Ggra6946.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6946.t1
Unique NameGgra6946.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length257
Homology
BLAST of Ggra6946.t1 vs. uniprot
Match: A0A2V3IFJ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFJ7_9FLOR)

HSP 1 Score: 78.6 bits (192), Expect = 1.850e-15
Identity = 45/60 (75.00%), Postives = 48/60 (80.00%), Query Frame = 0
Query:  193 LKPYQCETCSKSFGYKGDLGKHRVSXXXXXXXXXXXXXXKFARNFYVKRHIETIHEKKNG 252
            +KPYQC+ CSKSFGYKGDL KH  S     XXXXXXXXX  ARNFYVKRHIET+HEKK G
Sbjct:    1 MKPYQCDLCSKSFGYKGDLTKHMSSHTGDKXXXXXXXXXXXARNFYVKRHIETVHEKKTG 60          
BLAST of Ggra6946.t1 vs. uniprot
Match: zinc finger protein 271-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2D5B (zinc finger protein 271-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2D5B)

HSP 1 Score: 65.1 bits (157), Expect = 2.460e-8
Identity = 36/88 (40.91%), Postives = 42/88 (47.73%), Query Frame = 0
Query:  130 LTCDKCPRTFASRVQFDQHISVFHARSRVPSRQREANFVCSYCGKKFTSPSKRTLHVNATHMGLKPYQCETCSKSFGYKGDLGKHRVS 217
             TC+ C  TF S   F  H    H R           F+CSYCGK FTS   R  H+   H G KPY+CE CS +F    DL  HR +
Sbjct:  849 FTCEICEETFESFDAFHDHGVKVHRR-----------FICSYCGKVFTSRPNRERHIRY-HTGEKPYKCELCSSTFLRGDDLKYHRTT 924          
BLAST of Ggra6946.t1 vs. uniprot
Match: A0A4T0FWW0 (Uncharacterized protein n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FWW0_9BASI)

HSP 1 Score: 62.8 bits (151), Expect = 1.070e-7
Identity = 29/86 (33.72%), Postives = 46/86 (53.49%), Query Frame = 0
Query:  131 TCDKCPRTFASRVQFDQHISVFHARSRVPSRQREANFVCSY--CGKKFTSPSKRTLHVNATHMGLKPYQCETCSKSFGYKGDLGKH 214
            TC  C + F++R   +QH+ +   R     +  E +F C    C K F S     +HV+ TH+ ++P+ C+ C KS+GYK  L +H
Sbjct:  184 TCPHCGKQFSNRTNLNQHLHLHDQR-----QVAEKDFHCEVENCNKSFKSQRALNVHVDTTHLNIRPFVCQLCGKSYGYKHLLQRH 264          
BLAST of Ggra6946.t1 vs. uniprot
Match: A8Q1W1 (Uncharacterized protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8Q1W1_MALGO)

HSP 1 Score: 62.0 bits (149), Expect = 1.790e-7
Identity = 34/91 (37.36%), Postives = 47/91 (51.65%), Query Frame = 0
Query:  131 TCDKCPRTFASRVQFDQHISVFHARSRVPSRQRE---ANFVCSY--CGKKFTSPSKRTLHVNATHMGLKPYQCETCSKSFGYKGDLGKHRV 216
            TC  C R++ASR Q  +H  V  A S   S       A + C +  C   F S     +HV+  H G KP+QC+ C +SFGYK  L +H++
Sbjct:  138 TCSVCSRSYASRDQLKRHAVVHDATSSSLSTAESIDVAEWTCPWNGCEHVFLSRYALQVHVSRVHFGDKPFQCDVCGQSFGYKHLLRRHQM 228          
BLAST of Ggra6946.t1 vs. uniprot
Match: zinc finger protein 585A-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0E84D (zinc finger protein 585A-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0E84D)

