Ggra7105.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7105.t1
Unique NameGgra7105.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length167
Homology
BLAST of Ggra7105.t1 vs. uniprot
Match: A0A2V3J292 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J292_9FLOR)

HSP 1 Score: 226 bits (576), Expect = 2.570e-73
Identity = 119/169 (70.41%), Postives = 145/169 (85.80%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVYALRFAVLRGIPRFYQIVWPILLILYALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKMCSATSPFSGDG---EEEQIDEYAAMSRKERRKADRKAKRQR 166
            MANSSAKKLYKAN K+L  LR  ++ SNL++ L F + R IPRF+QIV+PILL++YALPYMFLRSAAQPTFD+YG+IVDAG+D+S  G+LEYCHDLL+LT+ VQVG+LF+KWMLLV+L++P F V+KMC+  SPFS  G   EEE++DEYA MSRKERRKADRKAKRQR
Sbjct:    1 MANSSAKKLYKANAKRLSLLRTAIIFSNLLHVLPFVIKRSIPRFHQIVFPILLMVYALPYMFLRSAAQPTFDAYGSIVDAGSDISGAGLLEYCHDLLFLTMVVQVGMLFTKWMLLVFLVVPVFTVYKMCA--SPFSSSGTQGEEEELDEYAFMSRKERRKADRKAKRQR 167          
BLAST of Ggra7105.t1 vs. uniprot
Match: R7Q2R0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2R0_CHOCR)

HSP 1 Score: 117 bits (292), Expect = 3.350e-30
Identity = 67/164 (40.85%), Postives = 107/164 (65.24%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVY-ALRFAVLRG-IPRFYQIVWPILLILYALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKMCSAT-SPFSGDGEEEQ-IDEYAAMSRKERRKADR 160
            MANSSAKK  K+N+ +L  LR +++A+NL+Y  +R  + R  +  F+   W  LL+    P+  L +AA+P +   G + D G D+S PGVLEY HD +Y+++   + +L +KW LL++ ++P + ++  C+A  +P   D EE+Q + ++AAMSRKERRKA+R
Sbjct:    1 MANSSAKKRVKSNSARLTRLRLLIVAANLIYIVVRLLLPRSAVTTFHLAAWFFLLLTTLAPFYLLWTAARPRYFDDGQLCDGGEDISAPGVLEYAHDTIYISLLTLLALLLTKWALLIFAVLPTYAIYASCAARKAPNEIDAEEDQAVSQFAAMSRKERRKAER 164          
BLAST of Ggra7105.t1 vs. uniprot
Match: transmembrane protein 208-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C893A (transmembrane protein 208-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C893A)

HSP 1 Score: 81.3 bits (199), Expect = 2.910e-16
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVYALRFAVLRGIPRFYQIVWP------ILLILYALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKMCSATSPFSGDGEEEQIDEYAAMSRKERRKADRKAKR 164
            MAN  AKK  + N + +  LR +++  N+VY +     R +     + W       I  + YA+PY  L   A+P+F   G ++D G D+++ G+  Y HD++Y+T+ VQ+  + S      YL+IPAF  +K       F   G E ++++    +RK+R K +RKA R
Sbjct:    1 MANQGAKKRKEENARHMAKLRRLIIGCNVVYIIA----RMLIFHSSVAWKHWIGLLITSLAYAIPYKQLDQMAKPSFTDSGELIDGGFDMTSGGICGYLHDVVYITMFVQLASIISDKFWYTYLLIPAFGAYKASGLVRGFLSHGSEGEVEDE--KTRKKREKMERKASR 164          
BLAST of Ggra7105.t1 vs. uniprot
Match: A0A5A7P4V3 (Transmembrane protein-like protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7P4V3_STRAF)

HSP 1 Score: 79.3 bits (194), Expect = 1.600e-15
Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVYAL-RFAVLRGIPRFYQIVWPILLIL-YALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKMCSATSPF---SGDGEEE 142
            MAN  AKK  + N + + TL  +++ASN +Y L R  V      +  +V  IL  L Y +PY  L S A+PTF   G ++D G D+S  G+  Y HD++Y+T+ VQ+  + S+    +YL+IP F  +++      F   S +G EE
Sbjct:    1 MANQGAKKRKEENARHMKTLLRLIIASNAIYLLLRIGVFYSSFTWKHLVGLILTSLAYFIPYQQLDSMAKPTFTDDGELLDGGFDMSTGGICGYLHDVIYITLFVQLSSIISEKFWYIYLVIPGFAAYQLFGLVKGFLSHSSEGAEE 147          
BLAST of Ggra7105.t1 vs. uniprot
Match: A0A0A9FMB4 (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9FMB4_ARUDO)

