Ggra733.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra733.t1
Unique NameGgra733.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length516
Homology
BLAST of Ggra733.t1 vs. uniprot
Match: A0A2V3III2 (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III2_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 2.040e-24
Identity = 70/156 (44.87%), Postives = 94/156 (60.26%), Query Frame = 0
Query:  331 STCFPASAKVRTRNGYKKMEDLRMGEEVVSDRGLERIMLFTHENKWIRAEFVRLYA-GNESLTATGGHMIYVRNG-LRRAREVEVGDMLRKVDG--DARVWKKEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITAH-ALLSVVRLL-GRWR 480
            S CFPASA+V +  G   M+DL++G+ V +  G   +++FTH ++     FV+L+      LT TGGH +Y +NG L  A  V V D+LR  +   D  + K E V   GL+NP TE G+IVVNGF+TS YT +VE   AH ALL  VR + G WR
Sbjct:  372 SACFPASARVYSSRGTVPMQDLKIGDRVKTANGYSDVIMFTHRSRSTIHTFVKLHTQSGRELTVTGGHYVYKQNGDLAAAATVSVSDVLRMANASEDGTIMKIEKVSGIGLYNPQTESGSIVVNGFITSTYTTAVEPKLAHMALLMPVRFMYGVWR 527          
BLAST of Ggra733.t1 vs. uniprot
Match: A0A7S1T873 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T873_9RHOD)

HSP 1 Score: 115 bits (287), Expect = 2.500e-24
Identity = 65/150 (43.33%), Postives = 89/150 (59.33%), Query Frame = 0
Query:  330 SSTCFPASAKVRTRNGYKKMEDLRMGEEVV-SDRGLERIMLFTHENKWIRAEFVRLYAGNESLTATGGHMIYVRNG-LRRAREVEVGDMLRKVDGDAR-VWKKEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITAHALLSVVRLL 476
            SSTCFPAS+ V T +G +KME+L +G+ V+ SD     +  F H        F+ L   N  LT +  H +Y+ +G +R A  V++GD L    G AR V   + + ERGLFNPHT  G++VV+GF  SCYTE+V    AH LL+ +R L
Sbjct:  213 SSTCFPASSTVITLSGLRKMEELELGDSVMTSDGSYSPVFFFGHREPNTWHNFIELETENGKLTLSPSHYVYLLDGTMRTAASVQIGDTLVSASGKAREVTGLKNIRERGLFNPHTSSGHLVVDGFKVSCYTETVNPHVAHVLLAPLRAL 362          
BLAST of Ggra733.t1 vs. uniprot
Match: A0A2V3IU59 (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU59_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 4.430e-21
Identity = 65/150 (43.33%), Postives = 90/150 (60.00%), Query Frame = 0
Query:  331 STCFPASAKVRTRNGYKK-MEDLRMGEEVVSDRG-LERIMLFTHENKWIRAEFVRLYA-GNESLTATGGHMIYVRNGLRRAREVEVGDMLRKVDGD-ARVWKKEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITAHALLSVVRLL 476
            S CFPASA V   +G +  MEDL +G+ V    G   RI+ F+H ++ +   F R +    + LT T  H I+ R GL  A+ V   D L   DG    V  K+ V+ERGLFNPHT  G+IVV+GF+ S YT +V+ ++AHAL++ +RLL
Sbjct:  698 SACFPASASVTQIDGQRMAMEDLTVGDYVFVGYGQYSRIIDFSHADRNVITSFDRFFTESGQILTVTPSHYIHTRRGLLPAKLVTANDFLVLADGGYVSVTAKDRVVERGLFNPHTTQGDIVVDGFLVSTYTSAVKPVSAHALMAPIRLL 847          
BLAST of Ggra733.t1 vs. uniprot
Match: A0A2V3IFE9 (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE9_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 1.260e-20
Identity = 59/146 (40.41%), Postives = 84/146 (57.53%), Query Frame = 0
Query:  331 STCFPASAKVRTRNGY-KKMEDLRMGEEVVSDRGLERIMLFTHENKWIRAEFVRLYA-GNESLTATGGHMIYVRNGLRRAREVEVGDMLRKVDGDARVWKKEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITAHALLSVVR 474
            S CFP+ A V   +G  K+M++L +G+E+        + LFTH  K     FV++    +  L  T GHM+Y    L+ A  V+  D LR VDG  RV +   V+++GLFNP T  G+IVVNG VTS YT +V+   AH +L+ +R
Sbjct:  356 SLCFPSDATVEMIDGSSKRMDELVIGDEIRVGDQFSPVFLFTHNQKETLRSFVQIETESHRKLALTAGHMLYANGILKAAMHVKTDDHLRVVDGTDRVVRVSKVVKKGLFNPQTMHGDIVVNGLVTSTYTTAVDAYMAHTVLAPLR 501          
BLAST of Ggra733.t1 vs. uniprot
Match: A0A2V3IGP9 (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 103 bits (258), Expect = 3.930e-20
Identity = 67/164 (40.85%), Postives = 86/164 (52.44%), Query Frame = 0
Query:  331 STCFPASAKVRTRNG-YKKMEDLRMGEEV-VSDRGLERIMLFTHENKWIRAEFVRLYAGN-ESLTATGGHMIYVRNGLRRAREVEVGDMLRKVDGDARVWKKEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITAHALLSVVRLLGRWRRMARLMGALGS 491
            S CFPA A V   +G +K M+ + +G+ V V+      + +FTH+   I   FVRL A +  SL  T GH +YV   L  A  V VGD +    G   V     V+ RGL+NP T  GNIVVNG   S YT +VE  TAH+LL  +R + R   M   M   GS
Sbjct:  304 SACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIETDAGVVSVSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAVFRLAGMTSAMLDNGS 467          
BLAST of Ggra733.t1 vs. uniprot
Match: R7Q619 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 94.7 bits (234), Expect = 2.520e-18
Identity = 61/171 (35.67%), Postives = 92/171 (53.80%), Query Frame = 0
Query:  331 STCFPASAKVRTRNGYKKM-EDLRMGEEV-VSDRGLERIMLFTHENKWIRAEFVRLYA-GNESLTATGGHMIYVRNGLRRAREVEVGDMLRKVDGD-ARVWKKEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITAHALLSVVRLLGRWRRMARLMGALGSGIEYMA 497
            S CFPA+A V   NG  KM   +++G+ V V       + +FTH+   I+  FV L      +L+ T GH +YV   +  A+ V  GD +   DG  + V +    I RGL+NP T  G+I+VNG + + YT +VE   AHALL+ +R +  +  +   M AL +G + +A
Sbjct:   67 SVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRAV--YSSIGWSMSALDAGADRLA 235          
BLAST of Ggra733.t1 vs. uniprot
Match: A0A2V3J5K7 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K7_9FLOR)

