Ggra6941.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6941.t1
Unique NameGgra6941.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
BLAST of Ggra6941.t1 vs. uniprot
Match: A0A2V3IS14 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS14_9FLOR)

HSP 1 Score: 288 bits (736), Expect = 5.020e-97
Identity = 134/187 (71.66%), Postives = 159/187 (85.03%), Query Frame = 0
Query:    1 MSSKRLTPELAPGMAPSADYFIKLIAPYKGTISLLPFLFFSVEALIAVICSQVYGDSDWLLKFSFSQLLAINMVFAGVLHFHGPLYEFYTSMIFVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFTSPPLPRPF 187
            MSSK  +PE APGM+PS+ YF+K +AP K   SLLPFL FS+E L+AVICS +Y D+DWLLKF+FSQLLAIN VFAG+LHF+ PLYEFYTSMIFVPFKDFWLYS G +++FGG G+VFA TQVL+AY L  VL+VMFPGN+ACVF EKPR+LVCN S+IGA+LRLP+Q +FI WA WFT+PPLP PF
Sbjct:    1 MSSKHFSPEFAPGMSPSSQYFVKRLAPCKDVASLLPFLMFSLEGLVAVICSYIYQDTDWLLKFTFSQLLAINTVFAGILHFYKPLYEFYTSMIFVPFKDFWLYSTGFVLMFGGFGLVFANTQVLAAYALAGVLIVMFPGNIACVFLEKPRKLVCNDSLIGAVLRLPMQLVFIRWALWFTTPPLPPPF 187          
BLAST of Ggra6941.t1 vs. uniprot
Match: R7QI74 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI74_CHOCR)

HSP 1 Score: 228 bits (580), Expect = 2.870e-73
Identity = 110/183 (60.11%), Postives = 134/183 (73.22%), Query Frame = 0
Query:    4 KRLTPELAPGMAPSADYFIKLIAPYKGTISLLPFLFFSVEALIAVICSQVYGDSDWLLKFSFSQLLAINMVFAGVLHFHGPLYEFYTSMIFVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFTSPPLPRP 186
            KRLTPELAPG   SA+ F K + PYK  I+ LPFL F +E+L+A  C   + D+D +LKF F QLLAIN   AG+LHF  P+Y+FYTSMIF+P KDFWLYS G  +I GG+GI F  TQV +A+CL+A+L++MFPGNVACVF E PR++V  GS   AI RLP Q  F+ WA WFTSPPLP P
Sbjct:    5 KRLTPELAPGELGSAEQFAKFLTPYKAVITPLPFLCFVLESLVAAGCFYFHRDTDAMLKFMFGQLLAINTTMAGLLHFFPPMYQFYTSMIFLPLKDFWLYSTGAALIAGGVGITFTKTQVYAAWCLVAILILMFPGNVACVFMEHPRKIVSGGSKTAAIARLPFQIPFVLWAFWFTSPPLPMP 187          
BLAST of Ggra6941.t1 vs. uniprot
Match: DoxX family membrane protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI00168357E7 (DoxX family membrane protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI00168357E7)

HSP 1 Score: 69.7 bits (169), Expect = 7.100e-12
Identity = 39/113 (34.51%), Postives = 63/113 (55.75%), Query Frame = 0
Query:   69 LAINMVFAGVLHFHGPLYEFYTSMIFVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFTSP 181
            LA++MV AG+LHF  P         F+PF    +Y +G+I I  G+G++  P Q L+A  L+ + + ++P N+     +     + + + +   LRLP QF+ IAWA W+T P
Sbjct:   19 LAVSMVAAGLLHFVIPAQFIKIVPGFLPFPAALVYGSGVIEILLGIGLLIPPVQRLAAIGLVVLFIAVYPANINMAVNQIHITGLPDQNWLFHALRLPFQFVLIAWAYWYTRP 131          
BLAST of Ggra6941.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Desulfoluna sp. ASN36 TaxID=2810562 RepID=UPI001F19BEEE (hypothetical protein n=1 Tax=Desulfoluna sp. ASN36 TaxID=2810562 RepID=UPI001F19BEEE)

HSP 1 Score: 68.6 bits (166), Expect = 1.420e-11
Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 0
Query:   69 LAINMVFAGVLHFHGPLYEFYTSMIFVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFTSPPLPRPF 187
            L + M++AGV HF  P++       F+PF++  +  +GL+ IF G+ ++    + L A  +MA+LV+  P +VA V ++ P      GS   A++RLPIQ LFI WA W  S   PR F
Sbjct:   12 LGLFMIYAGVSHFLKPVFYLPFVPEFLPFREAIVILSGLLEIFLGVAVLLPRYRHLGALSIMALLVLFLPVHVADVIRDTP----AIGSHGAALVRLPIQVLFIFWA-WVASRYAPRTF 125          
BLAST of Ggra6941.t1 vs. uniprot
Match: A0A2E7CVS5 (DoxX family protein n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2E7CVS5_9FLAO)

HSP 1 Score: 68.6 bits (166), Expect = 1.520e-11
Identity = 35/112 (31.25%), Postives = 70/112 (62.50%), Query Frame = 0
Query:   68 LLAINMVFAGVLHFHGPLYEFYTSMI--FVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKW 177
            LL+I  V+ G  HF+ P  +F+ +++  ++P+    +Y +G   IF G+G+    T+  SA+ ++A+L+ ++P N+   F E+P++ +   + + + +RLP+QF+ IA+A W
Sbjct:   11 LLSIGYVYVGFRHFYDP--DFFLAIMPPYLPYHLPLVYISGAFEIFLGIGLCLKKTRKYSAWGIIALLLAVYPANIYLAFNEEPQQAIDISAFLASWVRLPLQFVLIAFAYW 120          
BLAST of Ggra6941.t1 vs. uniprot
Match: A0A2W7BPE3 (Uncharacterized protein n=5 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A2W7BPE3_9CYAN)

HSP 1 Score: 67.8 bits (164), Expect = 3.060e-11
Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 0
Query:   62 KFSFSQLLAINMVFAGVLHFHGPLYEFYTSMI--FVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFTSPPLPR 185
            K +   +LA+ M+ AGVLHF  P  E +  ++  F+P     +Y +G+I I  G+G++    +  SA+ L+A+ + +FP N+           + N     AI RLP QF+ IAWA W+T P LP+
Sbjct:    8 KATLRGILAVCMIVAGVLHFAQP--EPFIRIVPGFLPAPAALVYISGVIEIMLGIGLLVPALRQTSAWGLVALFIAVFPANLNMAINHIQIEGIPNTWWFQAI-RLPFQFVLIAWAYWYTRPDLPQ 130          
BLAST of Ggra6941.t1 vs. uniprot
Match: A0A845YLC2 (DoxX family membrane protein n=1 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YLC2_9CYAN)

HSP 1 Score: 66.2 bits (160), Expect = 1.530e-10
Identity = 40/113 (35.40%), Postives = 64/113 (56.64%), Query Frame = 0
Query:   68 LLAINMVFAGVLHFHGPLYEFYTSMIFVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFTS 180
            +LA+ M+ AG+ HF  P         F+P+    +Y +G+I I  G+G++   T+ LSA+ L+A+L+ ++P N+   F       V +G    AI RLP QF+ +AWA W+T 
Sbjct:   19 VLAVCMIVAGIFHFVTPQPFIKIVPNFLPYPAAIVYISGIIEILLGIGLLVPLTRQLSAWGLVALLIAVYPANLNMAFNHIHIDGVPDGWWFQAI-RLPFQFVLVAWAYWYTD 130          
BLAST of Ggra6941.t1 vs. uniprot
Match: A0A6I5P057 (DoxX family membrane protein n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5P057_9CYAN)

