Ggra6927.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6927.t1
Unique NameGgra6927.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length643
Homology
BLAST of Ggra6927.t1 vs. uniprot
Match: A0A2V3IHN6 (DNA polymerase epsilon catalytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHN6_9FLOR)

HSP 1 Score: 787 bits (2033), Expect = 6.640e-273
Identity = 449/749 (59.95%), Postives = 504/749 (67.29%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGMSECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQRDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRS--------------------ENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTD-----------------------------------DVTDNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRG-----------------------------------------------TRFLGAIGKLA-------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARISGKALRDAMDDTAKLGIDDIEDLPVGAWTTARVAKRRAKTVVTRRLRNERETFKKTRTTGVHPDELVLRSKAKDPGERATQGRNAMLQFTRASHSDIRLDYAGWVRFAKRVCRAQRAIRVQRYARKRTIAQVTGDEAEPHTDEE 640
            MY NIILTNRLQP+A+V+PAQCAACDFNGMSECQR MEWTWRGE Y AS GEAEMIQRRT  EQR  ELRA+ EAAKS   N  + +       R  P   P   +  SA+ +FNDEEA     +RS                    +  TICQ ENP YVDTVR FR+RRYEYK LLKK+KKLK EAK+  D+ A+K AEKLVVLYDSLQLAHKCILNS+YGYV RKGARWY MEMAG+VTNTG LIIRRAREFI+KVGLPLELDTD                                   DV  NF+N QY DLVD ET EYEQR ECSI+FEVDGPYRAMVLPASLEEGKSIKKRYAVFND GSL ELKGFE KR GELKLIK+FQ EIF RFL G                                                 +L A  K         M EFL +  VK+KGLA  YVI R PEDTQVTS AIPV+IFEFQKEVV RRLLKKW K ADN+GL LRELL WDYY+GRLANA+LKIVSIPAALQAVEN VPRIEYP WLVKKC+EL DV K QKLSSFF  LPKG RA++S K+LRDA +DT KL I+DIEDLPV +WT+AR+A+RRA+  VTRRLR  ++  K+T   GVHPDEL+LR K  D   RAT+ RN M    R+SH DIR DY+GW+R+AKR+ RAQR IR +RYA+KR I +V G +    T+ E
Sbjct:  341 MYPNIILTNRLQPHAVVSPAQCAACDFNGMSECQRDMEWTWRGEFYPASRGEAEMIQRRTAHEQRQTELRASEEAAKSKSPNKHEEQAKSPPFNRDRPS--PYRNKGRSAVASFNDEEARKNVLLRSRLKEYCRRNYRKTLDTRVEPKTATICQRENPFYVDTVRAFRDRRYEYKALLKKQKKLKAEAKESGDIEALKRAEKLVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVTNTGGLIIRRAREFIEKVGLPLELDTDGIWCVLPNSFPENFSFTTKSGKKCSFNYICSVFNADVAANFSNRQYQDLVDAETSEYEQRTECSIMFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDGGSLAELKGFEIKRRGELKLIKEFQKEIFGRFLEGGSIFECYKEVGLTCNKWLDILTSKGEGLSDAQLLELLVEQNNMSKPLQEYLQAGQKSCSITCASRMQEFLGSVIVKDKGLAATYVIGRKPEDTQVTSRAIPVKIFEFQKEVVWRRLLKKWTKSADNEGLALRELLDWDYYKGRLANAILKIVSIPAALQAVENPVPRIEYPAWLVKKCRELTDVRKQQKLSSFFRPLPKGHRAQVSMKSLRDAAEDTDKLAIEDIEDLPVASWTSARIAQRRARAAVTRRLRRAQDIRKRT---GVHPDELLLRIKVGDSNMRATEARNRMPNLLRSSHPDIRSDYSGWLRYAKRIWRAQRLIRTERYAQKRRIHEVQGRDEASDTEHE 1084          
BLAST of Ggra6927.t1 vs. uniprot
Match: A0A2V3IPH9 (DNA-directed DNA polymerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPH9_9FLOR)

HSP 1 Score: 801 bits (2068), Expect = 1.880e-263