HSP 1 Score: 59.3 bits (142), Expect = 1.970e-6
Identity = 26/84 (30.95%), Postives = 47/84 (55.95%), Query Frame = 0
Query:  132 CDKCPRTFASRVQFDQHISVFHARSRVPSRQREANFVCSYCGKKFTSPSKRTLHVNATHMGLKPYQCETCSKSFGYKGDLGKHR 215
            C  C +TF S++ ++ H+     R ++ +R    +  CS+C  +F S ++  LHVN +H+ +KPY C+ C   F    +L +H+
Sbjct:  634 CQLCDKTFRSQMCYNNHLQRHVLRFKIYNRHHLQS--CSFCEMEFWSENQLLLHVNKSHLQIKPYHCDMCDSQFYTDKNLVEHK 715          
BLAST of Ggra6946.t1 vs. uniprot
Match: A0A4C1ZKI1 (Zinc finger protein 268 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1ZKI1_EUMVA)

HSP 1 Score: 57.0 bits (136), Expect = 8.880e-6
Identity = 25/85 (29.41%), Postives = 44/85 (51.76%), Query Frame = 0
Query:  132 CDKCPRTFASRVQFDQHISVFHARSRVPSRQREANFVCSYCGKKFTSPSKRTLHVNATHMGLKPYQCETCSKSFGYKGDLGKHRV 216
            C  C + F S   +  HI    ++  + ++ R     CS+C K++ +  +  LHVN TH+ +KPY C  C   F  K ++ +H++
Sbjct:  229 CTLCGKLFKSLQHYGTHIQRHVSKLNITTKTRVN---CSFCEKEYKTMEQLDLHVNKTHLQMKPYSCNMCDGQFYTKKNMVRHKI 310          
The following BLAST results are available for this feature:
BLAST of Ggra6946.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IFJ71.850e-1575.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
zinc finger protein 271-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2D5B2.460e-840.91zinc finger protein 271-like n=1 Tax=Mercenaria me... [more]
A0A4T0FWW01.070e-733.72Uncharacterized protein n=1 Tax=Wallemia hederae T... [more]
A8Q1W11.790e-737.36Uncharacterized protein n=1 Tax=Malassezia globosa... [more]
zinc finger protein 585A-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0E84D1.970e-630.95zinc finger protein 585A-like n=1 Tax=Plutella xyl... [more]
A0A4C1ZKI18.880e-629.41Zinc finger protein 268 n=1 Tax=Eumeta variegata T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 167..190
e-value: 0.011
score: 25.0
coord: 224..247
e-value: 0.39
score: 19.8
coord: 130..153
e-value: 0.064
score: 22.4
coord: 196..218
e-value: 0.027
score: 23.6
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 167..190
e-value: 0.0015
score: 18.9
coord: 196..218
e-value: 0.004
score: 17.5
coord: 224..247
e-value: 0.005
score: 17.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 226..247
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 169..190
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 132..153
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 198..218
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 130..158
score: 9.431686
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 167..195
score: 12.79855
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 224..252
score: 10.117529
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 196..223
score: 15.271738
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 196..219
e-value: 1.5E-11
score: 45.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 119..195
e-value: 6.5E-11
score: 44.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 220..255
e-value: 9.8E-9
score: 36.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..84
NoneNo IPR availablePANTHERPTHR24393ZINC FINGER PROTEINcoord: 112..251
NoneNo IPR availablePANTHERPTHR24393:SF87FI17950P1coord: 112..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..256
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 164..199
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 190..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:193526..194965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6946.t1Ggra6946.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 193526..194965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6946.t1 ID=Ggra6946.t1|Name=Ggra6946.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=257bp
LSPSRPCFKSKVYMLPIPLPCFFPSALLASKSPRYPTAMDLSHIVHGLKP
KVETRANSPPHARSRPSSPQPRQAVSSSSSAAPRPAAARTACVPSHSNQV
GRSASSRAPADHSPSQPAPTAVGSASGSVLTCDKCPRTFASRVQFDQHIS
VFHARSRVPSRQREANFVCSYCGKKFTSPSKRTLHVNATHMGLKPYQCET
CSKSFGYKGDLGKHRVSHSGEKPYSCYICGAKFARNFYVKRHIETIHEKK
NGSSSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf