Ggra7430.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7430.t1
Unique NameGgra7430.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:1108791..1109426 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7430Ggra7430Gracilaria gracilis GNS1m malegenetig00000871_pilon 1108791..1109426 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7430.t1.stop1Ggra7430.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000871_pilon 1108791..1108793 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7430.t1.CDS1Ggra7430.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000871_pilon 1108791..1109426 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7430.t1.exon1Ggra7430.t1.exon1Gracilaria gracilis GNS1m maleexontig00000871_pilon 1108791..1109426 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7430.t1.start1Ggra7430.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000871_pilon 1109424..1109426 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7430.t1Ggra7430.t1Gracilaria gracilis GNS1m malepolypeptidetig00000871_pilon 1108791..1109426 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7430.t1 ID=Ggra7430.t1|Name=Ggra7430.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=212bp
MKLYLLGILVLCFKRVVGTVVEISVDRGRTWTGFSKPLENPPLSALLRVR
GGSPIVTIPSCAMEGSLLIQVWKDAVSDRPLGMRWKSNLCHPTASLDKDG
VVIETIVPKRRRPDWNPYVREVKEQEQEQEHDETLKPERKGWWSRYSLYI
MLFFVVALGQGIRKGLAEQRVEMEREEEERKRGNGNGVGQVRISVPKRKE
SKARKRSTASS*
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spliced messenger RNA

>Ggra7430.t1 ID=Ggra7430.t1|Name=Ggra7430.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=636bp|location=Sequence derived from alignment at tig00000871_pilon:1108791..1109426- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCTATATCTCTTAGGGATCCTGGTTCTCTGTTTTAAGAGAGTTGT
GGGGACTGTTGTGGAAATCTCAGTGGACCGCGGAAGGACATGGACGGGTT
TTTCGAAGCCTCTCGAAAATCCCCCGTTGTCCGCTCTACTAAGGGTTCGT
GGAGGATCCCCTATTGTCACAATTCCGTCCTGTGCTATGGAAGGATCCCT
TCTCATTCAAGTATGGAAGGATGCAGTTAGTGACAGACCTTTAGGTATGC
GGTGGAAATCAAATCTGTGCCACCCAACAGCTTCCTTGGACAAAGATGGA
GTGGTTATCGAAACCATAGTCCCAAAGAGACGGAGACCAGACTGGAATCC
ATATGTACGTGAGGTAAAAGAGCAGGAGCAGGAGCAGGAGCACGATGAGA
CTCTAAAACCTGAACGAAAAGGTTGGTGGAGTCGGTATAGCTTGTACATA
ATGTTATTCTTTGTTGTGGCATTAGGTCAAGGTATTCGGAAAGGTCTTGC
AGAGCAACGGGTGGAGATGGAACGTGAAGAAGAGGAGAGAAAAAGGGGGA
ACGGTAACGGCGTTGGTCAGGTGCGTATTTCAGTACCAAAACGCAAGGAG
TCAAAGGCTCGGAAGCGGTCAACTGCTTCATCATAG
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protein sequence of Ggra7430.t1

>Ggra7430.t1 ID=Ggra7430.t1|Name=Ggra7430.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
MKLYLLGILVLCFKRVVGTVVEISVDRGRTWTGFSKPLENPPLSALLRVR
GGSPIVTIPSCAMEGSLLIQVWKDAVSDRPLGMRWKSNLCHPTASLDKDG
VVIETIVPKRRRPDWNPYVREVKEQEQEQEHDETLKPERKGWWSRYSLYI
MLFFVVALGQGIRKGLAEQRVEMEREEEERKRGNGNGVGQVRISVPKRKE
SKARKRSTASS*
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mRNA from alignment at tig00000871_pilon:1108791..1109426-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7430.t1 ID=Ggra7430.t1|Name=Ggra7430.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=636bp|location=Sequence derived from alignment at tig00000871_pilon:1108791..1109426- (Gracilaria gracilis GNS1m male)
ATGAAGCTATATCTCTTAGGGATCCTGGTTCTCTGTTTTAAGAGAGTTGT
GGGGACTGTTGTGGAAATCTCAGTGGACCGCGGAAGGACATGGACGGGTT
TTTCGAAGCCTCTCGAAAATCCCCCGTTGTCCGCTCTACTAAGGGTTCGT
GGAGGATCCCCTATTGTCACAATTCCGTCCTGTGCTATGGAAGGATCCCT
TCTCATTCAAGTATGGAAGGATGCAGTTAGTGACAGACCTTTAGGTATGC
GGTGGAAATCAAATCTGTGCCACCCAACAGCTTCCTTGGACAAAGATGGA
GTGGTTATCGAAACCATAGTCCCAAAGAGACGGAGACCAGACTGGAATCC
ATATGTACGTGAGGTAAAAGAGCAGGAGCAGGAGCAGGAGCACGATGAGA
CTCTAAAACCTGAACGAAAAGGTTGGTGGAGTCGGTATAGCTTGTACATA
ATGTTATTCTTTGTTGTGGCATTAGGTCAAGGTATTCGGAAAGGTCTTGC
AGAGCAACGGGTGGAGATGGAACGTGAAGAAGAGGAGAGAAAAAGGGGGA
ACGGTAACGGCGTTGGTCAGGTGCGTATTTCAGTACCAAAACGCAAGGAG
TCAAAGGCTCGGAAGCGGTCAACTGCTTCATCATAG
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Coding sequence (CDS) from alignment at tig00000871_pilon:1108791..1109426-

>Ggra7430.t1 ID=Ggra7430.t1|Name=Ggra7430.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=636bp|location=Sequence derived from alignment at tig00000871_pilon:1108791..1109426- (Gracilaria gracilis GNS1m male)
ATGAAGCTATATCTCTTAGGGATCCTGGTTCTCTGTTTTAAGAGAGTTGT
GGGGACTGTTGTGGAAATCTCAGTGGACCGCGGAAGGACATGGACGGGTT
TTTCGAAGCCTCTCGAAAATCCCCCGTTGTCCGCTCTACTAAGGGTTCGT
GGAGGATCCCCTATTGTCACAATTCCGTCCTGTGCTATGGAAGGATCCCT
TCTCATTCAAGTATGGAAGGATGCAGTTAGTGACAGACCTTTAGGTATGC
GGTGGAAATCAAATCTGTGCCACCCAACAGCTTCCTTGGACAAAGATGGA
GTGGTTATCGAAACCATAGTCCCAAAGAGACGGAGACCAGACTGGAATCC
ATATGTACGTGAGGTAAAAGAGCAGGAGCAGGAGCAGGAGCACGATGAGA
CTCTAAAACCTGAACGAAAAGGTTGGTGGAGTCGGTATAGCTTGTACATA
ATGTTATTCTTTGTTGTGGCATTAGGTCAAGGTATTCGGAAAGGTCTTGC
AGAGCAACGGGTGGAGATGGAACGTGAAGAAGAGGAGAGAAAAAGGGGGA
ACGGTAACGGCGTTGGTCAGGTGCGTATTTCAGTACCAAAACGCAAGGAG
TCAAAGGCTCGGAAGCGGTCAACTGCTTCATCATAG
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