Ggra7468.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7468.t1
Unique NameGgra7468.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1477
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:122519..127041 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005708925.1
Preferred namePOLR3A
PFAMsRNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K03018,ko:K21594
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169
KEGG ModuleM00181
GOsGO:0000428,GO:0000731,GO:0001817,GO:0001819,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006351,GO:0006366,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009987,GO:0010467,GO:0010494,GO:0016070,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0030880,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035770,GO:0036464,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045087,GO:0046483,GO:0048518,GO:0050789,GO:0050896,GO:0051239,GO:0051240,GO:0051716,GO:0055029,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:1990904
Evalue0.0
EggNOG OGsCOG0086@1|root,KOG0261@2759|Eukaryota
EC2.7.7.6
DescriptionDNA-directed 5'-3' RNA polymerase activity
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03029
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7468Ggra7468Gracilaria gracilis GNS1m malegenetig00000102_pilon 122519..127041 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7468.t1Ggra7468.t1Gracilaria gracilis GNS1m malepolypeptidetig00000102_pilon 122519..127041 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7468.t1.stop1Ggra7468.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000102_pilon 122519..122521 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7468.t1.CDS1Ggra7468.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000102_pilon 122519..122900 -
Ggra7468.t1.CDS2Ggra7468.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000102_pilon 122993..127041 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7468.t1.exon1Ggra7468.t1.exon1Gracilaria gracilis GNS1m maleexontig00000102_pilon 122519..122900 -
Ggra7468.t1.exon2Ggra7468.t1.exon2Gracilaria gracilis GNS1m maleexontig00000102_pilon 122993..127041 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7468.t1.intron1Ggra7468.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000102_pilon 122901..122992 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7468.t1.start1Ggra7468.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000102_pilon 127039..127041 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7468.t1 ID=Ggra7468.t1|Name=Ggra7468.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1477bp
MCMETSVHEEGNSSTAPFSTASFNVRPPRITKKKDTVEQSAAPNRIKAIK
FGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCE
TCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSED
IRQRYLQRLARSKVKTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRI
MHYPLDNKPPSKKKEEDDEDESDETEENSPVFDPVFEMAASQNPDLKKHL
PKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLC
IRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWD
HLQYEVARYINSEQPGLPLQQGVGKSLRGVSQRLKGKTGRFRGNLSGKRV
DFSGRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNG
MQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLF
NRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQT
QEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRS
EFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGAR
SHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRD
TYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIAR
FGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGE
LELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAG
SKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKG
FVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDL
SVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCA
LKDEEDPVLSPFELGFQGEELVNDLREDLLDAKLVPDGDQEENKGGLDHC
LTEVGEYLKKVSDVGKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIG
AQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVA
PLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTI
HTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSF
GEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISD
CSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGAR
HSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTS
TLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFR
QSAEKNTSAVFQRRDILLDSYPSFGV*
back to top

spliced messenger RNA

>Ggra7468.t1 ID=Ggra7468.t1|Name=Ggra7468.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=4431bp|location=Sequence derived from alignment at tig00000102_pilon:122519..127041- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGTATGGAGACGTCAGTTCATGAGGAAGGGAACAGCAGCACAGCCCC
GTTTTCCACCGCTTCATTCAACGTTCGACCCCCTCGTATAACGAAAAAGA
AAGATACAGTCGAGCAGTCGGCGGCTCCCAATCGAATTAAGGCTATCAAG
TTTGGAATCGCTTCTGCGGAGGAGATTGCATCCAATGCTCACCTCGTTGT
CAATAACCGTGAGATTTATGAACAGCGCGACCGTTCCCAAATTCGAGGTG
GGGCCCTTGATCCACGGTTAGGAGCAATCGACAAGAATGCTGTTTGTGAA
ACATGTAACCAAAAGCAAGAGCATTGTATAGGCCATTTTGGCTACGTAAG
GCTTGTGTTGCCGGTTTTTCATGCTGGTTACTTCAAAGCAACACTGAAGA
TATTGCAAATGATATGCAAGTTTTGTTCTCGCGTTATGCTGAGTGAGGAC
ATTCGACAACGGTATTTACAGAGACTTGCGAGAAGCAAAGTGAAGACATC
ATTACATCATGAGATCTGGGAAAAAGCGAAGAGAGTGAAGGACTGTCTGT