Identity = 455/751 (60.59%), Postives = 508/751 (67.64%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGMSECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQRDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRS--------------------ENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTD-----------------------------------DVTDNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRG-----------------------------------------------TRFLGAIGKLA-------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARISGKALRDAMDDTAKLGIDDIEDLPVGAWTTARVAKRRAKTVVTRRLRNERETFKKTRTTGVHPDELVLRSKAKDPGERATQGRNAMLQFTRASHSDIRLDYAGWVRFAKRVCRAQRAIRVQRYARKRTIAQVTGDEAEPHTDEERG 642
            MY NIILTNRLQP+A+VTPAQCAACDFNGMSECQR MEWTWRGE Y AS GEAEMIQRRT  EQR  ELRA+ EAAKS   N  + +       R  P   P   + SSA+ +FNDEEA      RS                    +  TICQ ENP YVDTVR FR+RRYEYK LLKK+KKLK EAK+  D+ A+K AEKLVVLYDSLQLAHKCILNS+YGYV RKGARWY MEMAG+VTNTG LIIRRAREFI+KVGLPLELDTD                                   DV  NF+N QY DLVD ET EYEQR ECSI+FEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSL ELKGFE KR GELKLIK+FQ EIF RFL G                                                 +L A  K         M EFL +  VK+KGLA  YVI R PEDTQVTS AIPV+IFEFQKEVVRRRLLKKW K ADN+GL LRELL WDYY+GRLANA+LKIVSIPAALQAVEN VPRIEYP WLVKKC+EL DV K QKLSSFF  LPKG RA++S K+LRDA +DT KL I+DIEDLPV +WT+AR+A+RRA+  VTRRLR  ++  K+T   GVHPDEL+LR K  DP  RAT+ RN ML   R+SH DIR DY+GW+R+AKR+ RAQR IR +RYA+KR I +V   +    T+ E G
Sbjct:  668 MYPNIILTNRLQPHAVVTPAQCAACDFNGMSECQRDMEWTWRGEFYPASRGEAEMIQRRTAHEQRQTELRASEEAAKSKSPNKHEEQAKSPPFNRDRPS--PYRNKGSSAVASFNDEEARKNVLFRSRLKEYCRRNYRKTLDTRVEPKTATICQRENPFYVDTVRAFRDRRYEYKALLKKQKKLKAEAKESGDIEALKRAEKLVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVTNTGGLIIRRAREFIEKVGLPLELDTDGIWCVLPKSFPENFSFTTKSGKKCSFNYICSVFNADVAANFSNRQYQDLVDAETLEYEQRTECSIMFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLAELKGFEIKRRGELKLIKEFQKEIFGRFLEGGSIFECYKEVGLTCNKWLDILTSKGEGLSDAQLLELLVEQNNMSKPLQEYLQAGQKSCAITCASRMQEFLGSAIVKDKGLAATYVIGRKPEDTQVTSRAIPVKIFEFQKEVVRRRLLKKWTKSADNEGLALRELLDWDYYKGRLANAILKIVSIPAALQAVENPVPRIEYPAWLVKKCRELTDVRKQQKLSSFFRPLPKGHRAQVSMKSLRDAAEDTDKLAIEDIEDLPVASWTSARIAQRRARAAVTRRLRRAQDIRKRT---GVHPDELLLRIKVGDPNMRATEARNRMLNLLRSSHPDIRSDYSGWLRYAKRIWRAQRLIRTERYAQKRRIHEVQERDEASDTEHEGG 1413          
BLAST of Ggra6927.t1 vs. uniprot
Match: R7QE00 (DNA polymerase epsilon catalytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE00_CHOCR)

HSP 1 Score: 636 bits (1641), Expect = 2.770e-203
Identity = 368/716 (51.40%), Postives = 442/716 (61.73%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGMSECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQRDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPV--KDPKTTRDSSAIPNFNDEEAHGGDQIRSENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTD-----------------------------------DVTDNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRFLGAIGKLA------------------------------------------------------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARISG--KALRDAMDDTAKLGIDDIEDLPVGAWTTARVAKRRAKTVVTRRLRNERETFKKTRTTGVHPDELVLRSKAKDPGERATQGRNAMLQFTRASHSDIRLDYAGWVRFAKRVCRAQRAIRVQRYARKR 623
