Ggra7251.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra7251.t1 vs. uniprot
Match: R7QE19 (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE19_CHOCR) HSP 1 Score: 169 bits (427), Expect = 1.430e-39 Identity = 175/667 (26.24%), Postives = 282/667 (42.28%), Query Frame = 0
Query: 138 PNLTGNQIVRELRNDCTPEQLFQHKLTQNLSLFSSLARLINRVGGNLSINSN-RTLPPLAHTIYINHEDINTAIKLLDDSQAILPPQAQPPVENPISFGLVDPLFTGTIPPTTNSPPEEPAHFNTIHIRTHRQNSQDHPPNRNESKPNNSKLTHSVAMRFKDKSSKVSGAIGESWEEFFTEYKLALAHYDVPSDRQISFMHHILRDKAKRFFLQKIFDRVDSLDMASDLMENQYNSTARKKRIENQLNAIRFESYEKNEGSSTKALETLEADISKLAPQGPANCYLD-------------------------TEQLNFQEFYTQLECAIQRENEEKIA------RKKTNPFGSSSKSELFDTN----YNSGP------------PARYGRYKHSRKNYRNNYRFRKNVI--CFGCGEEGHVIRNCKNPQDLSTVASRKVQHLQCSGKLNSQNKALKHVLYELRTQTQDGSEDESDFEDPNTFFETKDVP--DDALEANDEGDSDSDEIIDEQPNPFKSCYMQFDIDNSTSPLDFGQTRKDALKRKLHSVPKGTAHKLRRYLKRKFTCFLVSRDDLEFSCNQEFIGGCLDIGAQRSVIGHKQAKAYCTKYGIEMKKRKSNI--LFRLEDNIFNSIAQIPIRIFAPQGRIIKLTVDVIDCDIPFLLGLD 750
P+LTG + R + + P LF+ ++ ++ L ++ G NL+ +S+ R + LAH +Y ED AI++ + A Q +P + S G P +P T+ S F+T K+ H+VAMR K+K K SG +GESW E+ +Y Y++ +++ F+H++LR AKR++L KI S A ++E +YNS R+ R++N LN++R + + AL I + QGP + D T QL FQ+ Y++LE A+Q + E KIA + S + + T YN+ P P GR S + +F + CF CG H++R+C P + S A+RK+++ + K +++ A+ HVL +L Q GS E D E+ ET D+ + L ND D D+D++ P D G DA+ +L S+ + + F G C+D AQ+SV+G +QAKAYC+ + + SN +F + + + +R+ I L+V+V+D ++PFLLGLD
Sbjct: 61 PDLTGIHLKRTVADMFPPASLFRQEICDLPAVHIELRNFLDAKGANLAQHSSHRVVMTLAHGLYEETEDTQAAIEMAREIIAAGRRQ-RPHAPSSSSHGEQSP-----VPRTSGS-------FSTP----------------------TEKVAHNVAMRMKEKEKKFSGDLGESWMEYVDDYLQISRDYNLSPPQRLQFLHNLLRGDAKRYYLDKIDGYATSFQQAIQMLEEEYNSPVRQTRVKNYLNSLRVTVFAAEGKEMSAALALTYKSIIIFSRQGPRSHQGDAHKVEFLRNAVVGMPWSSEPLSRVATHQLTFQQLYSELEAALQLDKESKIAIIRDHAQLNQRSVSHDSWAGILYTGQGRYYNNSPYPRERDQTSTRQPRFGGRAFRSPSTTKQKVKFNPLTVSGCFNCGGN-HLLRDCTLPLNTSRAATRKMEYY--AKKADTKPIAVHHVLADLCKQLDIGSVPEDDSEEET---ETTDITIFESILSGNDTTD---------------------DVDSTEHPTDSGC---DAINH----------------------VYLTSKS-WNVTVSDPFHGICIDSAAQKSVVGVEQAKAYCSLFNVPYSPSTSNAKNVFSFGTHKHLGLGLLTVRVPIAPTHFISLSVEVVDTNVPFLLGLD 639
BLAST of Ggra7251.t1 vs. uniprot
Match: W0GEX7 (Polyprotein n=1 Tax=Chondrus crispus TaxID=2769 RepID=W0GEX7_CHOCR) HSP 1 Score: 92.8 bits (229), Expect = 1.530e-15 Identity = 133/518 (25.68%), Postives = 215/518 (41.51%), Query Frame = 0
Query: 292 VAMRFKDKSSKVSGAIGESWEEFFTEYKLALAHYDVPSDRQISFMHHILRDKAKRFFLQKI------FDRVDSLDMASDLMENQYNSTARKKRIENQLNAIRFESYEKNEGSSTKALETLEADISKLAPQGPANCYLDTEQ-----------------------LNFQEFYTQL-------ECAIQRENEEKIARKKTNPFGSSSKSELFDTNYN---SGPPARYGRYKHSRKNYRNNYRFRKNVICFGCGEEGHVIRNCKN-PQDLSTVASRKVQHLQCSGKLNSQNKALKHVLYELRTQTQD-------------GSEDESDFEDPNTFFETKDVPDDALEANDEGDSDSDEIIDEQPNPFKSCYM--QFDIDNSTSPLDFGQTRKDALKRKLHSVP-KGTAHKLRRYLKRKFTCFLVSRDDLEFSCNQEFIGGCLDIGAQRSVIGHKQAKAYCTKYGIEMKKRKSNILFRLEDNIFNSIAQIPIRIFAPQGRIIKLTVDVIDCDIPFLLGLDFLD 753
+A RFKD++ K +G GE+WE+ ++ Y + VP + + IL +AK ++ +K+ F D ++ +++ + A++ IE+ L+++ + +GS L + +I K P D +Q ++F Y L E A++ +E R K S + LF Y S P +H+ K + +FR N C+GCG+ G+ +C + +D T + + L+ ++ + L V+ EL+ Q D GS++E+ +D E + EG +D +E DE+ F + DI ++T+ + T R L +P T H S DD + F G CLD GA SV G QAKAY + G + K +KSN +FR N S+ I IRI P ++L VDV++ DIP L+GLD LD
Sbjct: 267 LATRFKDRADKYAGNEGENWEDVYSSYINCADQWGVPEGAALRNIETILHGEAKTYYKRKVQANPNYFQTCDEVNKF--ILDTFHGREAQEATIEH-LDSLSMYEQAQRQGSLVAGLRAVRDEIIKHVNLVPKGRQTDLDQKRWLKNAVRQYRWARPTTARAHDMDFARMYATLRSQAIEEERAMENRSERGRYRSKVGDK-SLGRRILFGDMYGRDISNP-------RHTPKP--GDGQFRGN--CYGCGKRGYRRADCPDCKRDGRTFEPDRKKALKAIHEVTEMKEVLL-VMGELQDQYGDRFEDLLGMARGESGSQEEAGEQDIGLAIED--------DQRHEG-TDGEEHDDEKEGGFIEQFHIHMTDIISTTNDI---ATSTHQQSRDLDEIPIHETEH---------------SDDD------KTFRGACLDTGATTSVCGLNQAKAYASFAGFKYKPKKSNKVFRFGGNRARSMGTIVIRIPIPGNLYVELKVDVVEHDIPLLIGLDALD 735
BLAST of Ggra7251.t1 vs. uniprot
Match: R7QHR7 (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHR7_CHOCR) HSP 1 Score: 77.8 bits (190), Expect = 2.260e-11 Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 0
Query: 665 NQEFIGGCLDIGAQRSVIGHKQAKAYCTKYGIEMKKRKSNILFRLEDNIFNSIAQIPIRI-FAPQGRIIKLTVDVIDCDIPFLLGLDFLD 753
+ F G CLD GA++SVIG+ QAKAYC +G M + S ++ D I +S+ + IR+ FAP G + L+VDV+ DIP L+ LD LD
Sbjct: 70 SSRFCGACLDTGAEKSVIGYAQAKAYCKTFGTPMHLQPSPFFYKFGDGIRSSLGTMEIRLPFAP-GYFVPLSVDVVSADIPLLIALDTLD 158
BLAST of Ggra7251.t1 vs. uniprot
Match: A0A1X6P0Y0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0Y0_PORUM) HSP 1 Score: 61.6 bits (148), Expect = 3.010e-7 Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 0
Query: 666 QEFIGGCLDIGAQRSVIGHKQAKAYCTKYGIEMKKRK-SNILFRLEDNIFNSIAQIPIRIFAPQGRIIKLTVDVIDCDIPFLLGLDFLD 753
+EF G LD GA+R+VIGH+QA AY GI+M+ K S +FR + S+ + +++ + + VDV+ ++P LLGLD +D
Sbjct: 13 KEFQGAFLDTGAERTVIGHRQAAAYARFAGIKMRLDKTSRAVFRFGGPGYPSLGTLHVKVPYANNLFLPMEVDVVALNVPILLGLDTMD 101
BLAST of Ggra7251.t1 vs. uniprot
Match: R7Q465 (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q465_CHOCR) HSP 1 Score: 62.8 bits (151), Expect = 2.410e-6 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 0
Query: 667 EFIGGCLDIGAQRSVIGHKQAKAYCTKYGIEMKKRKSNI--LFRLEDNIFNSIAQIPIRIFAPQGRIIKLTVDVIDCDIPFLLGLDFLD 753
+F+G C+D GAQRSVIG QA+AY GI +S +++ + + + + IRI + I V V+D D+P LLGL+FLD
Sbjct: 105 DFLGACIDTGAQRSVIGKPQAEAYYIFMGIPFCLEQSGHPRVYKFGAHRYKGLGSVFIRIPVDSNQFIFTEVQVVDLDVPLLLGLEFLD 193
BLAST of Ggra7251.t1 vs. uniprot
Match: R7QGK3 (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGK3_CHOCR) HSP 1 Score: 60.8 bits (146), Expect = 9.240e-6 Identity = 32/85 (37.65%), Postives = 49/85 (57.65%), Query Frame = 0
Query: 668 FIGGCLDIGAQRSVIGHKQAKAYCTKYGIEMKKRKSNI--LFRLEDNIFNSIAQIPIRIFAPQGRIIKLTVDVIDCDIPFLLGLD 750
F G C+D AQRSV+G +QAKAYC+ + + SN +F + + + +R+ I L+V+V+D ++PFLLGLD
Sbjct: 93 FHGICIDSAAQRSVVGVEQAKAYCSLFNVPFSPSASNARNIFSFGTHKHVGLGLLTVRVPIAPTHFISLSVEVVDTNVPFLLGLD 177 The following BLAST results are available for this feature:
BLAST of Ggra7251.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra7251.t1 ID=Ggra7251.t1|Name=Ggra7251.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=754bpback to top |