Ggra7001.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7001.t2
Unique NameGgra7001.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length421
Homology
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BLAST of Ggra7001.t2 vs. uniprot
Match: A0A096P8C1 (SET domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P8C1_OSTTA)

HSP 1 Score: 58.9 bits (141), Expect = 8.960e-6
Identity = 69/251 (27.49%), Postives = 98/251 (39.04%), Query Frame = 0 
Query:    1 MLGGRSR-----WARYIALLPRSLQEMGVPLGVDDETLRELFAGTGVDDVAISMKRELQDVFTDVVAPILRTRATEMGLGKE-CLRH-VRRERFLWACGVVASRAFDVGAGLGNCLVAVADMFNHSGGGREHVHIEAVGAWRGDDAEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNSHKQXXXXXXXHALKMVCVRDAHTDEELFNTFGDKSNIRLFLHYGFTERNSQQHAAL 244
            +LGG S      W  Y  +LPR   E  +P+  D++  R L  GT +++       E  D F +  A  +        LGKE C  H    E +  A  + ASRAF VG   G CLV  AD+FNH  G        +V  +  +D+++                                           +G++           AL +  V D    EELFNTFG KSN  L   YGF E ++++ A +
Sbjct:  108 LLGGPSSVAGSFWDGYAEILPRR-GERSLPMYWDEDERRTL-TGTELEECL----EEDDDAFEEDYATAVEA------LGKEMCDAHGFTLETYKAAASIAASRAFCVGGRYGECLVPCADLFNHRTG------TNSVAVFGIEDSDDDCD----------------------------------------EGHNDDTG-------ALIIKTVVDVKAGEELFNTFGSKSNTNLLHRYGFAETHNKETACV 293
The following BLAST results are available for this feature:
BLAST of Ggra7001.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A096P8C18.960e-627.49SET domain n=2 Tax=Ostreococcus tauri TaxID=70448 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1410.10set domain protein methyltransferase, domain 1coord: 1..233
e-value: 6.1E-30
score: 106.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..205
NoneNo IPR availablePANTHERPTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEcoord: 4..325
NoneNo IPR availableCDDcd10527SET_LSMTcoord: 1..234
e-value: 6.63832E-20
score: 86.349
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 2..121
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 196..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000211_piloncontigtig00000211_pilon:155815..157077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7001.t2Ggra7001.t2Gracilaria gracilis GNS1m malemRNAtig00000211_pilon 155815..157077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7001.t2 ID=Ggra7001.t2|Name=Ggra7001.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=421bp
MLGGRSRWARYIALLPRSLQEMGVPLGVDDETLRELFAGTGVDDVAISMK
RELQDVFTDVVAPILRTRATEMGLGKECLRHVRRERFLWACGVVASRAFD
VGAGLGNCLVAVADMFNHSGGGREHVHIEAVGAWRGDDAEESDDDSDDSD
DKDEEHDKDDNNNDEDDRDNDDEDDNDDVDENDDDGNSHKQEEEEEEEHA
LKMVCVRDAHTDEELFNTFGDKSNIRLFLHYGFTERNSQQHAALLSRHSI
EQAARLEHQSQQEQDAATRPLRTRCLSLADELMADEQQHGQLELTSDEPL
PPPLLALLAVLTRAPHRLRALAHDDLHFAQWLLHLRPRDVLADDDGGARA
RRVLRRVVDDKCAAMAARRAAGETGGGREGAVALAARRVRHSTAAALQQL
RRVIDDGGDDVRGEKRARLH*
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