Ggra7343.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7343.t1
Unique Name	Ggra7343.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	268

Homology

[Close]

BLAST of Ggra7343.t1 vs. uniprot
Match: A0A2V3J1G4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1G4_9FLOR)

HSP 1 Score: 278 bits (710), Expect = 3.090e-90
Identity = 152/267 (56.93%), Postives = 186/267 (69.66%), Query Frame = 0

Query:    1 MSRKRPLQNADTSSTKRYLNGALAAELRGLRISRTTDASQPSQKNAFGVTVPSSPFYSNNFSPNNGVPSFTQTPSGVVFGSDFAGSLPAEPLPDLKQNQLDPSHVVTNPDSPDSSSSSTPMDDDDTAPQSIVNVSVDNPMEVLPVEEYEAFPSSENRLVVYRPPIRTRGNVVSRVNAVLPDGSYILRNPKTDDWMFTARNRSESAKRKLALVRWSGDPHKKLRESFHQPSRVIPMPWHDNPTEVTVAEPPDEAPMAQEEDMEIEEIA 267
            MSRKR L   D    KRYLNGALAAELRGLRIS T   S+PS +NAFGV+   S FY+ NF  NN  P+F Q P+GV FG DF  SL +EP P  ++    P  VVT+PDS DSSS S  M D +     I+N +  N +E + +EE +  PSSENRL+VYRPP+RT GN+VSR+NAVLPD   ILRNPKT++WMF AR+R ++AKRKLALV W GDP KKL +S  +P+RVIPMPWHDN T  T+ E  DE+     EDM+IEE++
Sbjct:   23 MSRKRTLHPTDAPLAKRYLNGALAAELRGLRISGTPIQSEPSVRNAFGVSFAPSTFYTPNFDSNNVSPTFAQCPNGVAFGDDFVRSLQSEPTPFAQKISEVPQPVVTDPDSSDSSSGSVTMSDVEYEHGQILNDASGNAVEDVTIEECDTEPSSENRLIVYRPPVRTSGNLVSRMNAVLPDTRSILRNPKTNEWMFVARSRPDNAKRKLALVPWEGDPQKKLCDSLGRPTRVIPMPWHDNATSDTIVETIDESTGVSYEDMKIEELS 289

[Close]

BLAST of Ggra7343.t1 vs. uniprot
Match: R7QBA2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBA2_CHOCR)

HSP 1 Score: 120 bits (302), Expect = 3.010e-29
Identity = 94/267 (35.21%), Postives = 133/267 (49.81%), Query Frame = 0

Query:    1 MSRKR----PLQNADTSSTKRYLNGALAAELRGLRISRTTDASQPSQKNAFGVTVPSSPFYSNNFSPNNGV--------PSFTQTPSGVVFGSDFAGSLPAEPLPDLKQNQLDPSHVVTNPDSP-----------DSSSSSTPMDDDDTAPQSIVNVSVDNPMEVLPVEEYEAFPSSENRLVVYRPPIRTRGNVVSRVNAVLPDGSYILRNPKTDDWMFTARNRSESAKRKLALVRWSGDPHKKLRESFHQPSRVIPMPWHDNPTEV 244
            MSRKR    P   A+    KR+LN ALAAEL+ LRI   T+   P Q + FG +V SSPF     SP   V        P+  Q  +GV F +DFA +L  +  P L   +  P   V  P              D+       +  D       ++ ++   + + VE+ +A  S ENRLVVYRPP++T     S ++ +LP+G Y +RNP  D+W+      + + KRKLALV W G   K+  +S  + + VIPMPWH++  EV
Sbjct:    1 MSRKRHSPEPGPTAEGPQVKRHLNSALAAELQSLRIGGRTEPQHPPQ-HFFGASVVSSPFL--YASPRTRVAHDSQLASPNVYQHDNGVTFSADFADTL--DERPKLFSRETTPKSDVVTPSXXXXXXXXXXXXXDNEGYMRDSESVDVKGYEASHMRLETSNDNVIVEDIDAPISEENRLVVYRPPVKTSAAGFSELSGLLPNGQYFVRNPGADEWVLKEVQNNRN-KRKLALVPWRGGT-KRFCDSVQKQAVVIPMPWHESTPEV 260

The following BLAST results are available for this feature:

BLAST of Ggra7343.t1 vs. uniprot

BLAST of Ggra7343.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J1G4	3.090e-90	56.93	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QBA2	3.010e-29	35.21	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..134

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000871_pilon	contig	tig00000871_pilon:832893..833696 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7343.t1	Ggra7343.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000871_pilon 832893..833696 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7343.t1 ID=Ggra7343.t1|Name=Ggra7343.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=268bp
MSRKRPLQNADTSSTKRYLNGALAAELRGLRISRTTDASQPSQKNAFGVT
VPSSPFYSNNFSPNNGVPSFTQTPSGVVFGSDFAGSLPAEPLPDLKQNQL
DPSHVVTNPDSPDSSSSSTPMDDDDTAPQSIVNVSVDNPMEVLPVEEYEA
FPSSENRLVVYRPPIRTRGNVVSRVNAVLPDGSYILRNPKTDDWMFTARN
RSESAKRKLALVRWSGDPHKKLRESFHQPSRVIPMPWHDNPTEVTVAEPP
DEAPMAQEEDMEIEEIA*