ACTGCGGGAGAAGGAATGGGGTCGTCAAAAAAACTTCCGTGTTAAGGATC
ATGCATTATCCGCTTGATAACAAGCCGCCTTCAAAGAAGAAAGAAGAGGA
TGATGAAGATGAGAGCGATGAAACAGAGGAGAATTCGCCTGTTTTTGACC
CAGTTTTTGAGATGGCAGCCTCTCAGAACCCGGACCTGAAAAAGCATTTG
CCCAAAAGTGCAGACAGTCTCAACCCCATGCGTGTGCTGAACTTGTTCAA
GAACATTACAGCAGAGGACGTAAAGCTTCTTGACATGAACCCTGAGTTTG
GAAGACCGGAGCGTCTTTTGGTGCAATACCTTCCAGTACCACCTCTATGT
ATTCGACCTTCAGTTTGCTCAGACCCGGCTGCGGGATCAAATGAGGATGA
TTTGACGATGAAGGCAGCCGAAATAGTGCATATGAACACTGTCATAACTC
AACTGCTAGAAAAAGGAGGTACTCCGTCCAACATATATGAAAGCTGGGAT
CATCTGCAGTATGAAGTCGCACGGTACATAAACTCAGAGCAACCAGGGTT
ACCGCTACAGCAAGGGGTAGGAAAGTCTTTACGAGGGGTCAGTCAACGCT
TGAAGGGGAAAACAGGACGTTTCCGTGGTAATCTTTCTGGAAAGCGTGTT
GACTTTTCGGGCAGAACTGTTATTTCACCGGACCCTAATCTTTGTATCGA
CCAAGTTGGCGTTCCGATTCATGTAGCAAAGATATTAACTTTCCCCGAAC
GAGCGACCATGTTCAACATGGAAATGCTTCGAAACCTAATACGGAATGGA
ATGCAGCAGTATCCGGGTGCGAACCATGTCGAATTTCCGGATGGAACGAG
AAAGTTTCTCAAGTATGGTAATCGTGAAAAACTTGCACGGGAATTGGTCC
CGGGAACAATTGTTGAACGCCATCTGCTGGACGGGGATATTGTATTGTTT
AATCGACAACCTAGTCTTCATCGTATTTCGATCATGGCTCACAAAGTCAA
GATATCACCTCATCGAACGTTTCGCTTCAATGAATGCGTGTGTGCCCCAT
ACAATGCTGATTTCGATGGAGATGAAATGAATCTTCACGTTCCTCAAACT
CAGGAAGCCCGGACGGAAGCCTTGGAGCTGATGGGAGTGGTACGAAACAT
ATGTACTCCTAAAAGTGGAGAACCCCTTGTAGCTGCAACGCAAGATTTCA
TTACGGCTTCGTATTTGATTACAAGTAAGAACATGTTCATGGATAGGTCC
GAGTTTTCAAGAGTGGCAGCTATGGTTTCCAATGCTGAATTTACTATCCC
TCTCCCACCTCCTGCAATTTTGAAACCAGTAGAGATGTGGACAGGCAAGC
AGCTATATTCTGCTTTGATCCAGAGTGCGGCACGGTCTGCCGGGGCCCGC
TCTCATGTTGTATACAATCCGAACGAAAGATTTCGTGACACGGGGGTGCT
GAAGCCGAGTATGGCGTATGTGACAACAGAAGTAGCAGAAAAAGGCCACA
AGAAAGATCTCATCCCTCCAGGAGAATTCCCGGGTATGTGTCCGAGAGAC
ACATACGTTTATTTCCGAGGAGGAGAACTCATGTGCGGACAACTGGGAAA
GAAATCGCTAGGAGATGGTTCGAAGAAATCCGTTCTATACATTCTTGCAA
GGGAATGTGGCAACGAATCAGCAGCGTATGCCATGAATCGTATCGCTCGT
TTTGGAGCAAGATGGCTTGCAGATGGAGCATTCTCTATTGGAGTAGATGA
CGTCATGCCGTCAACATCGTTGAGAGAAGCAAAGGCGAGCTACATCAGAG
AGAGTGACCAAAGGTGCAAAGAAATCATGCTTGCATACGACCATGGGGAA
CTTGAATTACAACCGGGATGCACAGCTCGTGAAACTCTAGAAGCAATGCT
AATGAAAGAGTTACACGGTTTGCGGCGAAAAACGGCGGATGCGTGTAAAG
CAGGTCTTGATGTTCATACAAACGCTGGACTCACTATGGCCTTAGCTGGT
TCGAAAGGTTCAGACCTTAACATTGCCCAGATGATCGCTTGTGTAGGACA
GCAAGTAATCGGAGGAAAACGTGCTCCTGATGGTTTCTTTGGCAGATGTC
TCCCACATTTTGAGCTTGGTCTCGGGGCACTTGCTCCACTGGCGAAAGGG
TTTGTTGCAAACAGTTTCTTTAGCGGCTTGACGGGAACAGAATTTTTCAT
GCACGCACAGAGCGGTCGAGAAGGGCTTACTGATACAGCTGTCAAAACAG
CAGAAACGGGGTACATGCAGAGGCGTTTAGTAAAAGCTCTGGAAGATCTG
AGTGTTCAATATGATTCAACTGTTCGTTCTAGTGATGGTTCAGTTGTTCA
AATGTCTTATGGAGATGATGGACTTGATCCACTGCAAATGGAAACGGATA
TTGGGAAGCCTGTCAACTTCGACAGAACGTTGGATGCCGTGACATGTGCC
CTCAAAGATGAAGAAGACCCTGTTCTCAGTCCTTTTGAACTGGGATTCCA
GGGTGAGGAGCTTGTAAATGATCTAAGAGAGGACTTGTTAGATGCCAAGC
TCGTACCGGATGGGGATCAAGAAGAGAACAAAGGGGGCTTGGATCATTGT
CTAACTGAAGTCGGGGAGTATTTGAAGAAGGTCAGCGATGTCGGTAAGTT
CAAATTAAGAAGGTCTCAGGTTAAGGAATTTCTGCGCCAAGTTCAAGCTA
AGACTCGTAGGGCGGCTATCGAACCAGGCACAGCGGTCGGTGCCATAGGT
GCTCAGAGTATTGGGGAACCTGGAACGCAAATGACATTGAAGACGTTCCA
TTTTGCAGGGACAACAACTATGAGCATCACTCAGGGTGTTCCAAGATTGA
AGGAAATCATCAATGCAAGCAAAACGATATCGACTCCCGTTACAGTTGCA
CCACTTGTCTGGAGTACAGACGTGAAGTCTGCACGCATTGTGAAGGGGCG
AGTGGAGAGCACAACGTTGGGGGGAGTGGTGAAGCACATCAAGGAAGTCT
ATCGGGGTCCATACGCTTACATTTCTATTCAGCTAGATATGAAAACAATT
CACACTCTGCAGTTGGATATTAGCATTGAATCTGTGGCGGAAAGGATTAT
ACGTCACTCGTTTTCCAAAGTGCGAGTAACGCGAGAAGACGTTATTATAC
TGCGGCCCGACAAATTGAGGATTAACCCCTTCGTGAAAGAGACAAGTTTT
GGAGAAATAAGTATTCAGAATAGGACGAAGGAAGGACGAAGAAAAAGCAT
GGAAACTCATCCATACCACCTTTTGCAATCATTGAAACTACAATTACCGC
ATGTGTCTGTATGTGGTATCAGTTCTGTGTCTAGAGCCGTGATCAGTGAC
TGCAGTACTGGAGGTTCTCCGGAGTATCAATTAGAAATCCCATCGGAGAA
CATCGCAGATATTATGGTTACACCTGGTGTGGATGGCACGAAGGTTTCAT
GTAATCACATCATGGCAATGGAGAAGACATTAGGGATTGAGGGAGCGAGG
CATTCCATACTACATGAGATGCAAACTACACTCGGGGCGCACGGGCTCAC
TGTGGACAGCCATCATCTCAAGCTTCTAGCAGATTGTATGACCTCAAGCG
GCACGGTTTTGGGTATTACCCGTTTCGGTATTCAGAAGATGAGAACGTCA
ACACTGATGTTGGCGAGTTTCGAGATGACTGTTGAACACTTGTTCCATGC
AGCCATCCACTCAAAGGAGGATCAGATATCAGGGGTGTCAGAGAGAATAA
TCATGGGCGTACCAATACCACTCGGCACTGGTCTCTTCCAATTGTTCAGG
CAATCTGCAGAGAAGAACACTAGCGCTGTGTTTCAGCGAAGAGATATTCT
TCTTGATTCCTACCCTTCGTTTGGAGTGTAA
back to top

protein sequence of Ggra7468.t1

>Ggra7468.t1 ID=Ggra7468.t1|Name=Ggra7468.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1477bp
MCMETSVHEEGNSSTAPFSTASFNVRPPRITKKKDTVEQSAAPNRIKAIK
FGIASAEEIASNAHLVVNNREIYEQRDRSQIRGGALDPRLGAIDKNAVCE
TCNQKQEHCIGHFGYVRLVLPVFHAGYFKATLKILQMICKFCSRVMLSED
IRQRYLQRLARSKVKTSLHHEIWEKAKRVKDCLYCGRRNGVVKKTSVLRI
MHYPLDNKPPSKKKEEDDEDESDETEENSPVFDPVFEMAASQNPDLKKHL
PKSADSLNPMRVLNLFKNITAEDVKLLDMNPEFGRPERLLVQYLPVPPLC
IRPSVCSDPAAGSNEDDLTMKAAEIVHMNTVITQLLEKGGTPSNIYESWD
HLQYEVARYINSEQPGLPLQQGVGKSLRGVSQRLKGKTGRFRGNLSGKRV
DFSGRTVISPDPNLCIDQVGVPIHVAKILTFPERATMFNMEMLRNLIRNG
MQQYPGANHVEFPDGTRKFLKYGNREKLARELVPGTIVERHLLDGDIVLF
NRQPSLHRISIMAHKVKISPHRTFRFNECVCAPYNADFDGDEMNLHVPQT
QEARTEALELMGVVRNICTPKSGEPLVAATQDFITASYLITSKNMFMDRS
EFSRVAAMVSNAEFTIPLPPPAILKPVEMWTGKQLYSALIQSAARSAGAR
SHVVYNPNERFRDTGVLKPSMAYVTTEVAEKGHKKDLIPPGEFPGMCPRD
TYVYFRGGELMCGQLGKKSLGDGSKKSVLYILARECGNESAAYAMNRIAR
FGARWLADGAFSIGVDDVMPSTSLREAKASYIRESDQRCKEIMLAYDHGE
LELQPGCTARETLEAMLMKELHGLRRKTADACKAGLDVHTNAGLTMALAG
SKGSDLNIAQMIACVGQQVIGGKRAPDGFFGRCLPHFELGLGALAPLAKG
FVANSFFSGLTGTEFFMHAQSGREGLTDTAVKTAETGYMQRRLVKALEDL
SVQYDSTVRSSDGSVVQMSYGDDGLDPLQMETDIGKPVNFDRTLDAVTCA
