Ggra6950.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6950.t1
Unique NameGgra6950.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length438
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6950.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 409..437
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 179..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 273..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 304..387
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 388..408
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..219
NoneNo IPR availableTMHMMTMhelixcoord: 159..178
NoneNo IPR availableTMHMMTMhelixcoord: 285..307
NoneNo IPR availableTMHMMTMhelixcoord: 250..272
NoneNo IPR availableTMHMMTMhelixcoord: 388..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:317031..318344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6950.t1Ggra6950.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 317031..318344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6950.t1 ID=Ggra6950.t1|Name=Ggra6950.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=438bp
MYAFRPLCFSGWSELGDTDSAIQSLIEMDGTMCRTKESIFMLPGAGVGVP
CKVQLLLYPDRAELNFNSDLLLTFDKVTGKGRVRGPEKDVRNWAPMREMN
ELCKFVSEHNDREDMLLENPDFYRMLSGKVHFGRCLRSAHEREGHGWLRR
MGSQICGDSLMLYCVLWTLALLLLYGVIKPALVHVLKSETGSVSVYAWRV
LTVGVIESLLHVLFTEGLQSVQEGLFGSVAIESFHSERRLGIWAASLNGF
GAFTLSGLLFVNSCIALSFHFFPEGRGLVDAFKVNSVAFSSAGFLLGLGN
YCLQRWLVLWSTGNGSNHVMDLPQERRTVGKVLQIVVHSGGSTLKSMMFM
NGMGKAVEPFFQRFVPIVSAQLVSDSFSDGLRKRMSRVVPPVLGNTAFVV
LIIMYSVAELQERALVRRKWEALYAGNERKWRRFVSL*
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