNEDDLTMK ++I+H+N  I   ++K    + I E WD+LQ   A YINSE PGLPLQ    K +R                          RTVISPDPNL ID+V VP  +A  +T+PER   +N+  L+  + NG  ++PGAN++ +PDG +K+LKYGNREKLA EL PG IVERH++DGD+VLFNRQPSLH++SIMAHK ++ P RT RFNECVC PYNADFDGDEMNLH+PQT+EAR EAL LMGV  N+ TP++GEPLVAATQDF+T+SYLI+ ++ F DR+ F+ +    ++A   I +PPP ILKP+E+WTGKQL+  L++ + +S     HV+ N                    E   + ++K+L        MCP+D YVYFR  ELMCG + K  +G G+K S+ +IL R+     AA AM R+A+  AR+L D  FSIG+ DV PS  L   K + I     +C + + AY  G+L  Q GCT  +TLE+ +   L  +R +    C   L  H N+ L MAL GSKGS++NIAQMIACVGQQ + G R P+GF  R  PHF +   A  P AKGFVANSF++G+  TEFF H   GREGL DTAVKTAETGYMQRRL+KALEDLS QYD TVR S G +VQ  YGDDGLDP  ME    +PV+F R + +V    +   +  L P+++                           F G+       E+LL  +   +    E  G  D  +T V +         +F        ++ +SQ++ FL     K  RA IEPGTAVGA+GAQSIGEPGTQMTLKTFHFAG  +M++T GVPR+KEIINA+KTISTP+  A L    D++SARIV GR+E  TLG V   IKEV+R    YI+I++D K I + QLDI  ES+   II     K++   + VI    DK+R+ P   +TS  E+ + N                 LQ LK  LP+V V GIS+V+R VI +     + +Y+L I   ++  +M T G++GT  + NH+M +EK LGIE  R +I+ E+Q  +  HG+++DS H+ LLAD M+  G +LGITRFGI KM+ S LMLASFE T +HLF AA+H ++D I GVSE IIMG+P+PLGTGLF+L   S + N      R+ +LL
Sbjct:    3 KELIKVDDGPKKIGHIQFGILSPDDMISLSHVEIINRELFDQSNRGPMQYGCLDNRLGTSDKSIICKTCGLSIVDCVGHFGYIKLQLPVFHIGYFKNITNILQMICKGCSAILLDDEKKTTFLRKIRNRKLDVLQRRALLKKIYLECRKKKFCPRCNMVQGTVKKVSALKLVHERYKGK----------------NDEYIRDFLSNFDEAIKYNSEMKGHIKKAQEDLNPLVALNLFKRITSQDTELLDMNPELGRPERLILTHILVPPVCIRPSVPMDGGSGSNEDDLTMKLSDILHINENIRTNVDKMEMVA-IMEDWDYLQASCAIYINSELPGLPLQMKPQKPIRGLSQRLKGKTGRFRGNLSGKRVDFSGRTVISPDPNLNIDEVAVPHLIALTMTYPERVAEYNLTRLQKYVINGPDKHPGANYIIYPDGEKKWLKYGNREKLAAELKPGDIVERHIIDGDVVLFNRQPSLHKLSIMAHKARVMPWRTLRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALILMGVTNNLITPRNGEPLVAATQDFLTSSYLISRRDAFYDRTRFAYMCTHFADAYEHIDMPPPTILKPIELWTGKQLFEVLLRPSVKS-----HVLVN-------------------FETKSRTYEKNLY-------MCPKDGYVYFRNSELMCGSIDKSIIGGGNKNSLFHILMRDFTPAIAANAMTRLAKLCARFLGDQGFSIGIPDVKPSFELNAKKDAIIAVGHGKCDQFLTAYKAGKLPAQSGCTVEQTLESKMNSVLSDIRDECGKLCIKELP-HYNSPLIMALCGSKGSNINIAQMIACVGQQTVNGTRIPNGFTNRTTPHFPIN--AKEPPAKGFVANSFYTGMIPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLMKALEDLSTQYDYTVRDSIGGIVQFIYGDDGLDPAGMEAK-ERPVDFARAMMSVKSTKQCRNEESLRPYKIKLLLESQLKSSKFAQCTDLFKDEIRSFFYGKPKQEGYIEELLKLRKSFNLPSYEVDG--DQTMTSVEDEPPARLTPDQFEHLVDQIHRITKSQLELFLEICLDKYSRARIEPGTAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKTISTPIITATLNCDDDIRSARIVAGRIEKVTLGQVAIFIKEVFRNAGCYITIKIDKKFIDSQQLDIDPESIRRAIIGTKILKLK--EKHVIASGDDKIRVEPV--DTS-REMMLYN-----------------LQFLKNNLPNVIVRGISTVNRVVIDE----KNGKYKLLIEGYDLLHVMTTAGINGTHTNSNHMMEVEKYLGIEAVRQTIIDEIQMIMINHGMSIDSRHVMLLADLMSFKGEILGITRFGIAKMKESVLMLASFEKTTDHLFDAAVHRRQDDIVGVSECIIMGIPVPLGTGLFKLLYNSRKTN----LPRKSLLL 1391          
The following BLAST results are available for this feature:
BLAST of Ggra7468.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGS10.000e+085.98DNA-directed RNA polymerase subunit n=1 Tax=Gracil... [more]
R7QR740.000e+061.13DNA-directed RNA polymerase subunit n=1 Tax=Chondr... [more]
A0A7S3E8Q30.000e+048.46DNA-directed RNA polymerase subunit n=3 Tax=Rhodos... [more]
A0A1X6P7A60.000e+047.98DNA-directed RNA polymerase subunit n=1 Tax=Porphy... [more]
M2X7C80.000e+045.90DNA-directed RNA polymerase subunit n=1 Tax=Galdie... [more]
A0A1Y1Z3370.000e+046.63DNA-directed RNA polymerase subunit n=1 Tax=Basidi... [more]
A4RTE20.000e+047.02DNA-directed RNA polymerase subunit n=1 Tax=Ostreo... [more]
A0A1Y1I6L50.000e+045.96DNA-directed RNA polymerase subunit n=1 Tax=Klebso... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064498C40.000e+045.91hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BKC80.000e+045.35DNA-directed RNA polymerase subunit n=1 Tax=Polysp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006592RNA polymerase, N-terminalSMARTSM00663rpolaneu7coord: 287..591
e-value: 5.5E-160
score: 547.5
IPR000722RNA polymerase, alpha subunitPFAMPF00623RNA_pol_Rpb1_2coord: 397..563
e-value: 6.2E-71
score: 238.0
NoneNo IPR availableGENE3D1.10.150.390coord: 1401..1445
e-value: 2.9E-18
score: 67.5
NoneNo IPR availableGENE3D3.30.1490.180RNA polymerase iicoord: 430..490
e-value: 3.9E-80