HSP 1 Score: 65.5 bits (158), Expect = 2.310e-10
Identity = 41/116 (35.34%), Postives = 64/116 (55.17%), Query Frame = 0
Query:   68 LLAINMVFAGVLHFHG--PLYEFYTSMIFVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFTSP 181
            +LA+ M+ AGVLHF    P  +      F+PF    +Y +G+I I  G+G++    Q LSA+ L+A+ + ++P N+           + +   + AI RLP QF+ IAWA W+T P
Sbjct:   15 VLAVCMIVAGVLHFAATAPFVKIVPG--FLPFPTALVYISGVIEIALGIGLLIPAVQQLSAWGLVALFIAVYPANINMAVNHIQIDGIPDAWWVQAI-RLPFQFVLIAWAYWYTRP 127          
BLAST of Ggra6941.t1 vs. uniprot
Match: A0A7Y2DZ16 (DoxX family membrane protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7Y2DZ16_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 2.460e-10
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 0
Query:   61 LKFSFSQLLAINMVFAGVLHFHGPLYEFYTSMI--FVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFT 179
            LK     +L I  + AG+ HF  P  EFY +++  ++P+  F +Y +G + I  GL ++    Q +SA+ L+A+L+ +FP N+           +   + I   LRLPIQF+ IAWA W+T
Sbjct:    4 LKLILKWILGIAFIAAGINHFINP--EFYLNIMPPYLPWHLFLVYLSGFMEIVLGLMLLIPKLQKISAWALIALLLAVFPANIHMALNTDHYPEI---NPILIFLRLPIQFVIIAWAYWYT 119          
BLAST of Ggra6941.t1 vs. uniprot
Match: A0A4V0X577 (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A4V0X577_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 3.910e-10
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 0
Query:   68 LLAINMVFAGVLHFHGPLYEFYTSMI--FVPFKDFWLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPRRLVCNGSMIGAILRLPIQFLFIAWAKWFTS 180
            LLA+ M+FAG++HF  P   FY   I  F+P K F  Y AG+I +  G+G++    Q ++   +  +++   P +V  VF+EKP      GS   AI+R+P+QF+ I W  W+ S
Sbjct:    7 LLAVFMIFAGIMHFVKP--RFYNRFIPDFIP-KLFANYLAGIIEVLLGIGLLIPQYQQMAGKGMFYLMLFFLPIHVLDVFKEKP----AIGSKKLAIIRIPVQFILIYWT-WYLS 113          
The following BLAST results are available for this feature:
BLAST of Ggra6941.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IS145.020e-9771.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI742.870e-7360.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
DoxX family membrane protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI00168357E77.100e-1234.51DoxX family membrane protein n=1 Tax=Pseudanabaena... [more]
hypothetical protein n=1 Tax=Desulfoluna sp. ASN36 TaxID=2810562 RepID=UPI001F19BEEE1.420e-1137.82hypothetical protein n=1 Tax=Desulfoluna sp. ASN36... [more]
A0A2E7CVS51.520e-1131.25DoxX family protein n=1 Tax=Crocinitomicaceae bact... [more]
A0A2W7BPE33.060e-1134.92Uncharacterized protein n=5 Tax=Cyanobacteria/Mela... [more]
A0A845YLC21.530e-1035.40DoxX family membrane protein n=1 Tax=Symploca sp. ... [more]
A0A6I5P0572.310e-1035.34DoxX family membrane protein n=1 Tax=Leptolyngbya ... [more]
A0A7Y2DZ162.460e-1034.71DoxX family membrane protein n=1 Tax=Pyrinomonadac... [more]
A0A4V0X5773.910e-1037.39Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 146..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 152..174
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 100..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:185607..186170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6941.t1Ggra6941.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 185607..186170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6941.t1 ID=Ggra6941.t1|Name=Ggra6941.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MSSKRLTPELAPGMAPSADYFIKLIAPYKGTISLLPFLFFSVEALIAVIC
SQVYGDSDWLLKFSFSQLLAINMVFAGVLHFHGPLYEFYTSMIFVPFKDF
WLYSAGLIMIFGGLGIVFAPTQVLSAYCLMAVLVVMFPGNVACVFQEKPR
RLVCNGSMIGAILRLPIQFLFIAWAKWFTSPPLPRPF*
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