Ggra7422.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7422.t2
Unique NameGgra7422.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length580
Homology
BLAST of Ggra7422.t2 vs. uniprot
Match: A0A2V3IHB1 ((R)-citramalate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHB1_9FLOR)

HSP 1 Score: 978 bits (2529), Expect = 0.000e+0
Identity = 479/580 (82.59%), Postives = 533/580 (91.90%), Query Frame = 0
Query:    1 MVAPARRKSEQVTPL-TEQNSSTLVKQQKTVYVYDTTLRDGSQGEGISFTVPDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRDLQNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPTVKIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGEQLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNAAPRNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQCIL 579
            MVAP RR + +++ L    N   L KQ+KTV +YDTTLRDGSQGEGIS TVPDK+K+A  LD+FG HYIEGGWPGSNPKDE+FFAQC+ L NAKLVAFGSTRYKGTTCE DKNV AL+ ADTPVVTLVGKAW+ QV+VVLEA+L+ENLAMIS+TV +FK +GREVMLDAEHF+DGYKA  +YALSCL++AV+AGVDVLVLCDTNGGTLPWEI++IT+VVV++FPTV+IGIHCHNDMELAVSN+IAAVHAGA+LVQGTINGFGERTGNANLMSIVPTLQLKMG++CVG++L QLT +SRY DEI NQPHVP+RPYVG+SSFAHKGGLHVAAVLKD NTYQHI+P +VGNERRILVSELSGRRNI+TKA+ELGLHP  + ++  EWN+R K+VL QVKELENKGYSFEGAEASLELMLRRT+ GYRPPFELLDFSVSTDNKRVVYGN  NA P NESVTQASVKLALLGP+DGGD CPTK+CFEIAEGNGPVDAVNGALQKCLLPVY PLR+VSLVDY+VRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQCI+
Sbjct:    1 MVAPVRRPNPRLSNLEAPDNPGELRKQKKTVQIYDTTLRDGSQGEGISLTVPDKLKLAQRLDEFGAHYIEGGWPGSNPKDESFFAQCKGLDNAKLVAFGSTRYKGTTCEHDKNVQALMKADTPVVTLVGKAWDHQVSVVLEATLDENLAMISDTVAFFKRKGREVMLDAEHFYDGYKASPAYALSCLHAAVKAGVDVLVLCDTNGGTLPWEIDEITRVVVAEFPTVRIGIHCHNDMELAVSNTIAAVHAGATLVQGTINGFGERTGNANLMSIVPTLQLKMGHDCVGDRLQQLTDLSRYTDEITNQPHVPNRPYVGASSFAHKGGLHVAAVLKDENTYQHIDPVLVGNERRILVSELSGRRNILTKAEELGLHPADESKDGVEWNVRVKAVLEQVKELENKGYSFEGAEASLELMLRRTVHGYRPPFELLDFSVSTDNKRVVYGNVLNATPNNESVTQASVKLALLGPEDGGDQCPTKICFEIAEGNGPVDAVNGALQKCLLPVYAPLRSVSLVDYKVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQCII 580          
BLAST of Ggra7422.t2 vs. uniprot
Match: R7QGZ5 ((R)-citramalate synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGZ5_CHOCR)

HSP 1 Score: 833 bits (2152), Expect = 5.050e-300
Identity = 402/552 (72.83%), Postives = 476/552 (86.23%), Query Frame = 0
Query:   30 VYVYDTTLRDGSQGEGISFTVPDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRD-LQNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPTVKIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGEQLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVK-EWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNAAPRNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQCIL 579