            MY NIILTNRLQP+A+VTPAQCAACDFNGMSECQR MEWTWRGE Y AS GEAEMIQRR    +R    + A ++A  A   D++ R  + +RKR       + + T+++  +                +  T+CQ ENP YVDTVR FRNRRYEYK LLKK+KKL+ +AK+  D   IK  + LVVLYDSLQLAHKCILNS+YGYV R+GARWY MEMAG+VTNTG LIIRRAREFI+KVGLPLELDTD                                   DV  NFTNHQY DLV+ +TFEYEQR ECSILFEVDGPY+AMVLPASLEEGK+IKKRYAVFNDDGSL ELKGFE KR GELKLIK+FQGEIF RFL G        K+                                                       + EFL +  VK+KGLA  YVIAR PE+TQVT  AIPV+IF+F  EVV+R+LL+KW K  D++ L+LR LL W+YY+GRLANA+LKIV+IPAALQAV+N VPR+EYP WLVKKC+EL D  K Q + SFF ++PKG++A I G   +L D +  T KL +DDIED+P+ +WT A++A R+A+ VV                                      + R+ +LQ     H +   DYAGW+R+AK + RAQRA RV R   KR
Sbjct:  638 MYPNIILTNRLQPHAMVTPAQCAACDFNGMSECQRDMEWTWRGEFYPASRGEAEMIQRRPESNRRGR--KNAPDSAGLASFEDEESRKNVHFRKRLKEYCRTNYRKTQETRVV---------------DKTATVCQRENPFYVDTVRAFRNRRYEYKALLKKQKKLRSKAKEGGDPEEIKRTDNLVVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGIVTNTGGLIIRRAREFIEKVGLPLELDTDGIWCVLPVSFPENFTFQTKSGKDYSISYICSVFNSDVAANFTNHQYQDLVNKDTFEYEQRSECSILFEVDGPYKAMVLPASLEEGKTIKKRYAVFNDDGSLAELKGFEIKRRGELKLIKEFQGEIFSRFLEGRTLSECYEKVGETCNKWFDVLATKGEGMTDAGILELLVEQNNMSKPLSDYIIAGQKSCAITCATRLKEFLGSAIVKDKGLAATYVIARKPEETQVTGRAIPVKIFDFPNEVVKRKLLRKWTKNGDDENLKLRNLLDWEYYKGRLANAILKIVTIPAALQAVDNPVPRVEYPAWLVKKCRELRDKRKQQSVMSFFKSMPKGEKA-IPGVRNSLLDNITHTEKLSMDDIEDMPLSSWTAAKIANRKARAVV--------------------------------------ETRDHLLQLFHQPHPNKHDDYAGWLRYAKNIWRAQRAARVYRSGLKR 1297          
BLAST of Ggra6927.t1 vs. uniprot
Match: A0A1E1XEY7 (DNA polymerase epsilon catalytic subunit (Fragment) n=2 Tax=Amblyomma TaxID=6942 RepID=A0A1E1XEY7_9ACAR)

HSP 1 Score: 418 bits (1075), Expect = 5.590e-126
Identity = 264/611 (43.21%), Postives = 339/611 (55.48%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGM-SECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQRDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRSE--NGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTDDV--------TDNF-----------------------------TNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRF---LGAIGKLA-------------------------------------------------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARISGKALRDAMDDTAKLGIDDIEDL 519
            MY NIILTNRLQP+A+V  A CAACDFN   + C+R M WTWRG++  AS  E + IQ     +Q + E    AE               + +R  H+  ++ +   +   + ++  +        R+E    TICQ EN  YVDTVR FR+RRY++K LLK  KK   EA    D   IK A+ L VLYDSLQLAHKCILNS+YGYV RKGARWY MEMAG+V +TGA II  ARE ++++G PLELDTD +         +NF                             TN QY +LV+PET EY QR E SI FEVDGPY AM+LPAS EEGK +KKRYAVFN DGSL ELKGFE KR GEL+LIK FQ  +FE FL+G        A+ K+A                                                 + EFL  + VK+ GL+  YVI++ PE   VT  AIP+ IF+ +  V +R  L++WLK    D  ++R +L W+YY  RL +A+ KI++IPAALQ V N VPR+ +PPWL K+  E  DV+K +++S  F+A PK Q       A   A +DTA++   DIE+L
Sbjct:  114 MYPNIILTNRLQPSAMVDEADCAACDFNKPGATCRRSMPWTWRGQYMPASRAEFQRIQ-----QQLETERFPPAEPG-------------MPFRAFHALSREERAAAEKKRLADYCRKAYKKVHITRTELRETTICQKENSFYVDTVRNFRDRRYDFKALLKVAKKKVSEAVGKGDAAEIKSAKNLEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGAGIITHARELVEQIGRPLELDTDGIWCMLPASFPENFVIRTSNAKKPKLTISYPGAMLNIMVQEHNTNDQYHELVNPETLEYVQRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGKTLEECYAAVAKVADYWLDVLYSKAENMPDEELFDLISENRSMSRKLEDYGVQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISKKPEGAPVTERAIPLAIFQAEPSV-KRHYLRRWLKTTTTDDFDIRLILDWEYYIERLGSAIQKIITIPAALQQVPNPVPRVAHPPWLHKRLLEKNDVLKQKRISELFTAAPKQQ-------AQESAPEDTAEMA--DIEEL 696          
