Ggra7304.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7304.t1
Unique NameGgra7304.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length198
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:680328..680921 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7304Ggra7304Gracilaria gracilis GNS1m malegenetig00000871_pilon 680328..680921 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7304.t1.start1Ggra7304.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000871_pilon 680328..680330 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7304.t1.CDS1Ggra7304.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000871_pilon 680328..680921 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7304.t1.exon1Ggra7304.t1.exon1Gracilaria gracilis GNS1m maleexontig00000871_pilon 680328..680921 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7304.t1.stop1Ggra7304.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000871_pilon 680919..680921 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7304.t1Ggra7304.t1Gracilaria gracilis GNS1m malepolypeptidetig00000871_pilon 680328..680921 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7304.t1 ID=Ggra7304.t1|Name=Ggra7304.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=198bp
MAPRTLFFLALIFSAALQNAQASRWDEYYNSDFYRPSPSASASASPTPST
SPSASSTPSATPTPSMSATPSMSPTPSTSPPPPPKKCKVIVPGIPTTVLN
VQCLCPGVASHALLIRPETPTIGGCLEVCFENDPMIQQACDAAFDLPGGG
PPRYFTFNDAVLRGGQKRCCEDVCGSVFSVSRQGTRFCDEPAGLYPY*
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spliced messenger RNA

>Ggra7304.t1 ID=Ggra7304.t1|Name=Ggra7304.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=594bp|location=Sequence derived from alignment at tig00000871_pilon:680328..680921+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTCCACGAACACTTTTCTTCCTCGCGCTAATTTTCTCCGCTGCGCT
TCAAAACGCGCAGGCTTCCCGCTGGGACGAGTACTACAACAGCGACTTTT
ATCGTCCATCTCCTTCCGCTTCTGCGAGTGCTTCACCCACCCCATCTACC
TCACCGTCGGCCTCTTCCACCCCATCCGCGACACCCACGCCCTCCATGTC
GGCCACTCCCTCCATGTCGCCCACCCCAAGCACGTCGCCGCCACCGCCGC
CGAAGAAATGCAAGGTCATCGTTCCCGGAATCCCCACAACTGTGCTCAAT
GTCCAATGCCTTTGCCCTGGAGTTGCCAGCCATGCGCTTCTTATTCGCCC
GGAGACGCCCACTATTGGAGGTTGTCTTGAGGTTTGCTTCGAGAATGATC
CCATGATTCAACAGGCTTGTGATGCTGCGTTCGATCTGCCCGGAGGTGGA
CCGCCGAGATACTTCACTTTCAATGACGCCGTTCTCAGGGGTGGTCAGAA
GCGTTGTTGTGAGGATGTTTGCGGAAGTGTATTCTCTGTCTCTCGCCAAG
GAACGCGCTTCTGTGATGAGCCGGCTGGACTGTACCCGTATTAA
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protein sequence of Ggra7304.t1

>Ggra7304.t1 ID=Ggra7304.t1|Name=Ggra7304.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=198bp
MAPRTLFFLALIFSAALQNAQASRWDEYYNSDFYRPSPSASASASPTPST
SPSASSTPSATPTPSMSATPSMSPTPSTSPPPPPKKCKVIVPGIPTTVLN
VQCLCPGVASHALLIRPETPTIGGCLEVCFENDPMIQQACDAAFDLPGGG
PPRYFTFNDAVLRGGQKRCCEDVCGSVFSVSRQGTRFCDEPAGLYPY*
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mRNA from alignment at tig00000871_pilon:680328..680921+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7304.t1 ID=Ggra7304.t1|Name=Ggra7304.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=594bp|location=Sequence derived from alignment at tig00000871_pilon:680328..680921+ (Gracilaria gracilis GNS1m male)
ATGGCTCCACGAACACTTTTCTTCCTCGCGCTAATTTTCTCCGCTGCGCT
TCAAAACGCGCAGGCTTCCCGCTGGGACGAGTACTACAACAGCGACTTTT
ATCGTCCATCTCCTTCCGCTTCTGCGAGTGCTTCACCCACCCCATCTACC
TCACCGTCGGCCTCTTCCACCCCATCCGCGACACCCACGCCCTCCATGTC
GGCCACTCCCTCCATGTCGCCCACCCCAAGCACGTCGCCGCCACCGCCGC
CGAAGAAATGCAAGGTCATCGTTCCCGGAATCCCCACAACTGTGCTCAAT
GTCCAATGCCTTTGCCCTGGAGTTGCCAGCCATGCGCTTCTTATTCGCCC
GGAGACGCCCACTATTGGAGGTTGTCTTGAGGTTTGCTTCGAGAATGATC
CCATGATTCAACAGGCTTGTGATGCTGCGTTCGATCTGCCCGGAGGTGGA
CCGCCGAGATACTTCACTTTCAATGACGCCGTTCTCAGGGGTGGTCAGAA
GCGTTGTTGTGAGGATGTTTGCGGAAGTGTATTCTCTGTCTCTCGCCAAG
GAACGCGCTTCTGTGATGAGCCGGCTGGACTGTACCCGTATTAA
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Coding sequence (CDS) from alignment at tig00000871_pilon:680328..680921+

>Ggra7304.t1 ID=Ggra7304.t1|Name=Ggra7304.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=594bp|location=Sequence derived from alignment at tig00000871_pilon:680328..680921+ (Gracilaria gracilis GNS1m male)
ATGGCTCCACGAACACTTTTCTTCCTCGCGCTAATTTTCTCCGCTGCGCT
TCAAAACGCGCAGGCTTCCCGCTGGGACGAGTACTACAACAGCGACTTTT
ATCGTCCATCTCCTTCCGCTTCTGCGAGTGCTTCACCCACCCCATCTACC
TCACCGTCGGCCTCTTCCACCCCATCCGCGACACCCACGCCCTCCATGTC
GGCCACTCCCTCCATGTCGCCCACCCCAAGCACGTCGCCGCCACCGCCGC
CGAAGAAATGCAAGGTCATCGTTCCCGGAATCCCCACAACTGTGCTCAAT
GTCCAATGCCTTTGCCCTGGAGTTGCCAGCCATGCGCTTCTTATTCGCCC
GGAGACGCCCACTATTGGAGGTTGTCTTGAGGTTTGCTTCGAGAATGATC
CCATGATTCAACAGGCTTGTGATGCTGCGTTCGATCTGCCCGGAGGTGGA
CCGCCGAGATACTTCACTTTCAATGACGCCGTTCTCAGGGGTGGTCAGAA
GCGTTGTTGTGAGGATGTTTGCGGAAGTGTATTCTCTGTCTCTCGCCAAG
GAACGCGCTTCTGTGATGAGCCGGCTGGACTGTACCCGTATTAA
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