            + VYDTTLRDG+QGEGIS +V DK+KIA  LD+FG HYIEGGWPGSNPKD AFF  CR  L+ AKLVAFGSTRYK TTCEKD+NV  L NADT VVTLVGKAW+ QV VVLEASLEENL MI E+V YFK  GREVMLDAEHF+DGYKA   YA++CL +AV  GVDVLVLCDTNGG++PW+++ +T  VV +FP  ++G+HCHNDMELAV+NSI+AV+AGASLVQGT+NG+GERTGNANLMSIVPTLQLK+GY CVG+ LS+LT +SR+ DEIA Q  V  +P+VG SSFAHKGGLHVAAVLK+ +TYQHI+P +VGNE+RILVSEL+GRRN+++KA+ELGL P GD+   + EW  RAK VL QVK+LENKGYSFEGAEASLELMLRR++EGYRPPFELLDFSV+TDNKR+ YG ++   P NESVTQA+VK+ALLGPKDGG+ CPTK+C E+AEGNGP+DAVNGAL K L  +Y+PL+TV+L DY+VRILD+ S TAA TRV+V+FE+S++G++WTTVYAHPNIIVASVNALMDGFEVAMWD LPQC +
Sbjct:    8 IQVYDTTLRDGAQGEGISLSVADKLKIATRLDEFGAHYIEGGWPGSNPKDAAFFENCRGKLKRAKLVAFGSTRYKNTTCEKDRNVQMLANADTLVVTLVGKAWDMQVQVVLEASLEENLDMIRESVAYFKRLGREVMLDAEHFYDGYKAAPEYAIACLQAAVDGGVDVLVLCDTNGGSVPWDLQKVTATVVHRFPATRVGVHCHNDMELAVANSISAVNAGASLVQGTVNGYGERTGNANLMSIVPTLQLKLGYACVGDALSKLTSLSRFVDEIACQKPVSGQPFVGVSSFAHKGGLHVAAVLKNEDTYQHIDPSLVGNEKRILVSELAGRRNVLSKAEELGLVPAGDDAGARQEWGNRAKQVLGQVKDLENKGYSFEGAEASLELMLRRSVEGYRPPFELLDFSVTTDNKRIHYGPNSEGPPFNESVTQATVKIALLGPKDGGEACPTKICLEVAEGNGPIDAVNGALGKVLFSMYQPLQTVALTDYKVRILDSESATAATTRVVVDFEDSASGRQWTTVYAHPNIIVASVNALMDGFEVAMWDSLPQCCI 559          
BLAST of Ggra7422.t2 vs. uniprot
Match: M2Y7B2 ((R)-citramalate synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7B2_GALSU)

HSP 1 Score: 671 bits (1730), Expect = 1.620e-234
Identity = 342/563 (60.75%), Postives = 421/563 (74.78%), Query Frame = 0
Query:   32 VYDTTLRDGSQGEGISFTVPDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRD---LQNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPTV-KIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGEQLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVY--GNDTNAAP---------RNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQCIL 579
            +YDTTLRDG+QGE ISFTV DK++IA  LD+FGV YIEGGWPGSNPKD  FF + +    L  AKLVAFGSTR KG  C+ D N+  L+ A+T VVT+V K+W +QV  VL  SLEENLAMI E+V + K   +EVM+DAEHFFDGY  ++SYAL+CL++A++ G DVLVLCDTNGG LPW I + T  V S F +  +IGIHCHNDMELAVSNS++AV+AGASLVQGT+NG+GERTGNANL+SI+PTLQLKM YN VG +L  LT++SR+ DE+ N PH PSRPYVG  +FAHKGGLHV+A+LKD  +YQHI+P +VGN +R+L+SELSGR NI+ K K++G+  D   ++  EW  R + +L QVK LENKGY+FEGAEAS+ELM+RR+L  YR PFELLDF+V T NKRV Y  G   N            RNES+TQA VKL +L   +G        CFE AEGNGP++AVN AL+K L+ V+ PL  V+L DY+VRILDN S TAA+TRVMVEF ++     W+TV AH NIIVASV ALMDGFE A+  +LP C +
Sbjct:   75 IYDTTLRDGAQGENISFTVIDKLRIAKALDEFGVQYIEGGWPGSNPKDVEFFKRAKQELHLCRAKLVAFGSTRRKGIRCQDDVNLRLLIEAETSVVTIVAKSWKEQVINVLNVSLEENLAMIEESVRFLKEHDKEVMVDAEHFFDGYSHNASYALACLDAAIRGGADVLVLCDTNGGCLPWHIYETTSSVASHFGSQQRIGIHCHNDMELAVSNSLSAVYAGASLVQGTMNGYGERTGNANLISIIPTLQLKMNYNVVGSKLISLTELSRWMDEVTNVPHQPSRPYVGDCAFAHKGGLHVSAILKDERSYQHIDPSLVGNRKRMLISELSGRGNIVDKMKQMGIVTDSQLQDP-EWKRRIQGILEQVKSLENKGYTFEGAEASIELMIRRSLNNYRSPFELLDFTVLTGNKRVYYAVGESNNILTHGVYSSETFRNESITQAIVKLGILETSNGACPIERTRCFEAAEGNGPLNAVNLALKKALVRVHAPLEHVNLQDYKVRILDNESATAAVTRVMVEFYDAETKCVWSTVCAHSNIIVASVQALMDGFEYALLQRLPACFI 636          
BLAST of Ggra7422.t2 vs. uniprot
Match: A0A7S1ES51 ((R)-citramalate synthase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ES51_9RHOD)

HSP 1 Score: 654 bits (1687), Expect = 8.080e-228
Identity = 337/570 (59.12%), Postives = 427/570 (74.91%), Query Frame = 0
Query:   30 VYVYDTTLRDGSQGEGISFTVPDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRD--LQNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPT--VKIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGE--QLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKS----VLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNAAPR-----------NESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQCI 578
            V +YDTTLRDGSQGEGISF+V DKI+I   LD+FGV YIEGGWPGSNPKD AFF   R+  L++++L AFGSTRYK +TCE D N+ ALL+A+T VVTLVGKA   QVT VL A+L+ENLAMI+++V Y   RGREVMLDAEHFFDG++AD SYA+ CLN+A  AG   LVLCDTNGG+LPW+IE+IT+ VV +F +  ++IGIHCHNDMELAV+NSI+AVHAGA++VQGT+NG+GERTGNANL+SI+P+L LKM   C+ E  QL  LT +SRY DE+ANQPHV SRP+VGSS+FAHKGGLHVAAV+K+ ++YQHI+P +VGN RR+LVSELSGR NI++K  ELG+  +    + KE +   K+    +L +VK+LEN GY+FEGAE S+ELM+RR +  Y  PFEL+DF+V T ++      D  A+             + SV+QA V+L L+        C  K   E+ EGNGPVDA+N A++K LL  Y  L+++ L DY+VRILDN S TAA TRVM+ F +  + + WTTV AHPNIIVAS+NAL+DGFE AM  + P C+
Sbjct:   92 VSIYDTTLRDGSQGEGISFSVEDKIRIMKRLDEFGVDYIEGGWPGSNPKDAAFFDAARNITLRHSRLAAFGSTRYKKSTCENDANIQALLHAETSVVTLVGKASAFQVTDVLGATLDENLAMIADSVKYLVDRGREVMLDAEHFFDGFRADKSYAMKCLNAAADAGASSLVLCDTNGGSLPWQIEEITRSVVEEFRSRGIRIGIHCHNDMELAVANSISAVHAGATVVQGTVNGYGERTGNANLVSIIPSLHLKMKAECLAEADQLKMLTSLSRYVDELANQPHVGSRPFVGSSAFAHKGGLHVAAVMKNEDSYQHIDPTVVGNVRRVLVSELSGRGNIVSKMNELGIELNVSNSSGKEASTDIKTQSGQILERVKQLENCGYTFEGAEGSVELMIRRAMSSYSSPFELVDFNVVTGSRYASSELDPGASHGAGSASANIPFGDSSVSQAVVRLNLITTDSDSTACVIKQRLEVGEGNGPVDALNSAMRKALLLEYPSLKSMILTDYKVRILDNESATAATTRVMISFADKESKESWTTVSAHPNIIVASINALVDGFEYAMLSRQPTCL 661          
BLAST of Ggra7422.t2 vs. uniprot
Match: A0A7S0G5Y8 ((R)-citramalate synthase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5Y8_9RHOD)

HSP 1 Score: 651 bits (1679), Expect = 2.780e-227
Identity = 328/544 (60.29%), Postives = 418/544 (76.84%), Query Frame = 0
Query:   30 VYVYDTTLRDGSQGEGISFTVPDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRD--LQNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPTVKIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGEQ-LSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNAAPRNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAM 570
