Ggra744.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra744.t2
Unique Name	Ggra744.t2
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	525

Homology

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BLAST of Ggra744.t2 vs. uniprot
Match: A0A2V3IIQ4 (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ4_9FLOR)

HSP 1 Score: 603 bits (1556), Expect = 5.220e-209
Identity = 362/538 (67.29%), Postives = 403/538 (74.91%), Query Frame = 0

Query:    1 MSPVPSDHSALPKQWAHEMALASSTLSSSQS-----PPRSPPHTLGGPAFDSQLDAFLHRFQHQILAARALKDDLDRLESHQHPH--YVAKKVAFKRHMEHIRSLFSTEGEQFVDSLERRNPNLTMAACGQNTIELAQGIERLESAVKEXXXXXXXXXXXXXXXXXXXXXXXXXXN---SLQP--HLAAITPLSSPDR------TAPPVSAVGHPLNNLSSEETLQLMQSDIQALKLELMRLHRVKVSAASASLPPPYAPGSVSPHADTPAFTSSTVSPDAKSVNAPPIPASILANNNVSVVRVTGRSIAPNYVSHLEQMKTRLQALEKKPLSRRAKSAARLGRTQTMSSMYEARAGDENQNPNVSAMVTPPRGVRR-QHRSVSTTSPVAASKTLLTPPPLQQLRSECSPRTTPSPVRLARERASGSPARLYFDAPEDLLSRPQSHAAARDIQRYSLKVSRRFGPNEMEMPAEPRAKSAVTVSPNRRRGAMQEGGKSVGNALTEVAAPLGAPSTIDTTGSGGRVVEEIEGDMWVRKAM 519
            M+ +P    ALP+QWA EMALA+S  S   S     P  +P  TLGGP FD+QLD FL RFQ +I+ ARALKDDLD+L +       Y +KK  FK  M HIRSLFSTEGEQFV SLERRNP LTMAACG+NTIELAQGIERLE+AVKE               XXXXXXX        S Q    +  ITPLSSPDR      T  P SAVGH LNNL+S+ETLQLMQSDIQALKLELMRL R K  A SA LPPPY P S++  +D  +FT STVS + KS  APPIPASILANNNVSVVRVTGRS APNYVSHLEQMK+RL+ALEKKPLSRR KSAARLGRTQTM SMYE  + DEN NPNVSAMVTPPR  RR +HRSVS+ SP+A +K ++TPPP +  R E S  +TPSPVR   +++S SPARLYFDAPEDLL+RPQSHAAARDIQRYSLKVSRR GP E  + AEPRAKSAVTVSPNRRRG MQEGG SVGNA+++    LG PSTIDTTGSGGRVVEEIEGDMWVRK +
Sbjct:    1 MATLPRHKPALPQQWADEMALATSATSPLPSNLPPPPATTPAETLGGPLFDTQLDGFLDRFQQEIVVARALKDDLDQLTNRDDTDAVYHSKKQLFKLKMHHIRSLFSTEGEQFVKSLERRNPKLTMAACGENTIELAQGIERLETAVKEEETKRTASKPTATNAXXXXXXXPSAPRAPLSFQKASDITVITPLSSPDRETSTVVTPHPPSAVGHTLNNLNSDETLQLMQSDIQALKLELMRLQRTKAHATSA-LPPPYVPKSMTSPSDNQSFTLSTVSAEVKST-APPIPASILANNNVSVVRVTGRSTAPNYVSHLEQMKSRLEALEKKPLSRRTKSAARLGRTQTMGSMYEPVSADENHNPNVSAMVTPPRASRRMKHRSVSSASPLA-NKAVVTPPPTEHFRIERSSHSTPSPVRPGADKSSTSPARLYFDAPEDLLTRPQSHAAARDIQRYSLKVSRRLGPAEPVLIAEPRAKSAVTVSPNRRRGVMQEGGMSVGNAVSDAGGALGPPSTIDTTGSGGRVVEEIEGDMWVRKGV 535

The following BLAST results are available for this feature:

BLAST of Ggra744.t2 vs. uniprot

BLAST of Ggra744.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IIQ4	5.220e-209	67.29	PH domain-containing protein n=1 Tax=Gracilariopsi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..404

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000164_pilon	contig	tig00000164_pilon:51008..52664 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra744.t2	Ggra744.t2	Gracilaria gracilis GNS1m male	mRNA	tig00000164_pilon 51008..52664 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra744.t2 ID=Ggra744.t2|Name=Ggra744.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=525bp
MSPVPSDHSALPKQWAHEMALASSTLSSSQSPPRSPPHTLGGPAFDSQLD
AFLHRFQHQILAARALKDDLDRLESHQHPHYVAKKVAFKRHMEHIRSLFS
TEGEQFVDSLERRNPNLTMAACGQNTIELAQGIERLESAVKEEETKRAAA
ASHPPSSSTLPPPPPPPPNSLQPHLAAITPLSSPDRTAPPVSAVGHPLNN
LSSEETLQLMQSDIQALKLELMRLHRVKVSAASASLPPPYAPGSVSPHAD
TPAFTSSTVSPDAKSVNAPPIPASILANNNVSVVRVTGRSIAPNYVSHLE
QMKTRLQALEKKPLSRRAKSAARLGRTQTMSSMYEARAGDENQNPNVSAM
VTPPRGVRRQHRSVSTTSPVAASKTLLTPPPLQQLRSECSPRTTPSPVRL
ARERASGSPARLYFDAPEDLLSRPQSHAAARDIQRYSLKVSRRFGPNEME
MPAEPRAKSAVTVSPNRRRGAMQEGGKSVGNALTEVAAPLGAPSTIDTTG
SGGRVVEEIEGDMWVRKAMTLVEG*