Ggra7359.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7359.t1
Unique Name	Ggra7359.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	159

Homology

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BLAST of Ggra7359.t1 vs. uniprot
Match: A0A2V3J1I9 (Cytochrome b5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1I9_9FLOR)

HSP 1 Score: 269 bits (687), Expect = 1.700e-90
Identity = 125/158 (79.11%), Postives = 142/158 (89.87%), Query Frame = 0

Query:    1 MRSTEDLPAYCSIEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEELRISRNTGNGSEKQTGTGFENAEILREWLNERTRSLRQVGVIGAVSAGIIVSAIIFKRYAIGWTTQGNR 158
            MRSTEDLPAY SIEVAKHSS  DAWLIVGGKVLD+TSWLSEHPGG+DVLLDLAGRDATREFEDVGHSSDARS+LDHLV+GTLRPATDEELRISRNTG G +K+ G GF+NAE+LREW++E+  S R+VG IGAVSA +++SA+I KRY +GWT QG R
Sbjct:    1 MRSTEDLPAYSSIEVAKHSSPEDAWLIVGGKVLDVTSWLSEHPGGEDVLLDLAGRDATREFEDVGHSSDARSQLDHLVVGTLRPATDEELRISRNTGTGPKKEGGMGFDNAEVLREWIHEKVSSFRRVGTIGAVSAAVLISAVIIKRYGMGWTAQGRR 158

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BLAST of Ggra7359.t1 vs. uniprot
Match: R7QKT8 (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKT8_CHOCR)

HSP 1 Score: 171 bits (433), Expect = 7.420e-52
Identity = 82/146 (56.16%), Postives = 110/146 (75.34%), Query Frame = 0

Query:    5 EDLPAYCSIEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEELRISRNTGNGSEKQTGTGF--ENAEILREWLNERTRSLRQVGVIGAVSAGIIVSAIIFKRY 148
            +D PA+ ++EVAKHSSA DAWLI+GG+VL+I+SWL +HPGGD VLLDLAGRDATREF+DVGHS DAR+RLD LVIG +R ATD+ELRI+R+ G  +    G G     A++   W  E   +L++ G+ GA +A ++V+A+  +RY
Sbjct:    2 DDPPAFTTLEVAKHSSAADAWLIIGGRVLNISSWLHDHPGGDVVLLDLAGRDATREFDDVGHSGDARARLDGLVIGEVRAATDDELRIARSGGAAARGGKGGGIAARGADLAASWARENGDALKRAGMWGAAAAAVVVAAVAVQRY 147

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BLAST of Ggra7359.t1 vs. uniprot
Match: A0A2V3IPU2 (Cytochrome B5 isoform D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPU2_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 6.270e-31
Identity = 60/114 (52.63%), Postives = 80/114 (70.18%), Query Frame = 0

Query:    9 AYCSIEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEELRIS----RNTGNGSEKQTGTGFENAEILREWL 118
            AY  +EVA+H+S++  W+++   V D+TS+L EHPGGDD+LLD +GRDATREFEDVGHSSDAR++L  L IG LR  T EE+ ++    R  G  +E Q G G  +A  L +WL
Sbjct:    6 AYPMVEVARHTSSSSCWMVIDSNVYDVTSFLLEHPGGDDILLDSSGRDATREFEDVGHSSDARAQLAELQIGELRDPTPEEVALAEQEARERGESAEAQKG-GVVSA--LAKWL 116

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BLAST of Ggra7359.t1 vs. uniprot
Match: R7QCY4 (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCY4_CHOCR)

HSP 1 Score: 114 bits (285), Expect = 1.080e-29
Identity = 52/110 (47.27%), Postives = 76/110 (69.09%), Query Frame = 0

Query:    6 DLPAYCSIEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEELRISRNTGNGSEKQTGTGFENAEILR 115
            D+  Y  IEVA+HS+A+  WL++ GKV D T +L EHPGGDD++++ +GRDATREFEDVGHS +AR++L+ L+IGTLR  T EE   + +    S ++       + +L+
Sbjct:    3 DMKEYPMIEVARHSTADSCWLVIDGKVYDTTDFLLEHPGGDDIVVESSGRDATREFEDVGHSGEARAQLEDLLIGTLRDPTPEETERAEDEARKSGEKPAAADAGSAMLK 112

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BLAST of Ggra7359.t1 vs. uniprot
Match: A0A7S0G445 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G445_9RHOD)

HSP 1 Score: 110 bits (274), Expect = 6.030e-28
Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 0

Query:   10 YCSIEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEE 89
            Y  +EVAKH    D W+++ GKV D+TS+L +HPGG+D+L++ +GRDATREFEDVGHS+DAR  L  L++GTLR  T+EE
Sbjct:    7 YSLLEVAKHDKRKDCWMVIHGKVYDVTSFLLDHPGGEDILVETSGRDATREFEDVGHSNDARGALKDLLLGTLREPTEEE 86

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BLAST of Ggra7359.t1 vs. uniprot
Match: M2Y577 (Cytochrome b5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y577_GALSU)

HSP 1 Score: 107 bits (267), Expect = 4.880e-27
Identity = 45/85 (52.94%), Postives = 64/85 (75.29%), Query Frame = 0

Query:   13 IEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEELRISRNTG 97
            +EVAKH++  DAW+++ GK+ D+T +L EHPGG++VLL++AGRDATREFEDVGHS +AR   +  ++G +R  T EEL  +   G
Sbjct:   10 VEVAKHNTKKDAWIVIDGKIYDVTQFLDEHPGGEEVLLEVAGRDATREFEDVGHSDEARELREKYLVGVVRKETKEELAQAEREG 94