            V +YDTTLRDGSQGEGIS TV DK++IA  LD FGV YIEGGWPGSNPKD  FF   +D  L++AKL AFGSTRYK   C +D N+ AL+ A TPVVT+VGKAW+ QV VVLEASLEENLAMISE+V Y K RG+EVMLDAEHFFDGY A+ +YA+ CL++A  AG DV+VLCDTNGG+ PWE   IT  V  +    ++GIH HNDMELAV+NS+AAV +GA++VQGT NG+GERTGNANLMSI+P LQLK+GY C+ +  L  LT++SR+ DE AN+PHV SRP+VGSS+FAHKGGLHVAAV+K+ NTYQHI+P  VGN++R+LVSELSGR NI+ KA++LGL   G+  +   W  R+K++L ++KELEN GY+FEGAEAS+ELM+RR+L GY  PFEL+DF+V + NK+ +   D      ++S +QA+VK+ ++      D CP    FE +EGNGPV+A+N A+ K L  V+  ++ ++L+DY+VRILDN   + A TRVM+EF +    ++W++V AHPNIIVASVNALMDG+E  M
Sbjct:   68 VDIYDTTLRDGSQGEGISLTVEDKLRIAQKLDDFGVSYIEGGWPGSNPKDAEFFTAMKDIKLKSAKLCAFGSTRYKHVACGEDANIRALIEAQTPVVTIVGKAWDMQVEVVLEASLEENLAMISESVTYLKKRGKEVMLDAEHFFDGYLANPAYAMQCLDAAADAGADVVVLCDTNGGSSPWETGQITFEVARRV-ACRVGIHAHNDMELAVANSLAAVRSGATVVQGTANGYGERTGNANLMSIMPALQLKLGYKCLSKNSLGGLTELSRFIDEQANRPHVTSRPFVGSSAFAHKGGLHVAAVMKNENTYQHIDPKAVGNQKRVLVSELSGRGNIVQKAQDLGLLKSGEVVD-DAWKRRSKTILQRIKELENLGYTFEGAEASVELMIRRSLPGYEAPFELVDFTVVSGNKKEMDARDLIPFSESQS-SQATVKMRVVTECKDDDGCPFVETFEGSEGNGPVNALNKAMMKALTSVFPSVQALTLIDYKVRILDNDRASEATTRVMIEFMDDELRRKWSSVSAHPNIIVASVNALMDGYEYGM 608          
BLAST of Ggra7422.t2 vs. uniprot
Match: A0A5J4YVN8 ((R)-citramalate synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVN8_PORPP)

HSP 1 Score: 649 bits (1673), Expect = 1.070e-225
Identity = 336/567 (59.26%), Postives = 418/567 (73.72%), Query Frame = 0
Query:   30 VYVYDTTLRDGSQGEGISFTVPDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRD--LQNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPTV---------KIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGE--QLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNA---APRNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQL-PQCIL 579
            V +YDTTLRDGSQGEGISF+V DK++I   LD  GV +IEGGWPGSNPKD AFF   +   L+NAKL AFGSTRYK   CE+D N+ ALL A TPVVT+VGKA  KQV +VL AS EENLAMISE+V Y    GR VM DAEHFFDGY+AD  YAL C  +A +AG  V+VLCDTNGG+ PW+IE IT  V  +   +         K+GIHCHNDMELAV+NS+AAV  GASLVQGT NG GERTGNANLMSI+P L LKMG +C+ +  +LSQ+T +SR+ DE+ANQPHVPSRP+VG+S+FAHKGGLHVAAVLKD +TYQHI+P +VGNERR+LVSELSGR NI++K +E G+  +  + +VK+    +K VL Q+KELEN GY+FEGAEAS+ELM+RR +  Y  PFELLDF+V+T  +    G D +     P  +S +QA V++ LL   +  DMC  +   E+ EGNGPVDA+N A+++ LLP +  L  + LVDY+VRILDN S T AITRV + F++    + WTTV AHPNII+AS+N+L+DGFE AM  +  P C++
Sbjct:   76 VDIYDTTLRDGSQGEGISFSVEDKLRILQRLDDLGVAFIEGGWPGSNPKDAAFFEAAKKVPLKNAKLAAFGSTRYKNVLCEQDANLAALLEAQTPVVTIVGKAAKKQVELVLSASPEENLAMISESVHYLVSHGRTVMFDAEHFFDGYQADREYALQCCRAAAEAGAHVIVLCDTNGGSTPWQIECITATVSKELTLLEQSGRAAATKVGIHCHNDMELAVANSVAAVRGGASLVQGTANGLGERTGNANLMSIIPILALKMGRSCLADISKLSQMTSMSRFIDEMANQPHVPSRPFVGASAFAHKGGLHVAAVLKDESTYQHIDPKIVGNERRVLVSELSGRGNIVSKMQEFGILSESSD-SVKK---NSKLVLDQIKELENCGYTFEGAEASVELMIRRAMASYTSPFELLDFNVTTGKRSANEGGDFSQKSNVPFGDSPSQAVVRMRLLVGDE--DMCAVRNTLEVGEGNGPVDALNAAIRRSLLPFFPSLAELVLVDYKVRILDNESATRAITRVSITFKDVGENREWTTVSAHPNIIIASLNSLLDGFEFAMLSRHGPDCLV 636          
BLAST of Ggra7422.t2 vs. uniprot
Match: A0A7C5E488 ((R)-citramalate synthase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5E488_9CHLR)

HSP 1 Score: 595 bits (1533), Expect = 1.410e-206
Identity = 303/544 (55.70%), Postives = 400/544 (73.53%), Query Frame = 0
Query:   30 VYVYDTTLRDGSQGEGISFTVPDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRDLQ--NAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPTVKIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVG-EQLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNAAPRNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAM 570
            +++YDTTLRDG+QGEGIS +  DK+KIA  LD+FG HYIEGGWPGSNPKD  FFA+  +L+  +AK+ AFGSTRYK TTC+KD N+ AL+ A+TPVVTLVGK+W+  V  +LE  LEENL MI+E+V YFK RG+EV+ DAEHFFDGYKA+  YAL  L +A+++G D +VLCDTNGG+ PWE+E+IT+ V ++F   ++GIH HND EL V+N++A V  GA  VQGT+NG+GER GNANL+SI+P LQLKMGY CV  EQL+ LT +SRY DE+AN    P +P+VG S+FAHKGG+HVAA+LK   +YQH++P +VGNE+R +VSELSGR NI+ KA E GL    +E         A+ VL Q+KELEN+GY+FEGAEAS+++MLRR   GY+PPFE++DF V T+N++   G            T+A+VK+ +      GD    ++   +AEGNGPV+A+N AL++ L   +  L+ V L D++VRILD+ +GTAA TRVM++F++    + WTTV AHPNII AS  AL+D  E A+
Sbjct:    4 IFLYDTTLRDGTQGEGISLSCNDKLKIAQKLDEFGAHYIEGGWPGSNPKDAEFFARQGELKLKHAKIAAFGSTRYKNTTCDKDANIQALVEANTPVVTLVGKSWDLHVRHILETDLEENLEMIAESVAYFKERGKEVIYDAEHFFDGYKANPDYALLTLQAAIKSGADCVVLCDTNGGSTPWEVEEITKQVAARFEGQRLGIHPHNDCELGVANALAGVRGGARHVQGTVNGYGERVGNANLISIIPDLQLKMGYECVKPEQLAGLTALSRYVDELANMTPNPHQPFVGYSAFAHKGGIHVAAILKVEESYQHMDPTVVGNEKRAVVSELSGRGNILYKAAERGLDTSREE---------ARQVLEQIKELENQGYTFEGAEASVDMMLRRANSGYKPPFEVIDFMVITENRQ---GRGL--------FTEATVKVKV------GD----EIRHTVAEGNGPVNALNLALRRALYQDFPQLQRVHLTDFKVRILDSDAGTAATTRVMIDFQQEGTTEFWTTVGAHPNIIEASWRALIDSMEYAL 517          
BLAST of Ggra7422.t2 vs. uniprot
Match: A0A3M1GUB2 ((R)-citramalate synthase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1GUB2_9CHLR)

HSP 1 Score: 594 bits (1532), Expect = 2.470e-206
Identity = 303/544 (55.70%), Postives = 395/544 (72.61%), Query Frame = 0
Query:   30 VYVYDTTLRDGSQGEGISFTVPDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRDL--QNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPTVKIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVG-EQLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNAAPRNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAM 570
            +++YDTTLRDG+QGEGIS +  DK+KIA  LD+FGVHYIEGGWPGSNPKD  FFA+  +L  ++AK+ AFGSTRYKG TC+ D N+ ALL A+TPVVTL GK+W+  VT VLE  LEENL MI E+V YFK RG+EV+ DAEHFFDGYKA+  YA+  L +AV  G D LVLCDTNGGT+PWE+E+IT  V  +FP V+IGIH HND EL V+N++A V  GA  +QGT+NG+GER GNANL+SI+P LQ+KMGY CV  EQL++LT+++ Y DEIAN      +PYVG S+FAHKGG+H AA+ K   +YQHI+P +VGN RR +VSEL+GR NI+  A+ LGL    +E         A+ ++ Q+K+LE +GY+FEGAEAS+++M+RR  EGY+PPFE++DF V T+N++   G            T+A+VK+ +      GD    K+   ++EGNGPV+A+N AL++ L   +  LR + L DY+VRILD+ SGTAA TRVM++F + +  K WTTV AHPNII AS  AL+D  E A+