LKDEEDPVLSPFELGFQGEELVNDLREDLLDAKLVPDGDQEENKGGLDHC
LTEVGEYLKKVSDVGKFKLRRSQVKEFLRQVQAKTRRAAIEPGTAVGAIG
AQSIGEPGTQMTLKTFHFAGTTTMSITQGVPRLKEIINASKTISTPVTVA
PLVWSTDVKSARIVKGRVESTTLGGVVKHIKEVYRGPYAYISIQLDMKTI
HTLQLDISIESVAERIIRHSFSKVRVTREDVIILRPDKLRINPFVKETSF
GEISIQNRTKEGRRKSMETHPYHLLQSLKLQLPHVSVCGISSVSRAVISD
CSTGGSPEYQLEIPSENIADIMVTPGVDGTKVSCNHIMAMEKTLGIEGAR
HSILHEMQTTLGAHGLTVDSHHLKLLADCMTSSGTVLGITRFGIQKMRTS
TLMLASFEMTVEHLFHAAIHSKEDQISGVSERIIMGVPIPLGTGLFQLFR
QSAEKNTSAVFQRRDILLDSYPSFGV*
back to top

mRNA from alignment at tig00000102_pilon:122519..127041-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7468.t1 ID=Ggra7468.t1|Name=Ggra7468.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=4523bp|location=Sequence derived from alignment at tig00000102_pilon:122519..127041- (Gracilaria gracilis GNS1m male)
ATGTGTATGGAGACGTCAGTTCATGAGGAAGGGAACAGCAGCACAGCCCC GTTTTCCACCGCTTCATTCAACGTTCGACCCCCTCGTATAACGAAAAAGA AAGATACAGTCGAGCAGTCGGCGGCTCCCAATCGAATTAAGGCTATCAAG TTTGGAATCGCTTCTGCGGAGGAGATTGCATCCAATGCTCACCTCGTTGT CAATAACCGTGAGATTTATGAACAGCGCGACCGTTCCCAAATTCGAGGTG GGGCCCTTGATCCACGGTTAGGAGCAATCGACAAGAATGCTGTTTGTGAA ACATGTAACCAAAAGCAAGAGCATTGTATAGGCCATTTTGGCTACGTAAG GCTTGTGTTGCCGGTTTTTCATGCTGGTTACTTCAAAGCAACACTGAAGA TATTGCAAATGATATGCAAGTTTTGTTCTCGCGTTATGCTGAGTGAGGAC ATTCGACAACGGTATTTACAGAGACTTGCGAGAAGCAAAGTGAAGACATC ATTACATCATGAGATCTGGGAAAAAGCGAAGAGAGTGAAGGACTGTCTGT ACTGCGGGAGAAGGAATGGGGTCGTCAAAAAAACTTCCGTGTTAAGGATC ATGCATTATCCGCTTGATAACAAGCCGCCTTCAAAGAAGAAAGAAGAGGA TGATGAAGATGAGAGCGATGAAACAGAGGAGAATTCGCCTGTTTTTGACC CAGTTTTTGAGATGGCAGCCTCTCAGAACCCGGACCTGAAAAAGCATTTG CCCAAAAGTGCAGACAGTCTCAACCCCATGCGTGTGCTGAACTTGTTCAA GAACATTACAGCAGAGGACGTAAAGCTTCTTGACATGAACCCTGAGTTTG GAAGACCGGAGCGTCTTTTGGTGCAATACCTTCCAGTACCACCTCTATGT ATTCGACCTTCAGTTTGCTCAGACCCGGCTGCGGGATCAAATGAGGATGA TTTGACGATGAAGGCAGCCGAAATAGTGCATATGAACACTGTCATAACTC AACTGCTAGAAAAAGGAGGTACTCCGTCCAACATATATGAAAGCTGGGAT CATCTGCAGTATGAAGTCGCACGGTACATAAACTCAGAGCAACCAGGGTT ACCGCTACAGCAAGGGGTAGGAAAGTCTTTACGAGGGGTCAGTCAACGCT TGAAGGGGAAAACAGGACGTTTCCGTGGTAATCTTTCTGGAAAGCGTGTT GACTTTTCGGGCAGAACTGTTATTTCACCGGACCCTAATCTTTGTATCGA CCAAGTTGGCGTTCCGATTCATGTAGCAAAGATATTAACTTTCCCCGAAC GAGCGACCATGTTCAACATGGAAATGCTTCGAAACCTAATACGGAATGGA ATGCAGCAGTATCCGGGTGCGAACCATGTCGAATTTCCGGATGGAACGAG AAAGTTTCTCAAGTATGGTAATCGTGAAAAACTTGCACGGGAATTGGTCC CGGGAACAATTGTTGAACGCCATCTGCTGGACGGGGATATTGTATTGTTT AATCGACAACCTAGTCTTCATCGTATTTCGATCATGGCTCACAAAGTCAA GATATCACCTCATCGAACGTTTCGCTTCAATGAATGCGTGTGTGCCCCAT ACAATGCTGATTTCGATGGAGATGAAATGAATCTTCACGTTCCTCAAACT CAGGAAGCCCGGACGGAAGCCTTGGAGCTGATGGGAGTGGTACGAAACAT