BLAST of Ggra6927.t1 vs. uniprot
Match: A0A6P5A3T4 (DNA polymerase epsilon catalytic subunit n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A3T4_BRABE)

HSP 1 Score: 421 bits (1081), Expect = 7.100e-126
Identity = 268/623 (43.02%), Postives = 335/623 (53.77%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGM-SECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQ-----RDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRSENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTD-------------------------------------DVTDNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRFLGAIGKLA----------------------------------------------------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARISGKALRDA--MDDTAKLGIDDIEDLPVGAWTT 526
            MY NIILTNRLQP+A+V    CAACDFN   + CQR MEWTWRGE+  AS  E   IQ++   EQ          RA  E  K  +   + +R     +K +  V     TR                  +     TICQ EN  YVDTVR FR+RRYE+KGLLK  KK   EA +  +   IK A+ + +LYDSLQLAHKCILNS+YGYV RKGARWY MEMAG+V  TGA II +ARE ++++G PLELDTD                                      V D+FTNHQY +LV+P T +Y+QR E SI FEVDGPY AMVLPAS EEGK +KKRYAVFN DG+L ELKGFE KR GEL+LIK FQ  +FE FL+G+        +A                                                    + EFL  + VK+KGL+  ++I+R PE   VT  AIP+ IF+ +  V ++  LKKWLK       ++R +L W YY  RL N + KI++IPAALQ V+N VPR+ +P WL KK  E  DV K Q++S  F+ LPK +R +    A  D    +D     I D+ED+  G  TT
Sbjct:  620 MYPNIILTNRLQPSAMVDEVTCAACDFNKPGATCQRKMEWTWRGEYMPASRNEYHRIQQQLEHEQFPPFKPGGRQRAFHELTKEEQAGAEKKRLADYCKKAYKKV---HVTR------------------VEDRETTICQRENSFYVDTVRAFRDRRYEFKGLLKVWKKKVAEALKKGEAADIKRAKGMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCLTGARIITQARELVEQIGRPLELDTDGIWCILPASFPENYIIHTTNTKKPKVTISYPGAMLNIQVKDDFTNHQYQELVNPATLQYQQRSENSIFFEVDGPYLAMVLPASKEEGKKLKKRYAVFNFDGTLAELKGFEVKRRGELQLIKIFQSSVFESFLKGSTLEDCYASVATVADYWLDVLFSKACDMPDEELFNLISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDKGLSCRFIISRKPEGAPVTERAIPLAIFQAEPSV-KKHYLKKWLKSNSITDFDIRNILDWGYYIERLGNTIQKIITIPAALQQVKNPVPRVAHPDWLHKKLLEKNDVFKQQRISEMFAPLPK-KRIQEEDTAFEDGDNSNDGTSNNIADMEDM-AGPRTT 1218          
BLAST of Ggra6927.t1 vs. uniprot
Match: A0A7E6EV30 (DNA polymerase epsilon catalytic subunit n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6EV30_OCTVU)

HSP 1 Score: 418 bits (1075), Expect = 4.380e-125
Identity = 266/623 (42.70%), Postives = 338/623 (54.25%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGM-SECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQ-----RDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRSENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTDD-------------------------------------VTDNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRF---LGAIGKLA-------------------------------------------------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARISGKALRDAMDDTAKLGIDDIEDLPVGAWTTAR 528
            MY NIILTNRLQP+A+V    CAACDFN   + CQR M W WRGE+  A+  E + IQ++   E+      D   RA  +     +   + +R     RK +  V     TR    +                   TICQ EN  YVDTVR FR+RRYE+KGL+K  K+   EA+  +D   IK A  +VVLYDSLQLAHKCILNS+YGYV RKGARWY MEMAG+V  TGA II +ARE ++++G PLELDTD                                      V + FTNHQY +LVDP+  +YE R E SI FEVDGPY AM+LPAS EEGK +KKRYAVFN DGSL ELKGFE KR GEL+LIK FQ  +FE FL+G        A+ K+A                                                 + EFL  + +K+ GL+  YVI++ PE + VT  AIP+ IF+ +  + +R  LKKWLK ++ D L++R++L W YY  RL  AV KI++IPAALQ V N VPRI +P WL KK  E  D+ K +K+S  F+  PK Q   +      D++ D   LG+    ++PV A  T R
Sbjct:  618 MYPNIILTNRLQPSAMVDEEICAACDFNKPGATCQRKMTWMWRGEYMPATRSEFQRIQQQLENEKFPPFFPDGPQRAFHQLPAVEQAAIEKKRLAEYCRKAYKKV---HVTRKGEKV------------------ATICQRENSFYVDTVRAFRDRRYEFKGLVKVWKRKLGEAEAAKDATEIKRANGMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITKAREIVEQIGRPLELDTDGIWCVLPATFPENYVVKTTHPKKAKLTISYPGAMLNVMVQNEFTNHQYQELVDPDALKYEVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGITLEECYSAVSKVADYWLDVLYNKAANMPDSELFELIAENRSMSRKLEDYGQQKSTSISTAKRLAEFLGDQMIKDAGLSCRYVISKKPEGSPVTERAIPMAIFQAEPGI-KRHFLKKWLKTSNKD-LDIRDILDWQYYIDRLGGAVQKIITIPAALQQVANPVPRIPHPDWLQKKLLERTDIFKQKKISEIFAPQPKPQEPEV------DSIGDIEDLGVPAKPNMPVRATVTKR 1211          
BLAST of Ggra6927.t1 vs. uniprot
Match: A0A224YVU0 (DNA polymerase epsilon catalytic subunit n=3 Tax=Rhipicephalus TaxID=426455 RepID=A0A224YVU0_9ACAR)

HSP 1 Score: 417 bits (1073), Expect = 7.990e-125
Identity = 267/614 (43.49%), Postives = 339/614 (55.21%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGM-SECQRYMEWTWRGEHYLASYGEAEMIQRRTTQE-----QRDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRSENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTDDV--------TDNF-----------------------------TNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRF---LGAIGKLA-------------------------------------------------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARISGKALRDAMDDTAKLGIDDIEDL 519
            MY NIILTNRLQP+A+V  A CAACDFN   + C+R M WTWRGE+  AS  E + IQ++   E     Q     RA  E ++      + +R     RK +  V   +T                   ++R    TICQ EN  YVDTVR FR+RRYE+K LLK  KK   EA    D   IK A+ L VLYDSLQLAHKCILNS+YGYV RKGARWY MEMAG+V +TGA II  ARE ++++G PLELDTD +         +NF                             TN QY +LV+PET EY QR E SI FEVDGPY AM+LPAS EEGK +KKRYAVFN DGSL ELKGFE KR GEL+LIK FQ  +FE FL+G        A+ K+A                                                 + EFL  + VK+ GL+  YVI++ PE   VT  AIP+ IF+ ++ V +R  L++WLK A  +  ++R +L W+YY  RL +A+ KI++IPAALQ V N VPR+ +PPWL K+  E  DV+K +++S  F+A PK Q    +        +D+A++   DIEDL
Sbjct:  626 MYPNIILTNRLQPSAMVDEADCAACDFNKPGATCRRSMPWTWRGEYMPASRAEFQRIQQQLETERFPPAQPGMPFRAFHELSREERAAAEKKRLADYCRKAYKKVHITRT-------------------EVRET--TICQKENSFYVDTVRNFRDRRYEFKALLKVAKKKVSEAVSKGDAAEIKSAKNLEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGAGIITHARELVEQIGRPLELDTDGIWCVLPASFPENFVIRTSNAKKPKLTISYPGAMLNIMVQEHNTNDQYHELVNPETLEYVQRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGKTLEECYAAVAKVADYWLDVLYSKAGNMPDEELFELISENRSMSRKLEDYGVQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISKKPEGAPVTERAIPLAIFQAEQSV-KRHYLRRWLKTASVEDFDIRTILDWEYYIERLGSAIQKIITIPAALQQVPNPVPRVAHPPWLHKRLLEKNDVLKQKRISELFTAAPKQQPQPATA-------EDSAEMA--DIEDL 1208          