HSP 1 Score: 97.4 bits (241), Expect = 6.320e-18
Identity = 62/169 (36.69%), Postives = 90/169 (53.25%), Query Frame = 0
Query:  333 CFPASAKVRTRNGYK-KMEDLRMGEEV-VSDRGLERIMLFTHENKWIRAEFVRLYAGN-ESLTATGGHMIYVRNGLRRAREVEVGDMLRKVDGDARVWK--KEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITAHALLSVVRLLGRWRRMARLMGALGSGIEYM 496
            CFP SA V   +G   +M  L +G+EV V      RI  F+H +  ++  F  LY  +  +++AT GH IY  N       V+VG  LR + G   V K  ++W+  +GL+NP T  G+I+VNG V S YT+SV    AHA L+ +R +    R+  L   L SG+  +
Sbjct:  324 CFPESASVTLLDGSSARMWQLEVGDEVLVGPNTYSRIFAFSHRDAHVKKLFYTLYTSSGHAISATQGHFIYANNAAIPIERVQVGQSLRTITGSGVVVKVDRQWM--KGLYNPQTVQGDIIVNGVVASTYTKSVVPAVAHAALAPLRAISTVCRVDMLGWLLESGVRQL 490          
BLAST of Ggra733.t1 vs. uniprot
Match: A0A2V3IKI5 (Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI5_9FLOR)

HSP 1 Score: 97.4 bits (241), Expect = 1.260e-17
Identity = 58/158 (36.71%), Postives = 89/158 (56.33%), Query Frame = 0
Query:  333 CFPASAKVRTRNGYKK-MEDLRMGEEVVSDRG-LERIMLFTHENKWIRAEFVRLYAGN-ESLTATGGHMIYVRNGLRRAREVEVGDMLRKVDGDAR-VWKKEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITAHALLSVVRLLGRWRRMARLM 486
            CFPASA V  R+G +K M++L++G+ ++   G    + LFTH    +   FV+L   +  ++  T GH +Y+   L  A     GD +    G+   V K   V+++GLFNP T  GNIVV+G V+S YT ++  + AH LL+ +R+L R   M  L+
Sbjct:  662 CFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGSGETEMVTKVSTVVDKGLFNPQTIHGNIVVDGVVSSTYTHTIAPMMAHGLLAPLRVLYRCLGMLALV 819          
BLAST of Ggra733.t1 vs. uniprot
Match: desert hedgehog protein B-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D929E (desert hedgehog protein B-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D929E)