score: 270.1
NoneNo IPR availableGENE3D2.40.40.20coord: 389..570
e-value: 3.9E-80
score: 270.1
NoneNo IPR availableGENE3D6.20.50.80coord: 948..1000
e-value: 5.7E-19
score: 69.3
NoneNo IPR availableGENE3D6.10.250.2940coord: 892..947
e-value: 1.8E-24
score: 86.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..234
NoneNo IPR availablePANTHERPTHR19376:SF32DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1coord: 36..1450
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 40..1450
IPR044893RNA polymerase Rpb1, clamp domain superfamilyGENE3D4.10.860.120RNA polymerase II, clamp domaincoord: 34..168
e-value: 9.3E-32
score: 111.4
IPR038120RNA polymerase Rpb1, funnel domain superfamilyGENE3D1.10.132.30coord: 769..886
e-value: 5.6E-31
score: 109.1
IPR007066RNA polymerase Rpb1, domain 3PFAMPF04983RNA_pol_Rpb1_3coord: 566..768
e-value: 1.5E-32
score: 112.7
IPR007080RNA polymerase Rpb1, domain 1PFAMPF04997RNA_pol_Rpb1_1coord: 44..395
e-value: 1.8E-83
score: 280.5
IPR007081RNA polymerase Rpb1, domain 5PFAMPF04998RNA_pol_Rpb1_5coord: 909..1401
e-value: 6.5E-80
score: 268.4
IPR042102RNA polymerase Rpb1, domain 3 superfamilyGENE3D1.10.274.100RNA polymerase Rpb1, domain 3coord: 571..768
e-value: 7.4E-45
score: 154.8
IPR007083RNA polymerase Rpb1, domain 4PFAMPF05000RNA_pol_Rpb1_4coord: 797..888
e-value: 3.9E-21
score: 75.0
IPR045867DNA-directed RNA polymerase, subunit beta-primePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 36..1450
IPR035698DNA-directed RNA polymerase III subunit RPC1, C-terminalCDDcd02736RNAP_III_Rpc1_Ccoord: 1084..1446
e-value: 5.3338E-141
score: 432.027
IPR035697DNA-directed RNA polymerase III subunit RPC1, N-terminalCDDcd02583RNAP_III_RPC1_Ncoord: 55..959
e-value: 0.0
score: 1340.66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:122519..127041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7468.t1Ggra7468.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 122519..127041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7468.t1 ID=Ggra7468.t1|Name=Ggra7468.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1477bp
MCMETSVHEEGNSSTAPFSTASFNVRPPRITKKKDTVEQSAAPNRIKAIK
FGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCE
TCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSED
IRQRYLQRLARSKVKTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRI
MHYPLDNKPPSKKKEEDDEDESDETEENSPVFDPVFEMAASQNPDLKKHL
PKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLC
IRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWD
HLQYEVARYINSEQPGLPLQQGVGKSLRGVSQRLKGKTGRFRGNLSGKRV
DFSGRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNG
MQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLF
NRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQT
QEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRS
EFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGAR
SHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRD
TYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIAR
FGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGE
LELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAG
SKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKG
FVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDL
SVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCA
LKDEEDPVLSPFELGFQGEELVNDLREDLLDAKLVPDGDQEENKGGLDHC
LTEVGEYLKKVSDVGKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIG
AQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVA
PLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTI
HTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSF
GEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISD
CSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGAR
HSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTS
TLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFR
QSAEKNTSAVFQRRDILLDSYPSFGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006592RNA_pol_N
IPR000722RNA_pol_asu
IPR044893RNA_pol_Rpb1_clamp_domain
IPR038120Rpb1_funnel_sf
IPR007066RNA_pol_Rpb1_3
IPR007080RNA_pol_Rpb1_1
IPR007081RNA_pol_Rpb1_5
IPR042102RNA_pol_Rpb1_3_sf
IPR007083RNA_pol_Rpb1_4
IPR045867DNA-dir_RpoC_beta_prime
IPR035698RNAP_III_Rpc1_C
IPR035697RNAP_III_RPC1_N