Ggra7114.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7114.t1
Unique NameGgra7114.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length534
Homology
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BLAST of Ggra7114.t1 vs. uniprot
Match: A0A2V3J391 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J391_9FLOR)

HSP 1 Score: 150 bits (379), Expect = 7.850e-36
Identity = 73/138 (52.90%), Postives = 96/138 (69.57%), Query Frame = 0 
Query:  391 ETCSTCSPQACICENKRFAKKRAKETTPSAIGFKLRRGSKIHYTTESGVFGLIKFGIRACSDGILVGELTIFPRSATGPRRTSGQKELYIVLRGFLILEVEDSTLHLREGDDVEFEDNTVFQFRNPHLRSTDLICLLL 528
            + CS CS + C C        R   T  S   F +RRGS++ Y TE  VFG++K GIR   DGI++GELT+FP S+TG R+T+G +E Y VL G+L+L+VED+TLHLR GD+VEF ++TVFQ RNP LR+TDL C L+
Sbjct:  400 KNCSLCSCETCTCIE------RETNTEKSRRAFTVRRGSQMTYNTERDVFGMMKLGIRMSEDGIMLGELTLFPMSSTGRRKTTGHREYYFVLSGYLVLDVEDTTLHLRRGDEVEFCEDTVFQLRNPCLRATDLFCFLV 531
The following BLAST results are available for this feature:
BLAST of Ggra7114.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3917.850e-3652.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 438..528
e-value: 1.5E-6
score: 29.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..343
NoneNo IPR availableCDDcd02208cupin_RmlC-likecoord: 456..525
e-value: 0.00234165
score: 35.151
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 451..527

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:556740..558341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7114.t1Ggra7114.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 556740..558341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7114.t1 ID=Ggra7114.t1|Name=Ggra7114.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=534bp
MTKSVPRRRSTRTRRSPPQWWKEGSNRPKSKPSSVAKIERSSLSEEEERP
RKRRPPRLPENAQPQKSRCQETFQSDWNGVEEDGEGEVSHQVIGDTCSTV
IFHSTETYKSHGKPQSDFLKSSEHPVPDEKITNTGETLKSDIEQVTNTFE
STAYHVQFTSTTEVETAAQTDKIHDEARLVSGNINTQKDVELTRTRMEKT
CSFQVSSGLQRGGRGETIFNTFIQDGMCSSSPPRASGSNASKDAMKAVGE
KKTGAIGKRLDSKDCLEACPEGRSTPPKASVNQNLSPQEIGARVVARISE
RLLYGETLNNENCRSPTRQSKPLSNNTSFTSAKDVRKGTDNSSVQSSRII
NAINGVAVRQSTEHTSLHGSERYFGVEEMMPAVSQEFRMPETCSTCSPQA
CICENKRFAKKRAKETTPSAIGFKLRRGSKIHYTTESGVFGLIKFGIRAC
SDGILVGELTIFPRSATGPRRTSGQKELYIVLRGFLILEVEDSTLHLREG
DDVEFEDNTVFQFRNPHLRSTDLICLLLPTEYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf