Ggra7006.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7006.t1
Unique NameGgra7006.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length256
Homology
BLAST of Ggra7006.t1 vs. uniprot
Match: A0A2V3J6D7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6D7_9FLOR)

HSP 1 Score: 352 bits (903), Expect = 3.220e-120
Identity = 186/257 (72.37%), Postives = 210/257 (81.71%), Query Frame = 0
Query:    1 MEAACDFSALHCPSVNPPAPSAEKTVITGWEIERIPVENNTHPCFSPSLGHYTVPVDGLYQIIVEVIPLGGPAIAGEKNQRQVVPYAVCLQEPPSEQEDQILRRFHDIGNKFAKVEHIKAGTKITCVRMPNVPGDECLRFKVEIVIRKRKRVEKELTKKERXXXXXXXXXXV-RSPRFLPARGRGEASRASEHDLAQFDTDDASDSDSEWENGFESDSTSDELPSSRLAKRFKPSRPF--DDLNRSEVFFDINDEVV 254
            M+AACDFSALHCP  NPP PSAE  V+ GW IER  +ENN+HPCF P    Y VPVDGLY+I+VE+IPLGGPAI  + N+RQ+VPYA+CLQEPP++ +DQILRR+HDIGNKFAKVEHIKAGT ITC+RMPNVPGDEC+RFKVEI++RKRKR          XXXXXXXX  + R P  LPARGRG+ASR  ++D    D DDASDSDSEWENGFESDSTSD+LPSSRLAKRFK SRP   DDLNRSEVFFDINDEVV
Sbjct:    1 MDAACDFSALHCPCTNPPPPSAETAVVKGWTIERDTIENNSHPCFDPVSASYIVPVDGLYKIVVELIPLGGPAIVNDNNRRQIVPYALCLQEPPTQLDDQILRRYHDIGNKFAKVEHIKAGTTITCIRMPNVPGDECIRFKVEIILRKRKREXXXXXXXXXXXXXXXXXQAMARHPTILPARGRGDASRLHDNDPNPQDLDDASDSDSEWENGFESDSTSDDLPSSRLAKRFKRSRPAGSDDLNRSEVFFDINDEVV 257          
BLAST of Ggra7006.t1 vs. uniprot
Match: A0A2V3IE41 (Uncharacterized protein n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE41_9FLOR)

HSP 1 Score: 295 bits (756), Expect = 3.010e-97
Identity = 153/243 (62.96%), Postives = 182/243 (74.90%), Query Frame = 0
Query:   16 NPPAPSAEKTVITGWEIERIPVENNTHPCFSPSLGHYTVPVDGLYQIIVEVIPLGGPAIAGEKNQRQVVPYAVCLQEPPSEQEDQILRRFHDIGNKFAKVEHIKAGTKITCVRMPNVPGDECLRFKVEIVIRKRKRVEKELTKKERXXXXXXXXXXVRSPRF--LPARGRGEASRASEHDLAQFDTDDASDSDSEWENGFESDSTSDELPSSRLAKRFKPSRP--FDDLNRSEVFFDINDEVV 254
             PP PSAEKTV+ GW IER  VE+NTHPCF      YTVP DGLY+I+VE+IPLGGPAI  + NQRQ+VPY++CLQEPP+E +DQI+RR+HDIGNK +KVEHIKAGT I+C+RMPNVPGDEC+RFKVEI++RKRKR ++E T+KE+            +     L + G G+ASR  ++          SDSDSEWE GFESDSTSD+LPSSRLAK    SRP   DDLNRSEVFFDINDEVV
Sbjct:   58 KPPPPSAEKTVVKGWAIERDIVEDNTHPCFDHGSASYTVPADGLYKIVVELIPLGGPAIFNDNNQRQIVPYSLCLQEPPNELDDQIIRRYHDIGNKLSKVEHIKAGTTISCIRMPNVPGDECIRFKVEIILRKRKRDKREPTRKEKKNRKRMLRRQTMAHHLTTLSSHGSGDASRLHDYYPHPQHLGGTSDSDSEWEKGFESDSTSDDLPSSRLAKPLMISRPTGLDDLNRSEVFFDINDEVV 300          
BLAST of Ggra7006.t1 vs. uniprot
Match: A0A2V3IC89 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC89_9FLOR)

