Ggra7013.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7013.t1
Unique NameGgra7013.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length972
Homology
BLAST of Ggra7013.t1 vs. uniprot
Match: A0A2V3J5A6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A6_9FLOR)

HSP 1 Score: 871 bits (2251), Expect = 1.030e-302
Identity = 521/993 (52.47%), Postives = 631/993 (63.54%), Query Frame = 0
Query:    1 MSFASVVDALRASRQQTLSNAAVLDHIASPSNSRPSSNRDARRSPSPETPLPISKHVLSAIFSALDRPPSKPNYVFVENQQENHFLYGLVLPLIARVFAVSCPGLLTVVQLPRSDTCPEWATQSSDDGYGSNGSNGS---KSNAATIPSFVGNSRTPSPSDDGNSTDEPKSNSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANDRASPSPDAVNQDYRALRLICNGFEVLTGKMPPPRKHMGRFTLASVGWEKAGVIQPSHPSRGLSMNFSNGMVTPTEGILVTFSNGSLCLLTLWDPLSDLQALKVSPETPVMVFTFATAGHLSIGDLISKNQPSLTEAAMRVKGMCERPNFMFVEIGPGGASPINSSTPEPMPVSDCVRPEHPRQHADPPNVTRPL-PVQSSQERPPIPRYIPIDAVPRAIPLFVNTINQCFIDPPYQDIPEHAYENALINDRYRVDKGHQHPHPVPDAYPKHVDNAKVPEKPTSEAQQKNSXXXXXSRPQTNPNGFVKSVQNDDKACKPHDLTSEANNMKST-TSVRPEARNLESNPPSGAQSGYPAMYGYYGCRPDHMYPRGHQQQGHDPFSSRFIQHPA-ELD-RSHIHPNHAAYFLSHPPNGVISNGAYAHQHGSSYAVGAYYSLGTHNGLPH-QAPDRAQGWHPGMQTLPHGVEHVPNSHLVHHAGRDVSLTYGAHRQFQPAIGGQFPPSYYVVPPSSQVYGQTPA-----------ASLQHSKRPGHPQSLAETYNGVPRTERPLAGSQNLMTSHDREPSSSHFERTKAKGSTITSNPPDRGSAKKEEPRTRLSP--EEDGIDEEKEKALQVLVGLRGSAVRGRSFANSDAPKESTDSLSNAQNYRSLNVSREAPASEHRMFTDKPQAVTERSRSIHNRGPS-IRNGVQTPPTRRTGLKRQQRNSDTQSSTSTNSQGTTLMKGAVTGNSHVPGQGYPSWNQKRPRQR 971
            MS  +V+DALR+SRQ  L+NAAVLDHIA+PS+ RP    D +RSPSP+ P PISKH+L+ +F+ALD+PPSKPNYVFVEN Q NHFLYGLVLPLIARV AVSCPGLL VVQLPRSD+ PEWAT SSDDGYGSN        KSNAAT PS  GNSRTPSPSDDGNSTDE KSNSP                                                      S +DRASPSPDAVNQD+RALRLICNGFEVLTGKMPPPRK MG FTLASVGWEKAGVI PSH SRGL M+FSNGMVTPTEGI+ +FSNGSLCLLTLWDPLS+L  LK+S ETPV+VFTFA  GHLS+G+LISK+  +L+E A RVK +CERPNFMFVEIG G    +N+ +PE +P ++  R +     ++    T P  P ++S ER  IPRY+P+DAVPRAIPLFVNT +QCF+DPPYQDIPE+AYENAL+NDRYRVDK  +   P P  Y K  + A+   K   E QQ+ +     +  Q   NG +K    ++K      L   A+N  +   SV P+   +++ P   AQS +P ++ YYG R DH YP  HQ  GHD   SR +  P+ E+D   HIH  H  Y++  P NGVISN  YAH  GS Y VGAYY+     GL H Q PDR   WHPG+ ++PH        HL+H   RD+ + Y   R FQP IGGQ+   YY++PPSSQ+Y Q P            +S  + K  G   + AET+NG P+         N    H   P+ +    ++ KGST+ SN       K  + +TR +P  + DGIDEEKEK L+ LVG+R  AVR R+  N+ AP +STD  S+ + Y +   S++APA E R+   +P      S  + N GPS +  G Q+PP+RR   KRQQR SDTQSSTSTNSQG  LM GAVTG+SHVP QGY  W QKR RQR