HSP 1 Score: 77.0 bits (188), Expect = 1.010e-14
Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVY-ALRFAVLRGIPRF-YQIVWPILLILYALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKMCSATSP--FSGDGEEEQIDE 146
            MA   AKK+   N K +  L  ++LASN++Y  +R +++     + + I + +    Y LPY  L S AQP +   G ++D G DL+  G+ EY HD++Y+T+ VQ+  + S+     YL+IPAF  +K+        FSG  E E  DE
Sbjct:    1 MAKQGAKKMKDENKKHMDFLLRLILASNVIYIVVRMSIMHSSFTWKHWIGFIVTSAAYFLPYKQLASMAQPVYSDKGELLDGGFDLNTGGICEYLHDVIYITLFVQLASIISEKFWWTYLVIPAFAGYKIFGLLRGTFFSGGSEGEVEDE 150          
BLAST of Ggra7105.t1 vs. uniprot
Match: A0A5J9UWA9 (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UWA9_9POAL)

HSP 1 Score: 77.0 bits (188), Expect = 2.040e-14
Identity = 61/165 (36.97%), Postives = 90/165 (54.55%), Query Frame = 0
Query:    6 AKKLYKANTKKLGTLRAVLLASNLVY-ALRFAVLRGIPRFYQIVWPILLIL---YALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKMCSATSP--FSGDGEEEQIDEYAAMSRKERRKADRKAKR 164
            AKK+ + N K +  L  V+LASN++Y  +R  +L     F    W  L++    Y LPY  L S AQP +   G I+  G DL+  G+ EY HD++Y+T+ VQ+  + S+     YL+IPAF  +K+        FSG  E E  DE    +RK+R K +++A R
Sbjct:   30 AKKMKEENKKHMEFLLRVILASNVIYMVVRMGILHS--SFTWKHWIGLMVTSAAYFLPYKQLASMAQPVYSDNGEILHGGFDLNTGGICEYLHDVIYITLFVQMASIISEKFWWTYLVIPAFAGYKIFGLLRGTFFSGGSEGEVEDE---KTRKKREKMEKRASR 189          
BLAST of Ggra7105.t1 vs. uniprot
Match: transmembrane protein 208 homolog n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3A2D9 (transmembrane protein 208 homolog n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3A2D9)

HSP 1 Score: 75.9 bits (185), Expect = 3.400e-14
Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVYALRFAVLRGIPRFYQIVWP------ILLILYALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKMCSATSPFSGDGEEEQIDE 146
            MAN  AKK  + N + +  L  +++A N+++ L    +R +     + W       +  + YA+PY  L   A+P +D  G ++D G D+S  GV  Y HD++Y+T+ VQ+  + S      YL+IPAF  +K+   T  F   G E  +++
Sbjct:    1 MANQGAKKRKEENARHMNKLFRLIIACNVIHFL----VRMLVFHSTVSWKHWVGLCVTSLAYAIPYQQLSKMAEPAYDDDGELLDGGFDMSTGGVCGYLHDVIYITIFVQLMSIISGKFWYTYLVIPAFGAYKIFGVTKGFMSQGSEGTMED 148          
BLAST of Ggra7105.t1 vs. uniprot
Match: A0A7S0QPI7 (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QPI7_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 7.270e-14
Identity = 56/170 (32.94%), Postives = 92/170 (54.12%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVYAL-RFAVLRGIPRFYQIVWPILLILYA-LPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKMCSATSP---FSGDGEEEQIDEYAAMSRKERR---KADRKA 162
            MA   AKK  + N + L TLR V +A  ++Y L RF + R    +   +  + LI    + Y ++  AA P +D  G +VD G DL   G + Y HD+LY+ + + V  +F+ W+ L++L +PAF+++++         F+   +E +   Y  MSRK++R   +AD KA
Sbjct:    1 MAGQGAKKRVEDNKRHLQTLRLVTVAGIVLYILGRFVMYRSSVSWANYLGLVTLISAEYMSYRWIALAAAPKYDETGKLVDGGMDLFQGGTVSYAHDVLYICIFLGVVGIFTDWVWLIWLAVPAFILYQLWDKILYPYIFTPRADELEDQSYGPMSRKDKRAQQRADAKA 170          
BLAST of Ggra7105.t1 vs. uniprot
Match: A0A835VSY8 (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835VSY8_9CHLO)

