Ggra7360.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7360.t1
Unique NameGgra7360.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
BLAST of Ggra7360.t1 vs. uniprot
Match: A0A2V3J1D6 (Rhomboid-like protein 15 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1D6_9FLOR)

HSP 1 Score: 361 bits (926), Expect = 6.410e-121
Identity = 188/304 (61.84%), Postives = 235/304 (77.30%), Query Frame = 0
Query:    2 LLHLLGNPPFVTLAVFAACVLLFLPPLSSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVIDALAATRFRNDCTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFVDRFRQACQRLWAYVT-AAFSSPGPQSFSGPGHTLGAGAQSAPAGRIPPHSRLLR 304
            +L LLG+PPF TLA+   C+LLF+P ++  ST A CL+P RV  S Q+YRIFT+ FFHAGF HILFN+IAW +LAN FE TVG+LGA Y+IFVLF+PLSALL+  V+F+IDALA+T+FRNDC VGISGVLF+ILVVNIHV+ T+S+SFFG F+I A WYPW+LA ILQLLSP+LSF+GH+ GIL+GYALVLGYLR +TPSD  L+ VE KL L + PLW+ N SI+ ++YA+RSFLPQ T S S + SF+   R A  R  +++T ++ SS   Q F+  G TLG   QS   GR+P HSRLLR
Sbjct:    1 MLQLLGDPPFCTLAIAVICLLLFIPNIARTSTFAVCLLPTRVFSSAQVYRIFTYPFFHAGFFHILFNLIAWFMLANNFEKTVGTLGAFYVIFVLFIPLSALLQCAVSFIIDALASTQFRNDCAVGISGVLFAILVVNIHVSATSSISFFGLFNISANWYPWVLAVILQLLSPRLSFMGHISGILMGYALVLGYLRVITPSDEALHSVEDKLGLRTWPLWQSNPSIVDLTYATRSFLPQATSSSSNNRSFMQSVRDAGSRFLSWLTPSSASSSSTQPFASRGQTLGGNTQSPATGRVPSHSRLLR 304          
BLAST of Ggra7360.t1 vs. uniprot
Match: R7Q9I5 (Rhomboid domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9I5_CHOCR)

HSP 1 Score: 269 bits (688), Expect = 9.850e-85
Identity = 153/315 (48.57%), Postives = 201/315 (63.81%), Query Frame = 0
Query:    2 LLHLLGNPPFVTLAVFAACVLLFLPPLSSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVIDALAATRFRNDCTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFVDRFRQACQRLWAYVTAAFSSP----GPQSFSGPGHTLGAGAQSAPAGRIPPHSRLLREAAEQQST 312
            +L  +G+P  +TL +   CV+L+L         A CL P++V   L +YRIFT  FFH G  HILFN IAW+I+   +E T+G+L A Y IFVL +PL A+L    A++IDALA T FRN+C +G+SGVLF+ILVVN+ V+   SV+ FGFF +P +WYPW LAAILQLLSP+LS LGHL GI+LGYALV GYL  L+PSD+ L   E    L S+PLW+P ++   +  A  S LPQTT      S +V+         W+  T+ FSS       + F+G G  LG+G  SA  GR+P +SRL+REA  Q +T
Sbjct:   18 MLEAIGSPRLLTLFIATVCVVLYLAQAYQARPGAICLSPSKVFTQLAVYRIFTSPFFHGGLFHILFNTIAWMIIGRDYERTIGTLAATYSIFVLLIPLIAILHCSAAYLIDALAQTSFRNECAIGLSGVLFAILVVNVEVSPGTSVNVFGFFSMPKRWYPWALAAILQLLSPRLSILGHLSGIVLGYALVYGYLNRLSPSDYKLEDFEITTGLASMPLWQPLTTSTGMPVAGASVLPQTT------SPYVESGSAGRPSPWSQFTSWFSSVFSGGNDRPFAGQGRPLGSGDPSATGGRVPQNSRLIREAGSQSTT 326          
BLAST of Ggra7360.t1 vs. uniprot
Match: A0A835HDM2 (UBA domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HDM2_9MAGN)

