Ggra7430.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7430.t1
Unique NameGgra7430.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Homology
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BLAST of Ggra7430.t1 vs. uniprot
Match: A0A2V3IHA1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHA1_9FLOR)

HSP 1 Score: 179 bits (455), Expect = 1.920e-53
Identity = 86/157 (54.78%), Postives = 111/157 (70.70%), Query Frame = 0 
Query:   18 GTVVEISVDRGRTWTGFSKPLENPPLSALLRVRGGSPIVTIPSCAMEGSLLIQVWKDAVSDRPLGMRWKSNLCHPTASLDKDGVVIETIVPKRRRPDWNPYVREVKEQEQEQEHDETLKPERKGWWSRYSLYIMLFFVVALGQGIRKGLAEQRVEME 174
            GT VE+SVD GRTW  +S+P+   P  A +RV GGSP + +PSCA++G+L IQVW D+ S  P+GMRW S  C+P+ S D DG+V+E I    R+P+W  Y  E KE E+E + +E    E K +W RY LYIMLFFVVAL QGIR+GLAEQR+E+E
Sbjct:   29 GTQVEVSVDSGRTWIPYSEPVLEAPAFAHMRVSGGSPFIRVPSCALKGALFIQVWTDSPSANPIGMRWSSKFCNPSLSQDTDGIVVERIRAHARKPEWLSYTFEKKEHEEELKTEEK---EEKSFWRRYGLYIMLFFVVALAQGIRQGLAEQRMEIE 182
The following BLAST results are available for this feature:
BLAST of Ggra7430.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHA11.920e-5354.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:1108791..1109426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7430.t1Ggra7430.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 1108791..1109426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7430.t1 ID=Ggra7430.t1|Name=Ggra7430.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
MKLYLLGILVLCFKRVVGTVVEISVDRGRTWTGFSKPLENPPLSALLRVR
GGSPIVTIPSCAMEGSLLIQVWKDAVSDRPLGMRWKSNLCHPTASLDKDG
VVIETIVPKRRRPDWNPYVREVKEQEQEQEHDETLKPERKGWWSRYSLYI
MLFFVVALGQGIRKGLAEQRVEMEREEEERKRGNGNGVGQVRISVPKRKE
SKARKRSTASS*
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