HSP 1 Score: 70.9 bits (172), Expect = 2.810e-12
Identity = 56/173 (32.37%), Postives = 94/173 (54.34%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVYALRFAVLRG--IPRFYQIVWPILLILYALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKM-CSATSPF----SGDGEEEQIDEYAAMSRKERRKADRKAKRQR 166
            MA + AKK ++AN KKL  LR  +    + +AL   VLR   + R++ I +    +L A  Y  +   A+P +   G ++  G DL+  G+  Y HDLLY++V VQV    S +     L++P F ++ +  +   P+    SG G+E+ +DE    +RK+  +A ++A+R+R
Sbjct:    1 MAGAGAKKQFEANRKKLSALRIAIAVGVIAHALIRMVLRQGYLSRWHWIGFGASFMLEAFAYSAISKFAEPEYSESGELLYGGADLNMGGMCGYWHDLLYISVFVQVASCLSVYAWYTLLLVPGFALYMLFANVVLPYWRNSSGAGQEQVLDE---ATRKKLERAQQRAERRR 170          
BLAST of Ggra7105.t1 vs. uniprot
Match: A0A835SRH1 (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SRH1_CHLIN)

HSP 1 Score: 67.8 bits (164), Expect = 4.150e-11
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 0
Query:    1 MANSSAKKLYKANTKKLGTLRAVLLASNLVYALRFAVLRG--IPRFYQIVWPILLILYALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLTVAVQVGVLFSKWMLLVYLIIPAFVVHKM-CSATSPF----SGDGEEEQIDE 146
            MA + AKK  +AN KKL  LR  +    + +AL   VLR     +++ + +    +L A  Y  +   A+P +   G ++  G DL+  G+  Y HDLLY++V VQV    S ++    L++P F ++ +  +   P+    SG G+E+ +DE
Sbjct:    1 MAGAGAKKQLEANRKKLSALRIAIAVGIIAHALIRMVLRQGYASKWHWVGFGATFMLEAFAYSAISKFAEPEYSDSGELLYGGADLNMGGMCGYWHDLLYISVFVQVATCLSAYLWYTLLVVPGFALYMLFANVLLPYWKSTSGGGQEQVMDE 153          
The following BLAST results are available for this feature:
BLAST of Ggra7105.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2922.570e-7370.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q2R03.350e-3040.85Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
transmembrane protein 208-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C893A2.910e-1631.76transmembrane protein 208-like n=2 Tax=Tarenaya ha... [more]
A0A5A7P4V31.600e-1536.05Transmembrane protein-like protein n=1 Tax=Striga ... [more]
A0A0A9FMB41.010e-1435.33Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
A0A5J9UWA92.040e-1436.97Uncharacterized protein (Fragment) n=1 Tax=Eragros... [more]
transmembrane protein 208 homolog n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3A2D93.400e-1430.92transmembrane protein 208 homolog n=1 Tax=Telopea ... [more]
A0A7S0QPI77.270e-1432.94Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A835VSY82.810e-1232.37Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A835SRH14.150e-1131.37Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008506SRP-independent targeting protein 2/TMEM208PFAMPF05620TMEM208_SND2coord: 1..163
e-value: 1.4E-36
score: 125.8
IPR008506SRP-independent targeting protein 2/TMEM208PANTHERPTHR13505TRANSMEMBRANE PROTEIN 208coord: 1..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 121..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 20..38
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:537711..538211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7105.t1Ggra7105.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 537711..538211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7105.t1 ID=Ggra7105.t1|Name=Ggra7105.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=167bp
MANSSAKKLYKANTKKLGTLRAVLLASNLVYALRFAVLRGIPRFYQIVWP
ILLILYALPYMFLRSAAQPTFDSYGNIVDAGTDLSNPGVLEYCHDLLYLT
VAVQVGVLFSKWMLLVYLIIPAFVVHKMCSATSPFSGDGEEEQIDEYAAM
SRKERRKADRKAKRQR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008506SND2/TMEM208