Sbjct:    1 MSVTNVLDALRSSRQHALTNAAVLDHIATPSHPRPDQPSDTQRSPSPDPPSPISKHLLTNVFAALDQPPSKPNYVFVENHQRNHFLYGLVLPLIARVLAVSCPGLLAVVQLPRSDSTPEWATPSSDDGYGSNXXXXXXXCKSNAATTPSMNGNSRTPSPSDDGNSTDERKSNSPELPPTSQLLRRAEKELQQHNQEQQHKPLPTESRPL-------------------SNDDRASPSPDAVNQDHRALRLICNGFEVLTGKMPPPRKDMGGFTLASVGWEKAGVIAPSHSSRGLPMSFSNGMVTPTEGIVASFSNGSLCLLTLWDPLSNLHTLKISHETPVIVFTFAAVGHLSVGELISKDHSALSEPASRVKTICERPNFMFVEIGHGAGPNLNAPSPEQLPDTNPSRQQEDDNSSN--RATSPSGPARTSPERQSIPRYVPMDAVPRAIPLFVNTTHQCFVDPPYQDIPENAYENALLNDRYRVDKQQKQQQP-PVPYSKPAEVARPASKIDPETQQREANQAP-NPVQHVSNGKLKP---NEKTPASAPLALPASNAATIPASVAPDYNAVDTRPM--AQSAHPPVFDYYGYRSDHAYPAPHQH-GHDALQSRQVLQPSVEIDPHHHIHHRHPGYYIP-PANGVISNPPYAHHSGSPYPVGAYYAAPPQPGLHHHQVPDRHPAWHPGVPSVPHXXXXXXXXHLMHQR-RDIPMAYPPPRPFQPGIGGQYASPYYMMPPSSQIYRQNPPPLGVAHPSVVKSSDIYRKPHGPHHNYAETFNGAPQAPGSATREANRSIPHSSAPALAPGVASQPKGSTVASN-----RDKSVDAKTRTNPLIKYDGIDEEKEKVLEALVGMRDGAVRSRNVTNAQAPWKSTDDCSDHRPYPTY--SQQAPAYEQRISPHRPMCGMPNS--VGNAGPSAVPRGYQSPPSRRMSSKRQQRPSDTQSSTSTNSQGAMLMNGAVTGSSHVPDQGYAGWQQKRQRQR 953          
BLAST of Ggra7013.t1 vs. uniprot
Match: R7Q571 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q571_CHOCR)

HSP 1 Score: 322 bits (824), Expect = 9.760e-91
Identity = 312/991 (31.48%), Postives = 458/991 (46.22%), Query Frame = 0
Query:   49 TPLPISKHVLSAIFSALDRPPSKP------NYVFVENQQENHFLYGLVLPLIARVFAVSCPGLLTVVQLPRSDTCPEWATQSSDDGYGSNGSNGSKSNAATIPSFVGNSRTPSPSDDGNSTDEPKSNSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANDRASPSPDAVNQDYRALRLICNGFEVLTGKMPPPRKHMGRFTLASVGWEKAGVIQPSHPSRGLSMNFSNGMVTPTEGILVTFSNGSLCLLTLWDPLSDLQALKVSPETPVMVFTFATAGHLSIGDLISKNQPSLTEAAMRVKGMCERPNFMFVEIGPGGASPINSSTPEPMPVSDCVRPEHPR----QHADPPNVTRPLPVQS----SQER-PPIPRYIPIDAVPRAIPLFVNTINQCFIDPPYQDIPEHAYENALINDRYRVDKGHQHPHPVPDAYPKHVDNAKVPEKPTSEAQQKNSXXXXXSRPQ-TNPNGFVKSV-QNDDKACKPH-DLTSEANNMKSTTSVRPEARNLES------NPPSGAQ---SGYP--------------AMYGYYGCRPDHMYPRGHQQQGHDPFSSRFIQHPAELDRSHIHPNHAA-------YFLSHPP--NGVISNGAYAHQHGSSYAVGAYYSLGTHNGLPHQAPDRAQGWHPGMQTLPHGVEHVPNSHLVHHAGRDVSLTYGAHRQFQPAIGGQFPPSYYVVPPSSQVYG-------QTPAASLQHSKRPGHPQS-LAETYNGVPRTERPLAGSQNLM----TSHDREPSSSHFERTKAKGSTITSNPPD--RGSAKKEEPRTRLSPEEDGIDEEKEKALQVLVGLRGSAVRGRSFANSDAPKESTDSLSNAQNYRSLNVSREAPASE-HRMFTDKPQAVTERSRSIHNRGPSIRNGVQTPPTRRTGLKRQQRNSDTQSSTSTNS--QGTTLMKGAVTGNS-HVPGQGYPSWNQKRPRQR 971
            +P PISK++LS++F+A+DR  +K       NY+F+ N +EN+FLYGLV+PLIAR+ AVSCPG+L +VQLPR     EW++ +  + YGS GSNGSKS + T PS    SRT SPSD+     E KS SP                                                           +SP P+    D+  LRLICNGFEVLTGKMP P+  MG FT+ASVGWEKAGV+ PS PS+G++M+FSNGM+             S+C LTL DPL   ++L+VS  TPV+VF+F   G +  G ++     +    A R++ M +R N   VEIG    +  ++ +  P   S+  +P+  +     H D      P P +S    S  R PP+     I AVPRAIPLFVNTINQ FID P+ ++PE++Y N L +DR+R D  H        ++ +     ++  + +   +  N      +  Q T  NG V++  Q D  + + H +  S  +++K + SV      +ES      + P+ +Q   SG P              +M+ YY   P   +P G+   GH    SR +  P  +     H  HA        YF + PP  +G I +G Y HQ         YYS+    G+ H  P   + WH  M TL H    +P+ H +  A RD+ + + +HR    A G      +   P  SQ Y          P  ++    +P    S ++    G+P  + P+  S   M    TS +++P+ +H    K    T  + PP   +     + P   +  E + + ++KE AL+ L+ ++ S V G + A     + +T+       +   +V   AP  E H   T    +  +R         S ++G            R   ++ T S TSTNS  QG  L +GA+ GNS H   Q   +  +K  RQR
Sbjct:  131 SPHPISKYILSSLFTAVDRLAAKSKDEESHNYLFLNNGKENNFLYGLVVPLIARLLAVSCPGVLCIVQLPRQPRHVEWSSPAHCN-YGSYGSNGSKSLSHTTPSPQDTSRTASPSDEDLGGAERKSISPDSNPGTAELIRHADKILSGAEAAAEGRAAAARL-----------------------RKESSPPPNNSVHDHGTLRLICNGFEVLTGKMPSPKSSMGPFTMASVGWEKAGVVSPSTPSKGVTMSFSNGMMVXXXXXXXXXXXXSMCFLTLEDPLLAAESLRVSLATPVVVFSFLHPGDVPCGSVLQSEAATPHPEAERIRAMLDRENVFVVEIGDANNNSSSNVSGSP-DASESTQPDAAQIVSFGHGDVLESREPDPKESVDLCSPHRCPPVV----IGAVPRAIPLFVNTINQTFIDGPFYEVPENSYGNTLPDDRFR-DITHS-------SHLRRSSRGRIINRESKRVRHPNGKAPFPAPGQATYNNGIVQTTAQYDSASDRAHVEGLSHESSLKQSESVLQSNSTIESAHLHASSSPAVSQAHTSGGPPTSLNQETAAFQGQSMHEYYPYSPFPSFPPGYLP-GHGGQDSRNMAGPGAVR----HQGHAPVNGTDLRYFHAAPPPPSGPIGHGQYHHQ--------PYYSVPL-PGMAHSVPQNGRPWHERMPTLSHPPAPLPSPHPMD-ARRDMPVHFSSHRAVVSAHGHYNSQHFQGPPHLSQGYDGRHNHTVHGPGVAVYQDHKPSRNYSPVSAGMAGIPVRDSPMGESYYKMADAYTSGEKQPARNHGGTPK----TGIAAPPQHLQSVVTTKLPLGSVPSEHEQLSKDKESALRALMEMQ-SGVHGEARAQRGRSETATEG------HHDRSVESRAPGKEKHWRNTSSQASHADREIRPAATASSPQDGSFI------ANNRSHVSTGTNSGTSTNSHSQGKALTQGAMIGNSPHSNHQSRIALQRKNKRQR 1052          
BLAST of Ggra7013.t1 vs. uniprot
Match: M2Y5N4 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5N4_GALSU)

HSP 1 Score: 64.3 bits (155), Expect = 1.040e-6
Identity = 70/292 (23.97%), Postives = 109/292 (37.33%), Query Frame = 0
Query:   66 DRPPSKPNYVFVENQQENHFLYGLVLPLIARVFAVSCPGLLTVVQLPRSDTCPEWA-TQSSDDGYGSNGSNGSKSNAATIPSFVGNSRTPSPSDDGNSTDEPKSNSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANDRASPSPDAVNQDY--------RALRLICNGFEVLTGKMPPPRKHMGRFTLASVGWEKAGVIQPSHPSRGLSMNFSNGMVTPTEGILVTFSNGSLCLLTLWDPLSDLQALKVSPETPVMVFTFATAGH 348
            D P     Y+ +E+ + +HFLYGLV+PL+AR+  VSCP ++ +V++P  +   + + + SSD+   S  ++  + NA    S   +SR  +    G S     S S                                                        ++ R S    A N  +        RA RLI +  E LT K+  P      FTL+ +            PSR   +           G  V ++NGS C +T+ D    L   +   +TPV++FTF    H
