Ggra7304.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7304.t1
Unique NameGgra7304.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length198
Homology
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BLAST of Ggra7304.t1 vs. uniprot
Match: A0A2V3J176 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J176_9FLOR)

HSP 1 Score: 184 bits (467), Expect = 2.800e-56
Identity = 78/106 (73.58%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:   85 KKCKVIVPGIPTTVLNVQCLCPGVASHALLIRPETPTIGGCLEVCFENDPMIQQACDAAFDLPGGGPPRYFTFNDAVLRGGQKRCCEDVCGSVFSVSRQGTRFCDE 190
            KKC V  PGIPT++LNVQCLCPGV SHA+ IRPETPTIGGC+E C+E+D +IQ+ACD A+ LPGGGPPRYF FNDAVL+GGQ+RCCE+VCG  F ++R GTRFCDE
Sbjct:   52 KKCLVYTPGIPTSILNVQCLCPGVQSHAIQIRPETPTIGGCMERCYEHDELIQKACDDAYYLPGGGPPRYFAFNDAVLKGGQRRCCEEVCGGKFRITRPGTRFCDE 157
The following BLAST results are available for this feature:
BLAST of Ggra7304.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1762.800e-5673.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:680328..680921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7304.t1Ggra7304.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 680328..680921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7304.t1 ID=Ggra7304.t1|Name=Ggra7304.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=198bp
MAPRTLFFLALIFSAALQNAQASRWDEYYNSDFYRPSPSASASASPTPST
SPSASSTPSATPTPSMSATPSMSPTPSTSPPPPPKKCKVIVPGIPTTVLN
VQCLCPGVASHALLIRPETPTIGGCLEVCFENDPMIQQACDAAFDLPGGG
PPRYFTFNDAVLRGGQKRCCEDVCGSVFSVSRQGTRFCDEPAGLYPY*
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