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BLAST of Ggra7359.t1 vs. uniprot
Match: A0A5J4Z7Y1 (Cytochrome B5 isoform D n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7Y1_PORPP)

HSP 1 Score: 105 bits (262), Expect = 4.340e-26
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 0

Query:    6 DLPAYCSIEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEE 89
            D+  +  +EV +H+S  D W+++ GKV D+TS+L +HPGGDD+LL   GRDA REFEDVGHS DAR +L+ L +G LR  T EE
Sbjct:   15 DMKEFSMLEVLEHASRQDFWMVIDGKVYDVTSFLLDHPGGDDLLLQTLGRDAHREFEDVGHSGDARQKLEELFVGKLRDPTPEE 98

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BLAST of Ggra7359.t1 vs. uniprot
Match: A0A1X6NSS8 (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSS8_PORUM)

HSP 1 Score: 103 bits (256), Expect = 1.300e-25
Identity = 44/80 (55.00%), Postives = 62/80 (77.50%), Query Frame = 0

Query:   14 EVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEELRIS 93
            E+A H+S + AW+++ GKV DIT++L +HPGGD++LLD   RDAT+EFEDVGHS +AR++L  +VIG  RP T EE  ++
Sbjct:   14 ELADHTSRSSAWMLIDGKVHDITAFLDDHPGGDEILLDATARDATQEFEDVGHSGEARAQLAEMVIGVARPPTAEEAAVA 93

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BLAST of Ggra7359.t1 vs. uniprot
Match: A0A060T208 (ARAD1C28248p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T208_BLAAD)

HSP 1 Score: 101 bits (252), Expect = 8.950e-25
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0

Query:    1 MRSTEDLPAYCSIEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPA 85
            M  T++   Y + EVAKH+  +D WL+V GKV D+T ++ EHPGG++VL+D+ G+DAT EFEDVGHS DA   L  L+IG+  PA
Sbjct:    1 MSETQESKVYTAAEVAKHTDRDDLWLVVRGKVYDVTKFVDEHPGGEEVLVDVGGKDATSEFEDVGHSEDAEEILKGLLIGSTDPA 85

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BLAST of Ggra7359.t1 vs. uniprot
Match: M1VFN1 (Similar to cytochrome B5 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VFN1_CYAM1)

HSP 1 Score: 102 bits (254), Expect = 1.220e-24
Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 0

Query:   14 EVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEELRISR--NTGNGSEKQTGTGFENAEILREWL 118
            EVAKH+  +  WL++ GKV  +  +L+EHPGG+DVLL+ AGRDATREFEDVGHS  AR +L    IG +R  T EEL   R       +E++ G G     + +E L
Sbjct:   13 EVAKHADKDSCWLVIDGKVYAVEKFLNEHPGGEDVLLETAGRDATREFEDVGHSKSAREQLKEFYIGDVREPTAEELAAKRAVQASAAAERRDGDGVRANGLGKERL 119

The following BLAST results are available for this feature:

BLAST of Ggra7359.t1 vs. uniprot

BLAST of Ggra7359.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3J1I9	1.700e-90	79.11	Cytochrome b5 n=1 Tax=Gracilariopsis chorda TaxID=...	[more]
R7QKT8	7.420e-52	56.16	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A2V3IPU2	6.270e-31	52.63	Cytochrome B5 isoform D n=1 Tax=Gracilariopsis cho...	[more]
R7QCY4	1.080e-29	47.27	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A7S0G445	6.030e-28	58.75	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
M2Y577	4.880e-27	52.94	Cytochrome b5 n=1 Tax=Galdieria sulphuraria TaxID=...	[more]
A0A5J4Z7Y1	4.340e-26	54.76	Cytochrome B5 isoform D n=1 Tax=Porphyridium purpu...	[more]
A0A1X6NSS8	1.300e-25	55.00	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A060T208	8.950e-25	52.94	ARAD1C28248p n=1 Tax=Blastobotrys adeninivorans Ta...	[more]
M1VFN1	1.220e-24	47.66	Similar to cytochrome B5 n=1 Tax=Cyanidioschyzon m...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001199	Cytochrome b5-like heme/steroid binding domain	PRINTS	PR00363	CYTOCHROMEB5	coord: 57..64 score: 50.38 coord: 70..82 score: 36.83 coord: 32..42 score: 43.8 coord: 42..56 score: 57.17
IPR001199	Cytochrome b5-like heme/steroid binding domain	SMART	SM01117	Cyt_b5_2	coord: 10..83 e-value: 7.4E-23 score: 91.9
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 14..82 e-value: 6.0E-21 score: 74.4
IPR001199	Cytochrome b5-like heme/steroid binding domain	PROSITE	PS50255	CYTOCHROME_B5_2	coord: 7..83 score: 25.115219
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 5..96 e-value: 4.9E-28 score: 99.0
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 4..86
None	No IPR available	PANTHER	PTHR19359	CYTOCHROME B5	coord: 13..101
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 128..150
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 151..158
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..127
None	No IPR available	TMHMM	TMhelix		coord: 128..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000871_pilon	contig	tig00000871_pilon:875397..875983 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7359.t1	Ggra7359.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000871_pilon 875397..875983 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7359.t1 ID=Ggra7359.t1|Name=Ggra7359.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=159bp
MRSTEDLPAYCSIEVAKHSSANDAWLIVGGKVLDITSWLSEHPGGDDVLL
DLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDEELRISRNTGNGS
EKQTGTGFENAEILREWLNERTRSLRQVGVIGAVSAGIIVSAIIFKRYAI
GWTTQGNR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001199	Cyt_B5-like_heme/steroid-bd
IPR036400	Cyt_B5-like_heme/steroid_sf