Ggra7324.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7324.t1
Unique NameGgra7324.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length513
Homology
BLAST of Ggra7324.t1 vs. uniprot
Match: A0A2V3J1F2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1F2_9FLOR)

HSP 1 Score: 612 bits (1577), Expect = 1.830e-214
Identity = 347/515 (67.38%), Postives = 391/515 (75.92%), Query Frame = 0
Query:    1 MDAIDADIAWEECIPDLPLDTNNLPPLNALSTDSTHNLDLLDLLSFESDKTPDPIATPGRLPSVESLSTSTDPLSLAPEPFPRPQETLSQCTEHSTITPSVTSPPHMVHLASDQSTVGSRISSPSHTTSEEIPSPQQSAPASPQPTKRYTSNKQRPRRQKRSARKKETESNSNDSLVLELTTRLASAGAETAALRKRVASLTQENRSLRAALDHANARLVAVAQAAAAAPPTALQQPVVVGLAQMSQEVAGRISGALTINDVEEAPKKKRKRVTGAATTMACVMFMWGAFVGTPGLLKAATKVFGGEDSNLPAVWKGGSQAASSVPAVPVTRMQESWQPNCMTVLQELPSKSTDDVVEP-MDIDSIKVKQETVLVDEKIDKGE--KVPAEKMFVDMRDEDAAKVVALADVRTRSQPQYSYVLCRDAKAAIDNIRACSESKKNGEPCGPPHTISLILPASTAGMEDENSTDSLPALAEVQCNIMSIARIPVDSMNDGSSYGRVIATMPQSGTVIRG 512
            MD ID +IAWEECIPDLPLDTNNLPPLNALS    ++ DLLDLL+F+SDK  D + TPG+LPS ESL+TST PL+L  + F                   + SP  +V L SD STVGSRISSPSHT+ E++PSPQQSAPAS                               DSLVLELTTRL SAGAE  ALRKRVASLTQENRSLRAALDHANARLVAVAQAA        Q P+VVGLAQMSQEVAGRISGALT+NDVEEAPKKKRKRVTGAATTMACVMFMWGAFVGTPGLLKAA+ VFGG++SNLPA+WKG S A S+VPAVP   MQE WQP+CM+VL+ELP KS++D  E     D    K E ++V+EK  K +     AEKMFVDMRDEDAAKVVALAD R ++QPQYSYVLCRDA+AAI +I+ACSESKK GEPCGPPHTISLILPA+TAGMEDEN TDS+PALAEVQC+IMS+ARIP  S+N+ +SYGRVIAT+PQSGTVI G
Sbjct:    1 MDKIDVNIAWEECIPDLPLDTNNLPPLNALSNGLPNHPDLLDLLNFDSDKNIDSVTTPGKLPSPESLTTSTAPLNLTTDSFXXXXXXXXXXXXXXXXXXXLLSPQFIVELPSDNSTVGSRISSPSHTSFEQLPSPQQSAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDSLVLELTTRLTSAGAEATALRKRVASLTQENRSLRAALDHANARLVAVAQAAXXXXXX-XQPPIVVGLAQMSQEVAGRISGALTVNDVEEAPKKKRKRVTGAATTMACVMFMWGAFVGTPGLLKAASNVFGGDNSNLPAIWKGNSGAPSAVPAVPAPHMQEGWQPSCMSVLKELPDKSSEDDEETNQHQDGGLAKDEPLVVEEKPTKMDIDVSSAEKMFVDMRDEDAAKVVALADFRGQAQPQYSYVLCRDAQAAIGSIKACSESKKRGEPCGPPHTISLILPAATAGMEDENDTDSMPALAEVQCSIMSVARIPTPSVNNDNSYGRVIATVPQSGTVIHG 514          
BLAST of Ggra7324.t1 vs. uniprot
Match: R7QEB9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEB9_CHOCR)

HSP 1 Score: 217 bits (552), Expect = 9.000e-63
Identity = 138/295 (46.78%), Postives = 176/295 (59.66%), Query Frame = 0
Query:  235 QQPVVVGLAQMSQEVAGRISGALTINDVEEAP---------KKKRKRVTGAATTMACVMFMWGAFVGTPGLLKAATKVFGGEDSNLPAVWKGGSQAASSVPAVPVTRMQE-----SWQPNCMTVLQELPSKSTDDVVEPMDIDSIKVKQ-----ETVLVDEKIDKGEKVPAEKMFVDMRDEDAAKVVALADVRTRSQPQYSYVLCRDAKAAIDNIRACSESKKNGEPCGPPHTISLILPASTAGMEDE-NSTD-SLPALAEVQCNIMSIARIP-----VDSMNDGSS-YGRVIAT 502
            +QPV++GL Q+  +VA R+   LT++  + AP         +KKRKR+ GAATTMACVMFMWGAFVGTPGLLK +       D NLPAVW       +    +P  R        SWQPNCM VL++LP    D  +EP   D   +       +T   + + DK     A KMFVDM DE+AA VVA AD      P+YSYVL RDA AA+D+I++C    ++G  CG PH+ISLILPAS AG+E++ N T      LAEVQC +MS+ARIP     V+    G+S YG+VIAT
Sbjct:   26 RQPVMLGLTQVPSDVASRLGSVLTVSSAD-APSVSTDDPRERKKRKRMAGAATTMACVMFMWGAFVGTPGLLKGSASYR--SDGNLPAVWTSTPTDTAVARVMPNRRPHSAEPDHSWQPNCMRVLEQLPHGKED--LEPSTKDEPIIADPATDLDTQRQEPREDKDIDTEANKMFVDMADENAASVVARADDTEAVIPEYSYVLIRDAVAAMDSIKSCRHRLRHGNHCGQPHSISLILPASAAGLEEDVNDTQRGSIQLAEVQCTVMSVARIPSNAATVNKATPGNSNYGKVIAT 315          
The following BLAST results are available for this feature:
BLAST of Ggra7324.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1F21.830e-21467.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEB99.000e-6346.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:772754..774292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7324.t1Ggra7324.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 772754..774292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7324.t1 ID=Ggra7324.t1|Name=Ggra7324.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=513bp
MDAIDADIAWEECIPDLPLDTNNLPPLNALSTDSTHNLDLLDLLSFESDK
TPDPIATPGRLPSVESLSTSTDPLSLAPEPFPRPQETLSQCTEHSTITPS
VTSPPHMVHLASDQSTVGSRISSPSHTTSEEIPSPQQSAPASPQPTKRYT
SNKQRPRRQKRSARKKETESNSNDSLVLELTTRLASAGAETAALRKRVAS
LTQENRSLRAALDHANARLVAVAQAAAAAPPTALQQPVVVGLAQMSQEVA
GRISGALTINDVEEAPKKKRKRVTGAATTMACVMFMWGAFVGTPGLLKAA
TKVFGGEDSNLPAVWKGGSQAASSVPAVPVTRMQESWQPNCMTVLQELPS
KSTDDVVEPMDIDSIKVKQETVLVDEKIDKGEKVPAEKMFVDMRDEDAAK
VVALADVRTRSQPQYSYVLCRDAKAAIDNIRACSESKKNGEPCGPPHTIS
LILPASTAGMEDENSTDSLPALAEVQCNIMSIARIPVDSMNDGSSYGRVI
ATMPQSGTVIRG*
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