Sbjct:    4 LFIYDTTLRDGTQGEGISLSCNDKLKIAKKLDEFGVHYIEGGWPGSNPKDAEFFARQGELNLKHAKIAAFGSTRYKGNTCDNDPNIQALLAANTPVVTLFGKSWDLHVTHVLETDLEENLDMILESVRYFKNRGKEVIYDAEHFFDGYKANPEYAMLTLKAAVNGGADCLVLCDTNGGTMPWEVEEITATVQKQFPEVQIGIHAHNDAELGVANTLAGVRGGAVHIQGTVNGYGERVGNANLVSIIPDLQIKMGYRCVSDEQLAKLTELAHYVDEIANLTPNSHQPYVGQSAFAHKGGVHAAAIRKVEESYQHIDPSLVGNRRRTIVSELAGRGNILDMAEALGLKTTKEE---------ARQIVQQIKDLEAEGYAFEGAEASVQMMIRRASEGYKPPFEVIDFMVVTENRQ---GRGL--------FTEATVKVKV------GD----KIRHTVSEGNGPVNALNLALRQALYEDFPQLRHIHLSDYKVRILDSDSGTAATTRVMIDFYDETRPKTWTTVAAHPNIIEASWRALIDSMEYAL 517          
BLAST of Ggra7422.t2 vs. uniprot
Match: M1UUK7 ((R)-citramalate synthase n=2 Tax=cellular organisms TaxID=131567 RepID=M1UUK7_CYAM1)

HSP 1 Score: 584 bits (1506), Expect = 2.770e-199
Identity = 323/617 (52.35%), Postives = 402/617 (65.15%), Query Frame = 0
Query:   30 VYVYDTTLRDGSQGEGISFTVPDKIKIAHHLD-QFGVHYIEGGWPGSNPKDEAFFAQCRD-----LQNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKF---PTVKIGIHCHNDMELAVSNSIAAVHAGASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGE--QLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGN-------------------------------DTNAAP----------------------------------RNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAM 570
            + +YDTTLRDG+QGEGIS +  DK++IA  LD + GV YIE GWPGSNPKDE FF + +      ++NAKLVAFG+TR+KGT C+ D  + +LL A+TP VT+V K W+ QV  VL  SL+EN+ MI +TV Y K  GREVMLDAEHFFD Y+A++SYA+ CL +AV+AG DVLVLCDTNG   PW +E++ +VV S+F   P V++GIHCHNDMELAV+NSIAAV  GA+L+QG +NG+GERTGNANLMSI+P LQL++GY+ V     L  LT VSR+ DEIAN+PHVP R +VG S+FAHKGGLHVAA+LKD  +YQ I+P +VGN  R+LVSELSGR NI +K + L L  D   E    W  R   +L ++K LENKG++FEGAEASL +M RR +  Y  PFEL+DFSV T NKRV+Y N                               D  AAP                                  RNE+ T A VK+ + G        PT    E AEGNGPVDAVN A+++ LL  +  L  +SL DY+VRILD+ S TAA TRV+V F +   G R+TTV A  NIIVASVNAL+DG E A+
Sbjct:  126 IQIYDTTLRDGTQGEGISLSCQDKLRIAAELDAKLGVAYIEAGWPGSNPKDEQFFLRAKQELLPRMRNAKLVAFGATRHKGTPCDADPQLGSLLRAETPTVTIVAKTWDFQVLQVLGTSLDENIRMIRDTVSYLKAAGREVMLDAEHFFDAYEANASYAMQCLEAAVEAGADVLVLCDTNGAATPWVVENVMRVVQSRFESSPGVRLGIHCHNDMELAVANSIAAVRGGATLLQGCVNGYGERTGNANLMSIIPILQLRLGYSVVASTTHLQNLTAVSRFVDEIANRPHVPWRAFVGESAFAHKGGLHVAAMLKDPRSYQFIDPALVGNRPRVLVSELSGRGNIQSKLRSLNLAFD---ERDPVWKARITKILERIKALENKGFTFEGAEASLAMMWRRAVPNYVAPFELVDFSVFTGNKRVLYVNQEGCFTPEDPEDAEDSWFSEPLARSLSEGARDGTAAPVTGGPLFVTPLPSAQIPERNSRRALARDPSVAVWRNETHTHAVVKVLVHGA------APT---LECAEGNGPVDAVNAAMRRALLGSFPELEHISLEDYKVRILDSESATAATTRVLVSFHDRKRGLRFTTVSADTNIIVASVNALVDGLEYAL 730          
BLAST of Ggra7422.t2 vs. uniprot
Match: A0A1X6PBH0 ((R)-citramalate synthase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBH0_PORUM)

