Ggra7019.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7019.t1
Unique NameGgra7019.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length402
Homology
BLAST of Ggra7019.t1 vs. uniprot
Match: A0A2V3J529 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J529_9FLOR)

HSP 1 Score: 523 bits (1346), Expect = 1.640e-181
Identity = 268/385 (69.61%), Postives = 306/385 (79.48%), Query Frame = 0
Query:    2 EPFEAHKDLSLVPLQHMVVAVRNRRLLVRVDIDRPFDTADAFRSAPFATYMYQVAHVDAFIEGLPNVRFAFAIERTITSEEREIVGSMGHSVPSKGMKTKPVSAPQLP-RSNPYMSHPTTIPRPARPLVTQP-KMLQVPQPVPAPPMQQTVVPQRAPAYPPAAARPTQIIYQNPYQFTSTRPIHPQIVQKPSPRALHIGPQITKPPPRIQSRSLLAHSMIPTAPSXXXQVDTGNKIVHPYMKLWEDHDLDDPYEPIFITKDDRFDSKAKRSFIYEDTPPYASRVDHRKLFGLPGKGYPPFYFDGPDISVGDGDPDRVISIERMQKQTGENSEETSSSLEDAPRPVEDGESKYTTAVVAASNYNNSLRNERNDLRRWLIEDLAVDE 384
            +  EAHKD++ V LQHM VAVR+RRLLVRVDIDRPF+TADAFRSAPFAT+M+Q+AHVDAFIEGLP VRFAFAIERTITSEERE+V SMG SVPSKGMKTKP+   QLP R NP++                  KMLQVPQ + APPMQQ+VVPQR P+YPPAAARPTQ++YQNPYQFTS+RP H  I QKPSPRALHI PQITKP PR Q+R +  H  I        QVDT NKIVHPYMKLWEDHD DDPY+PIFITKD+RFD+KA+RSFI+EDTPPYASRVDHR LFG+P K YP +YFDGPDISVG GDPD  +S++R+QK  GE+SEETSSSL+D  +     ES Y +AVVAAS YN SLR+ER  LRRWL+EDLA +E
Sbjct:   94 DSIEAHKDVAHVQLQHMAVAVRDRRLLVRVDIDRPFNTADAFRSAPFATFMFQIAHVDAFIEGLPGVRFAFAIERTITSEEREVVASMGRSVPSKGMKTKPIPTSQLPSRPNPFIXXXXXXXXXXXXXXXXXXKMLQVPQTISAPPMQQSVVPQRTPSYPPAAARPTQVVYQNPYQFTSSRPNHAHIAQKPSPRALHIAPQITKPAPRTQNRPIHTHIPIXXXXXPPPQVDTSNKIVHPYMKLWEDHDPDDPYQPIFITKDERFDTKARRSFIFEDTPPYASRVDHRNLFGVPSKDYPLYYFDGPDISVGGGDPDLEVSVKRLQKPVGEHSEETSSSLDDVIKRDASSESGYASAVVAASEYNKSLRDERIHLRRWLVEDLAAEE 478          
BLAST of Ggra7019.t1 vs. uniprot
Match: R7Q737 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q737_CHOCR)

HSP 1 Score: 248 bits (633), Expect = 2.590e-74
Identity = 154/386 (39.90%), Postives = 219/386 (56.74%), Query Frame = 0
Query:    3 PFEAHKDLSLVPLQHMVVAVRNRR-LLVRVDIDRPFDTADAFRSAPFATYMYQVAHVDAFIEGLPNVRFAFAIERTITSEEREIVGSMGHSVPSKGMKTKPVSAPQLPRSNPYMSHPTTIPRPARPLVTQPKMLQVPQPVPAPPMQQTVVPQRAPAYPPAAARPTQIIYQ-NPYQFTSTRPIHPQIVQKPSPRA-LHIGPQITKPPPRIQSRSLLAHSMIPTAPSXXXQVDTGNKIVHPYMKLWEDHDLDDPYEPIFITKDDRFDSKAKRSFIYEDTPPYASRVDHRKLFGLPGKGYPPFYFDGPDISVGDGDPDRVISIERMQKQTGENSEETSSSLEDAPRPVEDGESKYTTAVVAASNYNNSLRNERNDLRRWLIEDLAVDEE 385
            P   +    LV L HM +A  +   LL+RV+IDRP  + D F+S PFAT+M+QV  VDA I+  P +RFAFAIERT+T+EERE+V         KG+   P++  QL  +N  +  P++IP P     T   + Q        PMQ +   ++  +Y P   RP    YQ NPY ++S R +  Q+ Q  SPR   H   Q  K   R Q RS    SM           D    ++HPY++LWED DLDDPYEPIF+T+DD FD KA++S++ ED  PYA + +++ LFG+P   YP ++F GP +S  DG+PD  + + R Q+   E SE + +S E        G   Y++AV+ A+ YN+ LR +R +LR+WL+ED+  + E
Sbjct:   95 PEHENTKAPLVVLPHMALAAEHEDVLLIRVNIDRPLASEDIFKSIPFATWMFQVVQVDAVIQEFPGIRFAFAIERTVTTEERELV------TVRKGL---PMTPQQLKAANSVLPRPSSIPSPQ----THAAVRQTA----GHPMQPS---RQHSSYSPVTPRPPAAAYQPNPYAYSSGRSLGLQMRQNVSPRVPYHTQHQPVKLTSRAQGRS---GSMATGGTGTQSNADNLRPVLHPYLRLWEDRDLDDPYEPIFVTEDDEFDRKARKSWLVEDKAPYAEQFEYQNLFGVPSSDYPMYFFKGPSLSNVDGEPDIEVVVHRKQQVKVETSEVSGASEEINSHARIGGSDTYSSAVLEAAQYNSILRRDRTELRKWLVEDVQREGE 457          
The following BLAST results are available for this feature:
BLAST of Ggra7019.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5291.640e-18169.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7372.590e-7439.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:72060..73265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7019.t1Ggra7019.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 72060..73265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7019.t1 ID=Ggra7019.t1|Name=Ggra7019.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=402bp
MEPFEAHKDLSLVPLQHMVVAVRNRRLLVRVDIDRPFDTADAFRSAPFAT
YMYQVAHVDAFIEGLPNVRFAFAIERTITSEEREIVGSMGHSVPSKGMKT
KPVSAPQLPRSNPYMSHPTTIPRPARPLVTQPKMLQVPQPVPAPPMQQTV
VPQRAPAYPPAAARPTQIIYQNPYQFTSTRPIHPQIVQKPSPRALHIGPQ
ITKPPPRIQSRSLLAHSMIPTAPSPPPQVDTGNKIVHPYMKLWEDHDLDD
PYEPIFITKDDRFDSKAKRSFIYEDTPPYASRVDHRKLFGLPGKGYPPFY
FDGPDISVGDGDPDRVISIERMQKQTGENSEETSSSLEDAPRPVEDGESK
YTTAVVAASNYNNSLRNERNDLRRWLIEDLAVDEESEEEDEDEDGDQDSS
E*
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