BLAST of Ggra6927.t1 vs. uniprot
Match: M1VKI4 (DNA polymerase epsilon catalytic subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VKI4_CYAM1)

HSP 1 Score: 417 bits (1071), Expect = 1.430e-124
Identity = 267/584 (45.72%), Postives = 319/584 (54.62%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGMSECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQRDAELRAAAEAAKSAENNDDDRRDTLRYRKR--------HSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRSENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTD------------DVT-----------------------DNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRFL---GAIGKLA---------------------------------------------------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSA 487
            MY NIILTNRLQP+A VT   CAACDFNG S+C+R M W WRGE Y A+ GE + I        R + L       +  E   DD  + + YRKR        H  V +P                      +++    ICQ ENP YVDTVR FR+RRYEYK LLK+ +K   E+      GA   A  + ++YDS+QLAHKCILNS+YGYV R+ ARWY MEMAGVVT TGA IIR ARE+I++VGLPLELDTD            D+T                         +TNHQY +   P+   Y+QR E SI FE+DGPYRAMVLPAS EEGKSIKKRYAVF  DGSL E+KGFE KR GELKLIK  Q EIF RFL G+       A+G+ A                                                   + EFL  + V++KGLA  YVIAR P  TQVT  AIPVQIF    E  R+ LL+KWL+         RE+L WDYY+GRLAN V +I+SIPAA Q V N VPRIE+P WL ++ ++LA   K   L SFF A
Sbjct:  641 MYPNIILTNRLQPHACVTRETCAACDFNGTSDCRRKMHWVWRGECYPATIGEVQSI--------RASVLTTVRARRRQGEKVSDDDAEAM-YRKRLREYCMKVHKRVLEPT---------------------VQTREAWICQRENPFYVDTVRAFRDRRYEYKRLLKQWRKALAESG-----GASIEARNMCIVYDSMQLAHKCILNSFYGYVMRRAARWYSMEMAGVVTQTGASIIRLAREWIERVGLPLELDTDGIWCAIPATFPNDITLHTRSGREISISLLCTVLNTKVAAQYTNHQYQEW-SPDEGTYKQRSEFSIFFEIDGPYRAMVLPASREEGKSIKKRYAVFQRDGSLAEIKGFELKRRGELKLIKVLQSEIFGRFLEGSTLAECYAAVGETANLWLDVLDSNGGLLSDAELLELVAEQTHMSKPLAAYIQAGQKSSAITCAKRIQEFLGKDMVRDKGLACRYVIARYPLGTQVTERAIPVQIFSADLEQ-RQALLRKWLR---EPVYNFREILDWDYYRGRLANTVQRIISIPAACQGVPNPVPRIEHPDWLRRRLRDLACAQKQTTLKSFFRA 1184          
BLAST of Ggra6927.t1 vs. uniprot
Match: DNA polymerase epsilon catalytic subunit A n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C6939 (DNA polymerase epsilon catalytic subunit A n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C6939)

HSP 1 Score: 416 bits (1069), Expect = 2.640e-124
Identity = 261/592 (44.09%), Postives = 329/592 (55.57%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGMS-ECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQRDAE-----LRAAAEAAKSAENNDDDRRDTLRYRKRHSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRSENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTDD-------------------------------------VTDNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRF---LGAIGKLA-------------------------------------------------MHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARIS 497