HSP 1 Score: 90.5 bits (223), Expect = 2.610e-17
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 0
Query:  333 CFPASAKVRTRNG-YKKMEDLRMGEEVVSDRGLER------IMLFTHENKWIRAEFVRLYAGNESLT---ATGGHMIYVRNGLRRAREVEVGDMLR--KVDGDARVWKKEWVIERGLFNPHTEGGNIVVNGFVTSCYTESVETITA 466
            CFPA A V+  +G    M  L++G+ V+     +R      I LFTH +  I + FVR++   +  T   A+ GH +YV + L  A  ++VGDMLR   +DG +RV + E+V  +GLFNP T  G+IVVNG + S +T +V+   A
Sbjct:   35 CFPAGAIVQLHSGALVPMSQLKLGDRVLVSATQKREDAFSGIFLFTHRDAEITSWFVRIHHSQDLGTPFMASPGHYLYVNDVLTAAEAIKVGDMLRVAHMDGTSRVSRVEYVTAKGLFNPQTAHGDIVVNGVLASTFTTTVKPSVA 180          
BLAST of Ggra733.t1 vs. uniprot
Match: A0A5J4Z6M3 (Serine protease 56 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6M3_PORPP)

HSP 1 Score: 95.1 bits (235), Expect = 6.050e-17
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 0
Query:  330 SSTCFPASAKVRTRNGYKK-MEDLRMGEEV-VSDRGLERIMLFTHEN-KWIRAEFVRLYAGNES---LTATGGHMIYVRNGLRRAREVEVGDMLRKVDGDARVWKKEWVIER-----GLFNPHTEGGNIVVNGFVTSCYTESVETITAHALLSVVRLLGRWR 480
            ++ CFPA A V   +G +K M+ + +G+ V VS      ++ + H +   +  +FVR+   + S   L  +  H++Y  N L  AR V   D +    G+   WK+   +ER     GLFNPHT  G+IVV+G+VTSCYTE +  +T HA+L+  RLL  WR
Sbjct:  511 NAACFPAFASVELVDGSRKRMDQVILGDVVRVSATEFSPVVFWGHRDPSRVHNDFVRIKVEDTSEAVLVVSADHLVYANNALILARAVNTDDFVMTASGE---WKRVAQVERRVRGRGLFNPHTAKGDIVVDGYVTSCYTEWLHAVTGHAMLAFARLL--WR 667          
The following BLAST results are available for this feature:
BLAST of Ggra733.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3III22.040e-2444.87Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A7S1T8732.500e-2443.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IU594.430e-2143.33Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A2V3IFE91.260e-2040.41Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3IGP93.930e-2040.85Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
R7Q6192.520e-1835.67HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3J5K76.320e-1836.69Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKI51.260e-1736.71Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis c... [more]
desert hedgehog protein B-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D929E2.610e-1739.04desert hedgehog protein B-like n=1 Tax=Mercenaria ... [more]
A0A5J4Z6M36.050e-1737.04Serine protease 56 n=1 Tax=Porphyridium purpureum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 331..421
e-value: 1.6E-8
score: 44.4
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 331..482
e-value: 1.6E-18
score: 67.0
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 333..458
e-value: 6.8E-26
score: 93.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..336
NoneNo IPR availablePANTHERPTHR46706FAMILY NOT NAMEDcoord: 250..478
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..515
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableCDDcd00081Hintcoord: 333..456
e-value: 1.12862E-12
score: 63.4422
IPR006141Intein N-terminal splicing regionPROSITEPS50817INTEIN_N_TERcoord: 333..401
score: 8.941308
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 333..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000204_piloncontigtig00000204_pilon:43936..46671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra733.t1Ggra733.t1Gracilaria gracilis GNS1m malemRNAtig00000204_pilon 43936..46671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra733.t1 ID=Ggra733.t1|Name=Ggra733.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=516bp
MSVQFSVLCFMLVLLLAGNQAVPKPTTFSGPLQLENTSVRAFTPSEFTAG
YELMVQYRHGSVPSCPHRIQYTGTPTEEDSQLLLKHTDMKISESDTLNPI
NCTDNGVQRLALSTKLRGQTLADFVEQVDKSLDKSILYKSVAQQLSGARY
YVSVEDSVRVCGQGWFSSAETYFFFDESKLVQLQVVKKVIQDDPVVITLP
LIGNIRYMVVAREGTTCIYRVESDVQSIIRNSPRPSDSPSVTPSPSPSTS
PIPPMPSPSASVTTSASAAPSPSASMVPTPSSSSVASPSPSGSSSVLPAP
SSSASISPSGNNDENNIDGDDRGENSVDGSSTCFPASAKVRTRNGYKKME
DLRMGEEVVSDRGLERIMLFTHENKWIRAEFVRLYAGNESLTATGGHMIY
VRNGLRRAREVEVGDMLRKVDGDARVWKKEWVIERGLFNPHTEGGNIVVN
GFVTSCYTESVETITAHALLSVVRLLGRWRRMARLMGALGSGIEYMARFC
GTVARTAGAASSALA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR006141Intein_N
IPR036844Hint_dom_sf