HSP 1 Score: 260 bits (664), Expect = 2.860e-84
Identity = 118/161 (73.29%), Postives = 140/161 (86.96%), Query Frame = 0
Query:    1 MEAACDFSALHCPSVNPPAPSAEKTVITGWEIERIPVENNTHPCFSPSLGHYTVPVDGLYQIIVEVIPLGGPAIAGEKNQRQVVPYAVCLQEPPSEQEDQILRRFHDIGNKFAKVEHIKAGTKITCVRMPNVPGDECLRFKVEIVIRKRKRVEKELTKKER 161
            MEAACDFSALHCPS NPP PSAEKTV+ GWEIER  VE+NTHPCF      YTVP DGLY+I+VE+IPLGGPAI  + NQRQ+VPY++CLQEPP+E +DQI+RR+HDIGNK AKVEHIKAGT I+C+RMPNVPGDEC+RFKVEI++RKRKR ++E  +KE+
Sbjct:    1 MEAACDFSALHCPSTNPPPPSAEKTVVKGWEIERDIVEDNTHPCFDHGSASYTVPADGLYKIVVELIPLGGPAIFNDNNQRQIVPYSLCLQEPPNELDDQIIRRYHDIGNKLAKVEHIKAGTTISCIRMPNVPGDECIRFKVEIILRKRKRDKREPIRKEK 161          
BLAST of Ggra7006.t1 vs. uniprot
Match: R7Q3C2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3C2_CHOCR)

HSP 1 Score: 147 bits (372), Expect = 7.360e-40
Identity = 96/248 (38.71%), Postives = 132/248 (53.23%), Query Frame = 0
Query:    6 DFSALHCPSVNPPAPSAEKTVITGWEIER-----IPVENNTHPCFSPSLGHYTVPVDGLYQIIVEVIPLGGPAIAGEKNQRQV-VPYAVCLQEPPS---EQEDQILRRFHDIGN-KFAKVEHIKAGTKITCVRMPNVPGDECLRFKVEIVIRKRKR-VEKELTKKERXXXXXXXXXXVRSPRFLPARGRG-----EASRASEHDLAQFDTDDASDSDSEWENGFESDSTSDELPSS-----RLAKRFK 232
            DFSALHCP   P   S+EK  +  W +E       P   N HPCF    G YTV +DGLY ++V++IP+G    A     R+  V Y V +QEPP+   + +D I   ++D+G+  FA+V H+K GT +TC++MP+    EC+R KVE++ RKRKR    ELTKKE             +   L +   G     +         A  D+       S+W +GFESD+T+D+LP S     RLAKRFK
Sbjct:    5 DFSALHCPPRRPAMVSSEKAPLRQWNVEHNVTRPTPHSPNIHPCFDSFSGIYTVALDGLYTLVVQLIPIGAARYAHSSPVRRAWVDYVVRVQEPPAPDTKPDDTIESEYYDVGSVNFAQVVHLKKGTSVTCLKMPSCAASECVRLKVELLQRKRKRPAPPELTKKEMKKRKKIKRIAESAAASLNSLPNGNTLSPQTYHGKTETSASRDSSXXXXXXSDWSHGFESDTTADDLPHSNRGVGRLAKRFK 252          
BLAST of Ggra7006.t1 vs. uniprot
Match: A0A2V3ILL4 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILL4_9FLOR)

HSP 1 Score: 84.0 bits (206), Expect = 7.120e-17
Identity = 51/79 (64.56%), Postives = 56/79 (70.89%), Query Frame = 0
Query:  178 LPARGRGEASRASEHDLAQFDTDDASDSDSEWENGFESDSTSDELPSSRLAKRFKPSRP--FDDLNRSEVFFDINDEVV 254
            L + G G+ASR  ++          SDSDSEWE GFESDSTSD+LPSSRLAK    SRP   DDLNRSEVFFDINDEVV
Sbjct:   45 LSSHGSGDASRLHDYLSHPQHLGGTSDSDSEWEKGFESDSTSDDLPSSRLAKPLMISRPTGLDDLNRSEVFFDINDEVV 123          
The following BLAST results are available for this feature:
BLAST of Ggra7006.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J6D73.220e-12072.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE413.010e-9762.96Uncharacterized protein n=5 Tax=Gracilariopsis cho... [more]
A0A2V3IC892.860e-8473.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3C27.360e-4038.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ILL47.120e-1764.56Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000211_piloncontigtig00000211_pilon:171955..172722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7006.t1Ggra7006.t1Gracilaria gracilis GNS1m malemRNAtig00000211_pilon 171955..172722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7006.t1 ID=Ggra7006.t1|Name=Ggra7006.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=256bp
MEAACDFSALHCPSVNPPAPSAEKTVITGWEIERIPVENNTHPCFSPSLG
HYTVPVDGLYQIIVEVIPLGGPAIAGEKNQRQVVPYAVCLQEPPSEQEDQ
ILRRFHDIGNKFAKVEHIKAGTKITCVRMPNVPGDECLRFKVEIVIRKRK
RVEKELTKKERKKRNKRQRRQVRSPRFLPARGRGEASRASEHDLAQFDTD
DASDSDSEWENGFESDSTSDELPSSRLAKRFKPSRPFDDLNRSEVFFDIN
DEVVS*
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