            MY NIILTNRLQP A+V    CAACDFNG + ECQR M W WR E+  AS  E   IQ++   E+   +     +RA  + +K  + + + +R T+  RK +   K  K TR                  I   N TICQ EN  YVDTV+ FR+RRYEYK + KK K+  V+A +  D   IK A+   VLYDSLQLAHKCILNS+YGYV RKGARW+ MEMAG+V  TGA II RARE I++VG PLELDTD                                      V D FTN QY DL+D +  EYE+R E SI FEVDGPY+AMVLPAS EEGK +KKRYAVFN DGSL ELKGFE KR GEL+LIK FQ  +FE FL+G        A+ ++A                                                 + EFL  + VK+ GLA  YVI++ P+   VT  AIP+ IF+ + E V++  L+KWLK +  D +++R++L W+YY  RL  A+ KI++IPAA+Q V N VPR+ +P WL KK  E  D  K +++   FSA+PK     IS
Sbjct:  627 MYPNIILTNRLQPCAMVNETICAACDFNGPNAECQRNMAWMWRAEYMPASRNEYHRIQQQLETEKFPPQFPGGPMRAFHQLSKVDQADLEKKRLTVYCRKAY---KKAKITR------------------IEERNTTICQKENSFYVDTVKAFRDRRYEYKAMSKKAKQKVVDAIKGGDATEIKSAKSREVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVCYTGANIIMRAREIIEQVGRPLELDTDGIWCILPASFPENVTIHTIHATKKKLNISYPNTVLNAMVKDYFTNDQYFDLIDADKLEYEKRSENSIFFEVDGPYKAMVLPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEAFLKGNSLESCYAAVAQVADYWLDVLFSQGRNMPDSELFDLISENKSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLACKYVISKKPDGAPVTERAIPLAIFQAE-EAVQKHFLRKWLKDSTIDVIDIRDVLDWNYYIERLGGAIQKIITIPAAMQGVSNPVPRVRHPDWLHKKVLEKNDNFKQRRIDDMFSAMPKRTCPEIS 1196          
BLAST of Ggra6927.t1 vs. uniprot
Match: A0A7D9L4W3 (DNA polymerase epsilon catalytic subunit (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L4W3_PARCT)

HSP 1 Score: 390 bits (1001), Expect = 7.360e-124
Identity = 242/584 (41.44%), Postives = 316/584 (54.11%), Query Frame = 0
Query:    1 MYTNIILTNRLQPNAIVTPAQCAACDFNGM-SECQRYMEWTWRGEHYLASYGEAEMIQRRTTQEQ----RDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPVKDPKTTRDSSAIPNFNDEEAHGGDQIRSENGTICQGENPSYVDTVREFRNRRYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNSYYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTDD-------------------------------------VTDNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKSIKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRF---LGAIGKLAMH-------------------------------------------------EFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQKEVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQAVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPK 490
            MY NIILTNRLQP+A+V    CA CDFN   ++CQR M+W WRGE+  AS  E + I+++   E+       +   +  +  ++E    +++    Y   H   K  K T+                  +     TICQ EN  YVDTVR FR+RRYE+KG LK  KK    A    D   IK  +   VLYDSLQLAHKCILNS+YGYV RKGARWY MEMAG+V  TGA II+RARE ++++G PLELDTD                                      V + FTN QY +LVD E   Y  R E SI FEVDGPY+AM+LPA+ EEGK +KKRYAVFN+DGSL ELKGFE KR GEL+LIK FQ  +FE FL GT       A+GK+A +                                                 EFL  + VK+KGL+  ++IA+ PE + VT  AIP+ IF+ + + V+R  L++WLK       ++R +L W+YY  RL +A+ KI++IPAA+Q V N VPR  +P WL K+  E  D  + ++++  FS +PK
Sbjct:   75 MYPNIILTNRLQPSAMVDETTCARCDFNKPGAKCQRDMKWMWRGEYSPASRNEYQTIKQQLEVEKIPGLEPGDPPRSFHSLMNSERAQMEKKRLAEYC--HKAYKKTKITK------------------VEERETTICQRENSFYVDTVRAFRDRRYEFKGQLKIWKKKLSAAMDKGDAQEIKSCKSKEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCCTGASIIKRAREIVEQIGRPLELDTDGIWCILPASFPENFQVTTTHPKKSKVTISYPGAMLNIMVKNYFTNDQYQELVDREDIRYTIRSENSIFFEVDGPYKAMILPAAKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKNFQSSVFESFLLGTNLQEVYNAVGKVANYWLDVLYTQAANMPDTELCNLICENRSMSRKLEEYGSQKSTSISTAKRLAEFLGDQMVKDKGLSCKFIIAKKPEGSPVTERAIPLAIFQTE-DGVKRHYLRRWLKSPGLTNFDIRNILDWEYYIERLNSAIQKIITIPAAIQEVSNPVPRCRHPDWLHKRLLENNDKCRQRRINELFSVVPK 637          
The following BLAST results are available for this feature:
BLAST of Ggra6927.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHN66.640e-27359.95DNA polymerase epsilon catalytic subunit n=1 Tax=G... [more]
A0A2V3IPH91.880e-26360.59DNA-directed DNA polymerase n=1 Tax=Gracilariopsis... [more]
R7QE002.770e-20351.40DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
A0A1E1XEY75.590e-12643.21DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A6P5A3T47.100e-12643.02DNA polymerase epsilon catalytic subunit n=2 Tax=B... [more]
A0A7E6EV304.380e-12542.70DNA polymerase epsilon catalytic subunit n=1 Tax=O... [more]
A0A224YVU07.990e-12543.49DNA polymerase epsilon catalytic subunit n=3 Tax=R... [more]
M1VKI41.430e-12445.72DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
DNA polymerase epsilon catalytic subunit A n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C69392.640e-12444.09DNA polymerase epsilon catalytic subunit A n=1 Tax... [more]
A0A7D9L4W37.360e-12441.44DNA polymerase epsilon catalytic subunit (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..174
NoneNo IPR availableGENE3D1.10.287.690Helix hairpin bincoord: 157..212
e-value: 2.8E-10
score: 42.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..132
IPR023211DNA polymerase, palm domain superfamilyGENE3D3.90.1600.10Palm domain of DNA polymerasecoord: 213..288
e-value: 2.8E-10
score: 42.2
IPR042087DNA polymerase family B, thumb domainGENE3D1.10.132.60coord: 301..410
e-value: 2.4E-11
score: 45.8
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainPFAMPF00136DNA_pol_Bcoord: 156..239
e-value: 1.1E-9
score: 37.6
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 357..622
coord: 1..346
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..440

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:75805..78057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6927.t1Ggra6927.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 75805..78057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6927.t1 ID=Ggra6927.t1|Name=Ggra6927.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=643bp
MYTNIILTNRLQPNAIVTPAQCAACDFNGMSECQRYMEWTWRGEHYLASY
GEAEMIQRRTTQEQRDAELRAAAEAAKSAENNDDDRRDTLRYRKRHSPVK
DPKTTRDSSAIPNFNDEEAHGGDQIRSENGTICQGENPSYVDTVREFRNR
RYEYKGLLKKRKKLKVEAKQCEDVGAIKFAEKLVVLYDSLQLAHKCILNS
YYGYVKRKGARWYPMEMAGVVTNTGALIIRRAREFIDKVGLPLELDTDDV
TDNFTNHQYLDLVDPETFEYEQRGECSILFEVDGPYRAMVLPASLEEGKS
IKKRYAVFNDDGSLVELKGFETKRSGELKLIKQFQGEIFERFLRGTRFLG
AIGKLAMHEFLEAERVKEKGLATIYVIARNPEDTQVTSSAIPVQIFEFQK
EVVRRRLLKKWLKCADNDGLELRELLHWDYYQGRLANAVLKIVSIPAALQ
AVENQVPRIEYPPWLVKKCKELADVMKPQKLSSFFSALPKGQRARISGKA
LRDAMDDTAKLGIDDIEDLPVGAWTTARVAKRRAKTVVTRRLRNERETFK
KTRTTGVHPDELVLRSKAKDPGERATQGRNAMLQFTRASHSDIRLDYAGW
VRFAKRVCRAQRAIRVQRYARKRTIAQVTGDEAEPHTDEERG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023211DNA_pol_palm_dom_sf
IPR042087DNA_pol_B_thumb
IPR006134DNA-dir_DNA_pol_B_multi_dom
IPR029703POL2
IPR043502DNA/RNA_pol_sf