ATGTACTCCTAAAAGTGGAGAACCCCTTGTAGCTGCAACGCAAGATTTCA TTACGGCTTCGTATTTGATTACAAGTAAGAACATGTTCATGGATAGGTCC GAGTTTTCAAGAGTGGCAGCTATGGTTTCCAATGCTGAATTTACTATCCC TCTCCCACCTCCTGCAATTTTGAAACCAGTAGAGATGTGGACAGGCAAGC AGCTATATTCTGCTTTGATCCAGAGTGCGGCACGGTCTGCCGGGGCCCGC TCTCATGTTGTATACAATCCGAACGAAAGATTTCGTGACACGGGGGTGCT GAAGCCGAGTATGGCGTATGTGACAACAGAAGTAGCAGAAAAAGGCCACA AGAAAGATCTCATCCCTCCAGGAGAATTCCCGGGTATGTGTCCGAGAGAC ACATACGTTTATTTCCGAGGAGGAGAACTCATGTGCGGACAACTGGGAAA GAAATCGCTAGGAGATGGTTCGAAGAAATCCGTTCTATACATTCTTGCAA GGGAATGTGGCAACGAATCAGCAGCGTATGCCATGAATCGTATCGCTCGT TTTGGAGCAAGATGGCTTGCAGATGGAGCATTCTCTATTGGAGTAGATGA CGTCATGCCGTCAACATCGTTGAGAGAAGCAAAGGCGAGCTACATCAGAG AGAGTGACCAAAGGTGCAAAGAAATCATGCTTGCATACGACCATGGGGAA CTTGAATTACAACCGGGATGCACAGCTCGTGAAACTCTAGAAGCAATGCT AATGAAAGAGTTACACGGTTTGCGGCGAAAAACGGCGGATGCGTGTAAAG CAGGTCTTGATGTTCATACAAACGCTGGACTCACTATGGCCTTAGCTGGT TCGAAAGGTTCAGACCTTAACATTGCCCAGATGATCGCTTGTGTAGGACA GCAAGTAATCGGAGGAAAACGTGCTCCTGATGGTTTCTTTGGCAGATGTC TCCCACATTTTGAGCTTGGTCTCGGGGCACTTGCTCCACTGGCGAAAGGG TTTGTTGCAAACAGTTTCTTTAGCGGCTTGACGGGAACAGAATTTTTCAT GCACGCACAGAGCGGTCGAGAAGGGCTTACTGATACAGCTGTCAAAACAG CAGAAACGGGGTACATGCAGAGGCGTTTAGTAAAAGCTCTGGAAGATCTG AGTGTTCAATATGATTCAACTGTTCGTTCTAGTGATGGTTCAGTTGTTCA AATGTCTTATGGAGATGATGGACTTGATCCACTGCAAATGGAAACGGATA TTGGGAAGCCTGTCAACTTCGACAGAACGTTGGATGCCGTGACATGTGCC CTCAAAGATGAAGAAGACCCTGTTCTCAGTCCTTTTGAACTGGGATTCCA GGGTGAGGAGCTTGTAAATGATCTAAGAGAGGACTTGTTAGATGCCAAGC TCGTACCGGATGGGGATCAAGAAGAGAACAAAGGGGGCTTGGATCATTGT CTAACTGAAGTCGGGGAGTATTTGAAGAAGGTCAGCGATGTCGGTAAGTT CAAATTAAGAAGGTCTCAGGTTAAGGAATTTCTGCGCCAAGTTCAAGCTA AGACTCGTAGGGCGGCTATCGAACCAGGCACAGCGGTCGGTGCCATAGGT GCTCAGAGTATTGGGGAACCTGGAACGCAAATGACATTGAAGACGTTCCA TTTTGCAGGGACAACAACTATGAGCATCACTCAGGGTGTTCCAAGATTGA AGGAAATCATCAATGCAAGCAAAACGATATCGACTCCCGTTACAGTTGCA CCACTTGTCTGGAGTACAGACGTGAAGTCTGCACGCATTGTGAAGGGGCG AGTGGAGAGCACAACGTTGGGGGGAGTGGTGAAGCACATCAAGGAAGTCT ATCGGGGTCCATACGCTTACATTTCTATTCAGCTAGATATGAAAACAATT CACACTCTGCAGTTGGATATTAGCATTGAATCTGTGGCGGAAAGGATTAT ACGTCACTCGTTTTCCAAAGTGCGAGTAACGCGAGAAGACGTTATTATAC TGCGGCCCGACAAATTGAGGATTAACCCCTTCGTGAAAGAGACAAGTTTT GGAGAAATAAGTATTCAGAATAGGACGAAGGAAGGACGAAGAAAAAGCAT GGAAACTCATCCATACCACCTTTTGCAATCATTGAAACTACAATTACCGC ATGTGTCTGTATGTGGTATCAGTTCTGTGTCTAGAGCCGTGATCAGTGAC TGCAGTACTGGAGGTTCTCCGGAGTATCAATTAGAAATCCCATCGGAGAA CATCGCAGATATTATGGTTACACCTGGTGTGGATGGCACGAAGGTTTCAT GTAATCACATCATGGCAATGGAGAAGACATTAGGGATTGAGGGAGCGAGG TGAGTATTGCACAAGTGAACGACGAAATGGTTGACGATCACGAAAGAATA ATTCTGACGCCCGATTTCATTCTTACATCCTGTCAAAACAGGCATTCCAT ACTACATGAGATGCAAACTACACTCGGGGCGCACGGGCTCACTGTGGACA GCCATCATCTCAAGCTTCTAGCAGATTGTATGACCTCAAGCGGCACGGTT TTGGGTATTACCCGTTTCGGTATTCAGAAGATGAGAACGTCAACACTGAT GTTGGCGAGTTTCGAGATGACTGTTGAACACTTGTTCCATGCAGCCATCC ACTCAAAGGAGGATCAGATATCAGGGGTGTCAGAGAGAATAATCATGGGC GTACCAATACCACTCGGCACTGGTCTCTTCCAATTGTTCAGGCAATCTGC AGAGAAGAACACTAGCGCTGTGTTTCAGCGAAGAGATATTCTTCTTGATT CCTACCCTTCGTTTGGAGTGTAA