HSP 1 Score: 577 bits (1486), Expect = 5.690e-199
Identity = 303/535 (56.64%), Postives = 378/535 (70.65%), Query Frame = 0
Query:   52 DKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRDL--QNAKLVAFGSTRYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMISETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLCDTNGGTLPWEIEDITQVVVSKFPTVKIGIHCHNDMELAVSNSIAAVHA-----GASLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGEQLSQLTKVSRYADEIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERRILVSELSGRRNIITKAKELGL-HPDGDEENVKEWNMRAKSVLAQVKELENKGYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNAAPRNESVTQASVKLALLGPKDG-GDMCPTKVCFEIAEGNGPVDAVNGALQKCLLPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQC 577
            DK+++   LD+FGV YIEGGWPGSN KD  FFA+   L  +NA+LVAFGSTR+K  T   D N+ ALL++  PV+TLVGKA   QV VVL A   +NLAMIS +V + K  GREV+LDAEHFFDGYKAD  YAL+C+ +A  AG D +VLCDTNGG  PWE+  +T  V + FP +++GIHCHND  +AV+NS+AAV A        +VQGT+NG+GERTGNANL +I+P L LK+G   +   +  LT +SR+ DE+AN PH    P+VG+S+FAHKGG+HVAAVLKDA+TYQH++P +VGN  R+LVSELSGR N+++KA+ELGL  P     +V  W  RA+ VL QVK LE+ G +FE AEAS+ELMLRRT +GYR PF LLDFSV T  +    G     A   ++VT+A++KL LLG   G GD CP  VC E+ EGNGPVDAVN ALQ+ L   Y  L  V L DY+VRILD    TAA TRVMVE   S   + WTTV AHPNIIVASV AL+DG+E  +  ++P+C
Sbjct:    2 DKLRVVTRLDEFGVDYIEGGWPGSNAKDAEFFARAATLPLRNARLVAFGSTRHKAATPASDANLAALLDSGAPVLTLVGKACAYQVRVVLGAGAGDNLAMISSSVAHLKAAGREVLLDAEHFFDGYKADPPYALACVAAAASAGADAVVLCDTNGGCTPWEVGAMTAAVAAAFPGLRLGIHCHNDCGMAVANSVAAVRALSGTRSGCVVQGTVNGYGERTGNANLTTIIPVLGLKLGVP-LRVAMGALTSLSRFVDEVANVPHAGGAPFVGASAFAHKGGIHVAAVLKDADTYQHVDPAVVGNATRVLVSELSGRGNLLSKARELGLLSPTAPAADVDAWGARARRVLGQVKALEHAGCTFEAAEASVELMLRRTADGYRSPFVLLDFSVLTGLRASTGGGGAGGA---DTVTRATIKLELLGGDAGDGDACPVCVCLEVGEGNGPVDAVNAALQRALRGAYSVLDGVVLSDYKVRILDAERATAATTRVMVEM--SDGPRSWTTVGAHPNIIVASVQALLDGYEYVLARRMPEC 530          
The following BLAST results are available for this feature:
BLAST of Ggra7422.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHB10.000e+082.59(R)-citramalate synthase n=1 Tax=Gracilariopsis ch... [more]
R7QGZ55.050e-30072.83(R)-citramalate synthase n=1 Tax=Chondrus crispus ... [more]
M2Y7B21.620e-23460.75(R)-citramalate synthase n=1 Tax=Galdieria sulphur... [more]
A0A7S1ES518.080e-22859.12(R)-citramalate synthase n=1 Tax=Timspurckia oligo... [more]
A0A7S0G5Y82.780e-22760.29(R)-citramalate synthase n=2 Tax=Rhodosorus marinu... [more]
A0A5J4YVN81.070e-22559.26(R)-citramalate synthase n=1 Tax=Porphyridium purp... [more]
A0A7C5E4881.410e-20655.70(R)-citramalate synthase n=1 Tax=Anaerolineae bact... [more]
A0A3M1GUB22.470e-20655.70(R)-citramalate synthase (Fragment) n=1 Tax=Chloro... [more]
M1UUK72.770e-19952.35(R)-citramalate synthase n=2 Tax=cellular organism... [more]
A0A1X6PBH05.690e-19956.64(R)-citramalate synthase n=1 Tax=Porphyra umbilica... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 380..400
NoneNo IPR availableGENE3D1.10.238.260coord: 310..416
e-value: 1.7E-21
score: 78.6
NoneNo IPR availableCDDcd07941DRE_TIM_LeuA3coord: 32..301
e-value: 0.0
score: 516.622
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 26..316
IPR0137092-isopropylmalate synthase LeuA, allosteric (dimerisation) domainSMARTSM00917LeuA_dimer_2coord: 405..570
e-value: 9.4E-19
score: 78.3
IPR0137092-isopropylmalate synthase LeuA, allosteric (dimerisation) domainPFAMPF08502LeuA_dimercoord: 406..567
e-value: 6.2E-18
score: 65.0
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 30..296
e-value: 5.1E-42
score: 144.2
IPR000891Pyruvate carboxyltransferasePROSITEPS50991PYR_CTcoord: 30..293
score: 33.462513
IPR0362302-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamilyGENE3D3.30.160.270coord: 476..569
e-value: 1.3E-14
score: 56.2
IPR0362302-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamilySUPERFAMILY1109212-isopropylmalate synthase LeuA, allosteric (dimerisation) domaincoord: 481..565
IPR005675Citramalate synthaseTIGRFAMTIGR00977TIGR00977coord: 30..569
e-value: 5.9E-192
score: 636.5
IPR005675Citramalate synthasePANTHERPTHR43538ALPHA-IPM SYNTHASE/HOMOCITRATE SYNTHASEcoord: 28..570
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 26..309
e-value: 2.2E-71
score: 242.7
IPR002034Alpha-isopropylmalate/homocitrate synthase, conserved sitePROSITEPS00815AIPM_HOMOCIT_SYNTH_1coord: 37..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:1090745..1092484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7422.t2Ggra7422.t2Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 1090745..1092484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7422.t2 ID=Ggra7422.t2|Name=Ggra7422.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=580bp
MVAPARRKSEQVTPLTEQNSSTLVKQQKTVYVYDTTLRDGSQGEGISFTV
PDKIKIAHHLDQFGVHYIEGGWPGSNPKDEAFFAQCRDLQNAKLVAFGST
RYKGTTCEKDKNVLALLNADTPVVTLVGKAWNKQVTVVLEASLEENLAMI
SETVDYFKLRGREVMLDAEHFFDGYKADSSYALSCLNSAVQAGVDVLVLC
DTNGGTLPWEIEDITQVVVSKFPTVKIGIHCHNDMELAVSNSIAAVHAGA
SLVQGTINGFGERTGNANLMSIVPTLQLKMGYNCVGEQLSQLTKVSRYAD
EIANQPHVPSRPYVGSSSFAHKGGLHVAAVLKDANTYQHINPDMVGNERR
ILVSELSGRRNIITKAKELGLHPDGDEENVKEWNMRAKSVLAQVKELENK
GYSFEGAEASLELMLRRTLEGYRPPFELLDFSVSTDNKRVVYGNDTNAAP
RNESVTQASVKLALLGPKDGGDMCPTKVCFEIAEGNGPVDAVNGALQKCL
LPVYKPLRTVSLVDYRVRILDNASGTAAITRVMVEFEESSNGKRWTTVYA
HPNIIVASVNALMDGFEVAMWDQLPQCIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0137092-isopropylmalate_synth_dimer
IPR000891PYR_CT
IPR036230LeuA_allosteric_dom_sf
IPR005675Citramal_synthase
IPR013785Aldolase_TIM
IPR002034AIPM/Hcit_synth_CS