HSP 1 Score: 138 bits (347), Expect = 9.510e-34
Identity = 100/282 (35.46%), Postives = 145/282 (51.42%), Query Frame = 0
Query:   10 PFVTLAVFAACVLLFLPPL--SSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVI---DALAATRFRNDCTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFVDR--FRQACQRLWAYVTAAFSSPGPQSFSGPGHTL 284
            PF+T A+   C  ++L  L     S T  C +P  V+P  Q+YRIFT   FH   LH+LFNM+A V L +  E  +GS+  +Y+I +L +  +AL+ + +A ++        T   N+C +G SG+LFS++V+   ++G  S S FG F++PAKWY W+L  + QLL   +S LGHL GIL GYA   G    L P    LY   +  +L S  + +P   IL        ++P  T  +S  SS +    +R     +    TA   S     F G G TL
Sbjct:   23 PFLTSAIVIVCGAIYLVCLFVGYDSFTEICFLPDAVVPHFQVYRIFTSILFHGSLLHVLFNMLALVPLGSELERIMGSVRLLYVIIILAIS-NALIHLSIALLVAYNPFSQHTYLVNECAIGFSGILFSMIVIETSLSGAQSRSVFGLFNVPAKWYVWILLIVFQLLMKNVSLLGHLCGILSGYAYAYGLFNVLLPGSS-LYSTIESSSLLSTCVRRPKF-ILCTGGNPSGYMPTHTSPNSPPSSLISSNIWRNLSSWMPQRETAVAQSTQDSRFPGRGRTL 301          
BLAST of Ggra7360.t1 vs. uniprot
Match: A0A4D9BSV2 (UBA domain-containing protein n=3 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BSV2_SALSN)

HSP 1 Score: 137 bits (346), Expect = 1.420e-33
Identity = 96/283 (33.92%), Postives = 150/283 (53.00%), Query Frame = 0
Query:   10 PFVTLAVFAACVLLFLPPL--SSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVIDALAATRF---RNDCTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFV--DRFRQACQRLWAYVTAAFSSPGPQSFSGPGHTLG 285
            PF+T  + A C  ++L  L     S    C +P+ V+   Q+YR FT   FH   LH+LFNM+A V + +  E  +GS+  +Y+I +L +  SA+L +V+A V      + +    + C++G SG+LFS++V+   ++G  S SFFG F++PAKWY W+L  + QLL   +S LGHL GIL GYA   G+   L P       +E+  +L S  + +P   IL         +P  T  ++A+S  +  + +R     +    ++  +S G   F G G TLG
Sbjct:   23 PFLTSVIVAVCGAIYLVCLLVGYDSFVEVCFLPSAVISHFQVYRAFTSIVFHGSMLHVLFNMMALVPMGSELERIMGSIRLLYIIILLAIS-SAILHLVIALVAAYNPISFYPALMHQCSIGFSGILFSMIVIETSLSGVQSRSFFGLFNVPAKWYVWILLVVFQLLMANVSLLGHLCGILSGYAYTFGFFDILIPGGSFYSSIEES-SLLSACVRRPKF-ILSTGSNVSGHIPTYTSQNTAASGLLSGNTWRNLSSWMPRRESSVETSQGSDRFPGRGRTLG 302          
BLAST of Ggra7360.t1 vs. uniprot
Match: rhomboid-like protein 15 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D06DC (rhomboid-like protein 15 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D06DC)

HSP 1 Score: 137 bits (344), Expect = 2.780e-33
Identity = 100/291 (34.36%), Postives = 153/291 (52.58%), Query Frame = 0
Query:   10 PFVTLAVFAACVLLFLPPL--SSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVI---DALAATRFRNDCTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFVDRFRQACQRLWAYVTAAF-----SSPGPQS---FSGPGHTLGAG 287
            PF+T AV   C +++L  L     S    C +P+ V+P  Q+YRI+T   FH   LH+LFNM+A V L +  E  +GS+  +Y+I VL    +A+L +++A ++          F N+C +G SG+LFS++V+   ++G  S S FG F++PAKWY W+L  + QLL   +S LGHL GIL G+A + G    L P     Y   +  +L S  + +P   IL     S  ++P  +  ++ SS F      +   +W  +++       S+  PQ    F G G  LGAG
Sbjct:   23 PFLTSAVVIVCGVIYLVCLLVGYDSFYEICFLPSAVIPHFQVYRIYTSILFHGSLLHVLFNMLALVPLGSELERIMGSVRLLYMI-VLLATTNAILHLLIALLVFHNPFHPFEYFMNECAIGFSGILFSMIVIESSLSGVQSRSVFGLFNVPAKWYAWILLIVFQLLMTNVSLLGHLCGILSGFAYIYGLFNFLIPGSSF-YSAIESSSLLSSCVRRPKF-ILCTGGNSSGYIPTYSGQNTTSSGF------STGNIWRNLSSWMPQREASAQSPQENLRFPGRGRALGAG 304          
BLAST of Ggra7360.t1 vs. uniprot
Match: A0A834D2I0 (UBA domain-containing protein n=10 Tax=Juglandaceae TaxID=16714 RepID=A0A834D2I0_JUGRE)

HSP 1 Score: 136 bits (342), Expect = 6.230e-33
Identity = 99/288 (34.38%), Postives = 150/288 (52.08%), Query Frame = 0
Query:   10 PFVTLAVFAACVLLFLPPL--SSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVIDALAATRFR------NDCTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFVDR--FRQACQRLWAYVTAAFSSPGPQSFSGPGHTLGAG 287
            PF+T AV   C +++L  L     S    C +P+ VL   Q+YRI+T  FFH   LH+LFNM+A + L +  E  +GS+  +Y+I +L    +A+  +++A V+   A   F       N+C++G SG++FS +V+   ++G  S S FG F++PAKWY  +L  +LQLL   +S +GHL GIL G+A   G    L P       +E    L+S   W     IL     S  F+P  +  ++ASS       +R     +    ++A S+   Q F G G TLG+G
Sbjct:   35 PFLTSAVVVVCGIIYLVCLLVGYDSFFEICFLPSAVLSRFQVYRIYTSIFFHGSLLHVLFNMLALIPLGSELERIMGSVRFLYMI-ILLATSNAIFHLLIALVV---AHNPFHPYLFLMNECSIGFSGIIFSTIVIETRLSGIQSRSVFGLFNVPAKWYALILLIVLQLLMTNVSLVGHLCGILSGFAYAYGLFNFLMPGTSFYSSIESSSWLSSCVRWP--KFILCTGENSAGFIPTYSSQNTASSGLFSGNIWRNLLSWMPQRESSAQSTEDSQRFLGRGRTLGSG 316          
BLAST of Ggra7360.t1 vs. uniprot
Match: A0A2G9HL80 (Rhomboid family protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HL80_9LAMI)

HSP 1 Score: 135 bits (341), Expect = 6.850e-33
Identity = 93/292 (31.85%), Postives = 155/292 (53.08%), Query Frame = 0
Query:   10 PFVTLAVFAACVLLFLPPL--SSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVIDALAATRFRND------CTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFV--DRFRQACQRLWAYVTAAFSSPGPQSFSGPGHTLGAGAQSA 291
            PF+T A+   C +++L  L     S    C +P+ ++   Q+YR +T   FH   LH LFNM+A V + +  E  +GS+   Y++ +L    +A+L +++A ++   A   FR+D      C++G SG+LFS++V+   ++G  S SFFG F++PA+WY W+L  + QLL   +S LGHL GIL GYA + G    L P       +E    L++  + +P   I+     + S++P  T   + SS  +  + +R     +    ++A ++ G   F G G T+G+G   A
Sbjct:   23 PFLTSAIVIVCGIIYLVCLFVGYDSFVEVCFLPSAIVSRFQVYRFYTAILFHGSLLHYLFNMLALVPMGSELERIMGSIRLSYIV-ILLATSNAILHLLMALLV---AHNPFRHDPYLMDQCSIGFSGILFSMIVIETSLSGVQSRSFFGLFNVPAQWYVWILLVVFQLLMTNVSLLGHLCGILSGYAYIFGLFNVLIPGTSFYSSIESSSWLSTC-VRRPKF-IMSTGSNTSSYIPTYTSQSTTSSGLLSGNMWRNLSSWMPQRESSAETAQGDDRFPGRGRTVGSGTNQA 308          
BLAST of Ggra7360.t1 vs. uniprot
Match: A0A803N0C2 (UBA domain-containing protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803N0C2_CHEQI)