back to top

Coding sequence (CDS) from alignment at tig00000102_pilon:122519..127041-

>Ggra7468.t1 ID=Ggra7468.t1|Name=Ggra7468.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=4431bp|location=Sequence derived from alignment at tig00000102_pilon:122519..127041- (Gracilaria gracilis GNS1m male)
ATGTGTATGGAGACGTCAGTTCATGAGGAAGGGAACAGCAGCACAGCCCC
GTTTTCCACCGCTTCATTCAACGTTCGACCCCCTCGTATAACGAAAAAGA
AAGATACAGTCGAGCAGTCGGCGGCTCCCAATCGAATTAAGGCTATCAAG
TTTGGAATCGCTTCTGCGGAGGAGATTGCATCCAATGCTCACCTCGTTGT
CAATAACCGTGAGATTTATGAACAGCGCGACCGTTCCCAAATTCGAGGTG
GGGCCCTTGATCCACGGTTAGGAGCAATCGACAAGAATGCTGTTTGTGAA
ACATGTAACCAAAAGCAAGAGCATTGTATAGGCCATTTTGGCTACGTAAG
GCTTGTGTTGCCGGTTTTTCATGCTGGTTACTTCAAAGCAACACTGAAGA
TATTGCAAATGATATGCAAGTTTTGTTCTCGCGTTATGCTGAGTGAGGAC
ATTCGACAACGGTATTTACAGAGACTTGCGAGAAGCAAAGTGAAGACATC
ATTACATCATGAGATCTGGGAAAAAGCGAAGAGAGTGAAGGACTGTCTGT
ACTGCGGGAGAAGGAATGGGGTCGTCAAAAAAACTTCCGTGTTAAGGATC
ATGCATTATCCGCTTGATAACAAGCCGCCTTCAAAGAAGAAAGAAGAGGA
TGATGAAGATGAGAGCGATGAAACAGAGGAGAATTCGCCTGTTTTTGACC
CAGTTTTTGAGATGGCAGCCTCTCAGAACCCGGACCTGAAAAAGCATTTG
CCCAAAAGTGCAGACAGTCTCAACCCCATGCGTGTGCTGAACTTGTTCAA
GAACATTACAGCAGAGGACGTAAAGCTTCTTGACATGAACCCTGAGTTTG
GAAGACCGGAGCGTCTTTTGGTGCAATACCTTCCAGTACCACCTCTATGT
ATTCGACCTTCAGTTTGCTCAGACCCGGCTGCGGGATCAAATGAGGATGA
TTTGACGATGAAGGCAGCCGAAATAGTGCATATGAACACTGTCATAACTC
AACTGCTAGAAAAAGGAGGTACTCCGTCCAACATATATGAAAGCTGGGAT
CATCTGCAGTATGAAGTCGCACGGTACATAAACTCAGAGCAACCAGGGTT
ACCGCTACAGCAAGGGGTAGGAAAGTCTTTACGAGGGGTCAGTCAACGCT
TGAAGGGGAAAACAGGACGTTTCCGTGGTAATCTTTCTGGAAAGCGTGTT
GACTTTTCGGGCAGAACTGTTATTTCACCGGACCCTAATCTTTGTATCGA
CCAAGTTGGCGTTCCGATTCATGTAGCAAAGATATTAACTTTCCCCGAAC
GAGCGACCATGTTCAACATGGAAATGCTTCGAAACCTAATACGGAATGGA
ATGCAGCAGTATCCGGGTGCGAACCATGTCGAATTTCCGGATGGAACGAG
AAAGTTTCTCAAGTATGGTAATCGTGAAAAACTTGCACGGGAATTGGTCC
CGGGAACAATTGTTGAACGCCATCTGCTGGACGGGGATATTGTATTGTTT
AATCGACAACCTAGTCTTCATCGTATTTCGATCATGGCTCACAAAGTCAA
GATATCACCTCATCGAACGTTTCGCTTCAATGAATGCGTGTGTGCCCCAT
ACAATGCTGATTTCGATGGAGATGAAATGAATCTTCACGTTCCTCAAACT
CAGGAAGCCCGGACGGAAGCCTTGGAGCTGATGGGAGTGGTACGAAACAT
ATGTACTCCTAAAAGTGGAGAACCCCTTGTAGCTGCAACGCAAGATTTCA
TTACGGCTTCGTATTTGATTACAAGTAAGAACATGTTCATGGATAGGTCC
GAGTTTTCAAGAGTGGCAGCTATGGTTTCCAATGCTGAATTTACTATCCC
TCTCCCACCTCCTGCAATTTTGAAACCAGTAGAGATGTGGACAGGCAAGC
AGCTATATTCTGCTTTGATCCAGAGTGCGGCACGGTCTGCCGGGGCCCGC
TCTCATGTTGTATACAATCCGAACGAAAGATTTCGTGACACGGGGGTGCT
GAAGCCGAGTATGGCGTATGTGACAACAGAAGTAGCAGAAAAAGGCCACA
AGAAAGATCTCATCCCTCCAGGAGAATTCCCGGGTATGTGTCCGAGAGAC
ACATACGTTTATTTCCGAGGAGGAGAACTCATGTGCGGACAACTGGGAAA
GAAATCGCTAGGAGATGGTTCGAAGAAATCCGTTCTATACATTCTTGCAA
GGGAATGTGGCAACGAATCAGCAGCGTATGCCATGAATCGTATCGCTCGT
TTTGGAGCAAGATGGCTTGCAGATGGAGCATTCTCTATTGGAGTAGATGA
CGTCATGCCGTCAACATCGTTGAGAGAAGCAAAGGCGAGCTACATCAGAG
AGAGTGACCAAAGGTGCAAAGAAATCATGCTTGCATACGACCATGGGGAA
CTTGAATTACAACCGGGATGCACAGCTCGTGAAACTCTAGAAGCAATGCT
AATGAAAGAGTTACACGGTTTGCGGCGAAAAACGGCGGATGCGTGTAAAG
CAGGTCTTGATGTTCATACAAACGCTGGACTCACTATGGCCTTAGCTGGT
TCGAAAGGTTCAGACCTTAACATTGCCCAGATGATCGCTTGTGTAGGACA
GCAAGTAATCGGAGGAAAACGTGCTCCTGATGGTTTCTTTGGCAGATGTC
TCCCACATTTTGAGCTTGGTCTCGGGGCACTTGCTCCACTGGCGAAAGGG
TTTGTTGCAAACAGTTTCTTTAGCGGCTTGACGGGAACAGAATTTTTCAT
GCACGCACAGAGCGGTCGAGAAGGGCTTACTGATACAGCTGTCAAAACAG
CAGAAACGGGGTACATGCAGAGGCGTTTAGTAAAAGCTCTGGAAGATCTG
AGTGTTCAATATGATTCAACTGTTCGTTCTAGTGATGGTTCAGTTGTTCA
AATGTCTTATGGAGATGATGGACTTGATCCACTGCAAATGGAAACGGATA
TTGGGAAGCCTGTCAACTTCGACAGAACGTTGGATGCCGTGACATGTGCC
CTCAAAGATGAAGAAGACCCTGTTCTCAGTCCTTTTGAACTGGGATTCCA
GGGTGAGGAGCTTGTAAATGATCTAAGAGAGGACTTGTTAGATGCCAAGC
TCGTACCGGATGGGGATCAAGAAGAGAACAAAGGGGGCTTGGATCATTGT
CTAACTGAAGTCGGGGAGTATTTGAAGAAGGTCAGCGATGTCGGTAAGTT
CAAATTAAGAAGGTCTCAGGTTAAGGAATTTCTGCGCCAAGTTCAAGCTA
AGACTCGTAGGGCGGCTATCGAACCAGGCACAGCGGTCGGTGCCATAGGT
GCTCAGAGTATTGGGGAACCTGGAACGCAAATGACATTGAAGACGTTCCA
TTTTGCAGGGACAACAACTATGAGCATCACTCAGGGTGTTCCAAGATTGA
AGGAAATCATCAATGCAAGCAAAACGATATCGACTCCCGTTACAGTTGCA
CCACTTGTCTGGAGTACAGACGTGAAGTCTGCACGCATTGTGAAGGGGCG
AGTGGAGAGCACAACGTTGGGGGGAGTGGTGAAGCACATCAAGGAAGTCT
ATCGGGGTCCATACGCTTACATTTCTATTCAGCTAGATATGAAAACAATT
CACACTCTGCAGTTGGATATTAGCATTGAATCTGTGGCGGAAAGGATTAT
ACGTCACTCGTTTTCCAAAGTGCGAGTAACGCGAGAAGACGTTATTATAC
TGCGGCCCGACAAATTGAGGATTAACCCCTTCGTGAAAGAGACAAGTTTT
GGAGAAATAAGTATTCAGAATAGGACGAAGGAAGGACGAAGAAAAAGCAT
GGAAACTCATCCATACCACCTTTTGCAATCATTGAAACTACAATTACCGC
ATGTGTCTGTATGTGGTATCAGTTCTGTGTCTAGAGCCGTGATCAGTGAC
TGCAGTACTGGAGGTTCTCCGGAGTATCAATTAGAAATCCCATCGGAGAA
CATCGCAGATATTATGGTTACACCTGGTGTGGATGGCACGAAGGTTTCAT
GTAATCACATCATGGCAATGGAGAAGACATTAGGGATTGAGGGAGCGAGG
CATTCCATACTACATGAGATGCAAACTACACTCGGGGCGCACGGGCTCAC
TGTGGACAGCCATCATCTCAAGCTTCTAGCAGATTGTATGACCTCAAGCG
GCACGGTTTTGGGTATTACCCGTTTCGGTATTCAGAAGATGAGAACGTCA
ACACTGATGTTGGCGAGTTTCGAGATGACTGTTGAACACTTGTTCCATGC
AGCCATCCACTCAAAGGAGGATCAGATATCAGGGGTGTCAGAGAGAATAA
TCATGGGCGTACCAATACCACTCGGCACTGGTCTCTTCCAATTGTTCAGG
CAATCTGCAGAGAAGAACACTAGCGCTGTGTTTCAGCGAAGAGATATTCT
TCTTGATTCCTACCCTTCGTTTGGAGTGTAA
back to top