Sbjct:  145 DVPSKYFRYLSIESDRGSHFLYGLVIPLVARILLVSCPNVMCIVEIPVIERKKQTSQSSSSDESIPSGNTSPGEGNAEFHRSSSNDSRGSTHIQSGESLQRDNSCS------------------------------------------------------EKSSHRGSTLHGAFNCSFITDPFRRERAARLISSSVEALTAKVHVPHHDGSEFTLSRI-----------QPSRHCYIRDEKSRTLC--GAKVEYTNGSSCEVTVDDAFHVLAIRRPELDTPVLLFTFDCDSH 369          
The following BLAST results are available for this feature:
BLAST of Ggra7013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5A61.030e-30252.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5719.760e-9131.48Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2Y5N41.040e-623.97Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 508..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 898..971
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 793..807
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 882..897
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 854..876
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 740..832
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..578
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 808..832
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 740..756
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 850..971

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000211_piloncontigtig00000211_pilon:228027..230942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7013.t1Ggra7013.t1Gracilaria gracilis GNS1m malemRNAtig00000211_pilon 228027..230942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7013.t1 ID=Ggra7013.t1|Name=Ggra7013.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=972bp
MSFASVVDALRASRQQTLSNAAVLDHIASPSNSRPSSNRDARRSPSPETP
LPISKHVLSAIFSALDRPPSKPNYVFVENQQENHFLYGLVLPLIARVFAV
SCPGLLTVVQLPRSDTCPEWATQSSDDGYGSNGSNGSKSNAATIPSFVGN
SRTPSPSDDGNSTDEPKSNSPEPTRTVPIPKHPDQQHHKLPLPSQQQQQL
QPQQQQQSQSQQPQQQQEQQQQQQMSANDRASPSPDAVNQDYRALRLICN
GFEVLTGKMPPPRKHMGRFTLASVGWEKAGVIQPSHPSRGLSMNFSNGMV
TPTEGILVTFSNGSLCLLTLWDPLSDLQALKVSPETPVMVFTFATAGHLS
IGDLISKNQPSLTEAAMRVKGMCERPNFMFVEIGPGGASPINSSTPEPMP
VSDCVRPEHPRQHADPPNVTRPLPVQSSQERPPIPRYIPIDAVPRAIPLF
VNTINQCFIDPPYQDIPEHAYENALINDRYRVDKGHQHPHPVPDAYPKHV
DNAKVPEKPTSEAQQKNSPEQPTSRPQTNPNGFVKSVQNDDKACKPHDLT
SEANNMKSTTSVRPEARNLESNPPSGAQSGYPAMYGYYGCRPDHMYPRGH
QQQGHDPFSSRFIQHPAELDRSHIHPNHAAYFLSHPPNGVISNGAYAHQH
GSSYAVGAYYSLGTHNGLPHQAPDRAQGWHPGMQTLPHGVEHVPNSHLVH
HAGRDVSLTYGAHRQFQPAIGGQFPPSYYVVPPSSQVYGQTPAASLQHSK
RPGHPQSLAETYNGVPRTERPLAGSQNLMTSHDREPSSSHFERTKAKGST
ITSNPPDRGSAKKEEPRTRLSPEEDGIDEEKEKALQVLVGLRGSAVRGRS
FANSDAPKESTDSLSNAQNYRSLNVSREAPASEHRMFTDKPQAVTERSRS
IHNRGPSIRNGVQTPPTRRTGLKRQQRNSDTQSSTSTNSQGTTLMKGAVT
GNSHVPGQGYPSWNQKRPRQR*
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