HSP 1 Score: 135 bits (341), Expect = 6.970e-33
Identity = 97/292 (33.22%), Postives = 152/292 (52.05%), Query Frame = 0
Query:   10 PFVTLAVFAACVLLFLPPL--SSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVI---DALAATRFRNDCTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFVDRFRQACQRLWAYV--------TAAFSSPGPQS--FSGPGHTLGA 286
            PF+T AV A C  ++L  L     S    C +P+ ++   Q+YRI+T   FH  FLH+ FNM+A V L +  E  +GS+  +Y + +L +  +A+L +++A ++        +   N+C +G SG+LFS++V+   ++G  S S FG F++PAKWYPW+L  + QLL   +S LGHL GIL G+A   G    + P       +E    L++  + +P   IL        ++P  T  +S SS        A   LW+++        T++ S+   Q   F G G TLGA
Sbjct:   23 PFITSAVVAVCAAIYLVCLLIGYDSFVGICFLPSAIISQFQVYRIYTSILFHGSFLHVFFNMLALVPLGSELERIMGSVRLLYTVLLLALS-NAVLHLLIALLVAYNPFYPYSFLMNECAIGFSGILFSMIVIETSLSGVHSRSVFGLFNVPAKWYPWILLLVFQLLLTNISLLGHLSGILSGFAYTYGIFNLVIPGTSFFSGIENSTWLSAC-VRRPKF-ILCTGGNPSGYIPSYTNPNSTSSG------SATTNLWSHLSSLMPQRDTSSQSTDSTQDTRFPGRGRTLGA 305          
BLAST of Ggra7360.t1 vs. uniprot
Match: A0A251N8P7 (UBA domain-containing protein n=6 Tax=Prunus TaxID=3754 RepID=A0A251N8P7_PRUPE)

HSP 1 Score: 135 bits (339), Expect = 1.390e-32
Identity = 100/289 (34.60%), Postives = 151/289 (52.25%), Query Frame = 0
Query:   10 PFVTLAVFAACVLLFLPPL--SSISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVI---DALAATRFRNDCTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSFV--DRFRQACQRLWAYVTAAFSSPGPQSFSGPGHTLGAGAQSA 291
            PF+T AV   C  ++L  L     S    C +P+ VL   Q+YRIFT   FH   LH+LFNM+A V L +  E  +GS+  +Y+IF+L +  +AL  + +A ++      +     N+C +G SG+LFS++V+   ++G  S S FG F++PAKWY W+L  + Q++   +S LGHL GIL G+A   G    L P     Y   +  +L S  + +P   IL       +F+P  +   +ASS F     +R     +    T+A S+     F G G TLG+G  +A
Sbjct:   23 PFLTSAVVGVCGTVYLICLLVGYDSFYEICFLPSAVLSRFQVYRIFTSIIFHGSVLHVLFNMMALVPLGSELERIMGSVRMLYIIFLLAIS-NALFHLTIALLVAYNPIHSDPYLMNECAIGFSGILFSMIVIETSLSGHQSRSVFGLFNVPAKWYVWILLVVFQVVMTNVSLLGHLCGILSGFAYTYGLFNFLIPGPSF-YSTIEATSLLSTCVRRPKF-ILCTGGNPSAFIPTYSSQGTASSGFSAGSVWRNLSSWIPQRETSAQSAQDGHMFPGRGRTLGSGRNTA 308          
BLAST of Ggra7360.t1 vs. uniprot
Match: A0A5A7QHI7 (Rhomboid family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QHI7_STRAF)

HSP 1 Score: 134 bits (337), Expect = 2.110e-32
Identity = 79/205 (38.54%), Postives = 123/205 (60.00%), Query Frame = 0
Query:   10 PFVTLAVFAACVLLFLPPLSS--ISTTATCLVPARVLPSLQLYRIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLSALLEIVVAFVI--DALAATRFRND-CTVGISGVLFSILVVNIHVTGTASVSFFGFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTPSDHMLYQVE 209
            PF+T AV   C +++L  L +   S T  C +P+ V+   Q+YR++T   FH   LH++FNM+A V + +  E  +GS+  +Y+I +L    +ALL +V+A ++  +     +F  D C++G SG+LFS++V+   ++G  S SFFG F++PA+WY W+L A+ QLL   +S LGHL GIL GYA + G    L P       +E
Sbjct:   23 PFLTSAVVVVCGIIYLVCLLAGYDSFTEVCFLPSAVVSHFQVYRMYTAILFHGSLLHVMFNMMAMVPMGSELERIMGSIRLLYII-ILLAASNALLHLVIALLVAHNPFHPDQFLMDQCSIGFSGILFSMIVIETSLSGVQSRSFFGLFNVPAQWYVWILLAVFQLLMTNVSLLGHLSGILSGYAYIYGLFNVLIPGTSFYSSIE 226          
The following BLAST results are available for this feature:
BLAST of Ggra7360.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1D66.410e-12161.84Rhomboid-like protein 15 n=1 Tax=Gracilariopsis ch... [more]
R7Q9I59.850e-8548.57Rhomboid domain-containing protein n=1 Tax=Chondru... [more]
A0A835HDM29.510e-3435.46UBA domain-containing protein n=1 Tax=Coptis chine... [more]
A0A4D9BSV21.420e-3333.92UBA domain-containing protein n=3 Tax=Salvia splen... [more]
rhomboid-like protein 15 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D06DC2.780e-3334.36rhomboid-like protein 15 n=1 Tax=Carica papaya Tax... [more]
A0A834D2I06.230e-3334.38UBA domain-containing protein n=10 Tax=Juglandacea... [more]
A0A2G9HL806.850e-3331.85Rhomboid family protein n=1 Tax=Handroanthus impet... [more]
A0A803N0C26.970e-3333.22UBA domain-containing protein n=2 Tax=Chenopodium ... [more]
A0A251N8P71.390e-3234.60UBA domain-containing protein n=6 Tax=Prunus TaxID... [more]
A0A5A7QHI72.110e-3238.54Rhomboid family protein n=1 Tax=Striga asiatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 4..198
e-value: 1.8E-22
score: 81.9
IPR035952Rhomboid-like superfamilySUPERFAMILY144091Rhomboid-likecoord: 8..197
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 47..196
e-value: 2.2E-20
score: 73.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..346
NoneNo IPR availablePANTHERPTHR11009:SF25RHOMBOID-LIKE PROTEIN 15coord: 8..335
NoneNo IPR availablePANTHERPTHR11009DER1-LIKE PROTEIN, DERLINcoord: 8..335
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..111
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:876472..877512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7360.t1Ggra7360.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 876472..877512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7360.t1 ID=Ggra7360.t1|Name=Ggra7360.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MLLHLLGNPPFVTLAVFAACVLLFLPPLSSISTTATCLVPARVLPSLQLY
RIFTFAFFHAGFLHILFNMIAWVILANRFEATVGSLGAVYLIFVLFVPLS
ALLEIVVAFVIDALAATRFRNDCTVGISGVLFSILVVNIHVTGTASVSFF
GFFDIPAKWYPWLLAAILQLLSPQLSFLGHLGGILLGYALVLGYLRSLTP
SDHMLYQVEQKLNLTSVPLWKPNSSILQISYASRSFLPQTTPSDSASSSF
VDRFRQACQRLWAYVTAAFSSPGPQSFSGPGHTLGAGAQSAPAGRIPPHS
RLLREAAEQQSTPDALSNTAADANSTAVEQTDSDASQGEKLSNQVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom