Ggra6925.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6925.t1
Unique NameGgra6925.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length343
Homology
BLAST of Ggra6925.t1 vs. uniprot
Match: A0A2V3IPH9 (DNA-directed DNA polymerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPH9_9FLOR)

HSP 1 Score: 491 bits (1265), Expect = 3.550e-155
Identity = 244/347 (70.32%), Postives = 283/347 (81.56%), Query Frame = 0
Query:    1 MAELSVVHLEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQRNVERNNRNAALNDMVQGGFAAPSDPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVTPGGDNWSSARS----QRHVLHDQDAEP-DVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            +A++S VHL D+SAPNHLA  +G PFLKLE RT  +L+ +RK+L+ II+RN ERN R+  + ++     A P++PLDA+++MREY VA VNRLAIDKKINVGYWY VTPGGD   + +S    + H+L DQ   P   + DPD+NEG ANDF SAHLTRL EIVERASPVV AFDIECTKKPLKFPDAEA  QVMMISWMVDG GFL INR  VSKD ++FEYRPHPE+ G FEV NEPNEK++LQRFFSEVRLAAPRVFVT+NGD+FD PF+ETRASMLGMDM  EI +RC+TDLRM +QT+GRS +H DVFHWVNRDSYL QGSRGLKAVTRVLLGFEPEEIP E
Sbjct:  133 VADISTVHLNDMSAPNHLAHLKGAPFLKLEARTLGDLFSVRKTLLPIIKRNTERNERSGPMLELQHDNMAVPANPLDAILDMREYDVAPVNRLAIDKKINVGYWYKVTPGGDTHHAHQSHQDYEEHLLRDQQQHPLATERDPDLNEGHANDFLSAHLTRLPEIVERASPVVLAFDIECTKKPLKFPDAEAGDQVMMISWMVDGNGFLAINREVVSKDIDNFEYRPHPEFHGSFEVYNEPNEKAVLQRFFSEVRLAAPRVFVTFNGDYFDWPFIETRASMLGMDMGKEISMRCQTDLRMTRQTEGRSTIHMDVFHWVNRDSYLPQGSRGLKAVTRVLLGFEPEEIPPE 479          
BLAST of Ggra6925.t1 vs. uniprot
Match: R7QE00 (DNA polymerase epsilon catalytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE00_CHOCR)

HSP 1 Score: 404 bits (1037), Expect = 1.800e-124
Identity = 209/342 (61.11%), Postives = 246/342 (71.93%), Query Frame = 0
Query:    1 MAELSVVHLEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQRNVERNNRNAALNDMVQGGFAAPSDPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVTPGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            +AE+SVV LEDIS PNHLA  EGR FLK+E RT+ +LY LR+ L  I+ RN+ER  R AA++    G    P   LDA+ ++REY VA VNRLAID+KINVGYWY V+PGGD  S+AR                                 L +L +IVERA+PVV A+DIECTKKPLKFPDAE+  +VMMISWMVDGKGFL INR  VSKD ++FEY+PH EY G FEV NE NEK+LL+RFF+E R+AAPRVFVT+NGD+FD PFVE RA++LG+DM  EIG+R   D  M K T GR+A+H DVFHWVNRDSYL QGSRGLKAVTR LLGFEPEEIP E
Sbjct:  141 VAEVSVVTLEDISMPNHLAADEGRSFLKVETRTTGDLYSLRQGLAPIVDRNLERKRRTAAIHRATGGDATTPMGALDAIEDIREYDVAPVNRLAIDQKINVGYWYKVSPGGDQSSNAR---------------------------------LEKLPDIVERAAPVVLAYDIECTKKPLKFPDAESGDEVMMISWMVDGKGFLGINREVVSKDIDNFEYKPHAEYHGEFEVFNEANEKALLERFFAETRIAAPRVFVTFNGDYFDWPFVEKRAALLGLDMGKEIGMRTNGDDMMSKVTKGRAAIHMDVFHWVNRDSYLPQGSRGLKAVTRALLGFEPEEIPPE 449          
BLAST of Ggra6925.t1 vs. uniprot
Match: A0A7S2ZS96 (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZS96_9RHOD)

HSP 1 Score: 291 bits (744), Expect = 2.080e-86
Identity = 159/338 (47.04%), Postives = 216/338 (63.91%), Query Frame = 0
Query:    5 SVVHLEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQRNVERNNRNAALNDMVQGGFAAPSDPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVTPGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            +V +LED+ APNHL++ EGRP+LK+E  T  E   LR+ L+   QR  + + +   + D  +  + A  D LD   ++REY V+ +NR+AID  +  G+WY V P G + +S               DV       E  A ++ S HL R+ EI+ERA+P V A+DIECTK+PL+FPDA+   +VMMISWM+DG GFL +NR  VS D   F Y P PE+ G F + NEP+EK+LL+RFF + R   PRV VTYNGD FD PF+E RA   G+DM +EIG +  + ++ ++    R+AVH D  +WVNRDSYL QGSRGLKAVT+VLLG++P E+  E
Sbjct:  164 TVTYLEDLDAPNHLSMREGRPYLKVESWTMKESNDLRQMLIPF-QRKNQASKKKLGVADAAELEYRAGLDLLD---DIREYDVSPLNRIAIDMNLRAGHWYRVDPDGFSGAST--------------DVTDSEGQLEKKA-EYRSVHLERVEEILERATPTVLAYDIECTKQPLRFPDADEGDKVMMISWMIDGHGFLGVNREVVSADIAPFSYTPKPEFPGDFVIFNEPDEKALLERFFEQYRANRPRVVVTYNGDNFDFPFLEKRADANGLDMYNEIGFKQTSQMQSVEYRS-RTAVHLDCLYWVNRDSYLPQGSRGLKAVTKVLLGYDPLELDPE 481          
BLAST of Ggra6925.t1 vs. uniprot
Match: A0A5J4Z272 (DNA-directed DNA polymerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z272_PORPP)

HSP 1 Score: 269 bits (688), Expect = 1.130e-77
Identity = 156/363 (42.98%), Postives = 209/363 (57.58%), Query Frame = 0
Query:    1 MAELSVVHLEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQRNVERNNR---------------NAALNDMVQGGFAAPSDPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVT------PGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            +  LS V L D+S  NHLA    R FLK+E R+S +L +L++ LM     + +R +                N   +  V  G A  +  L  + ++RE+ VA VNR+AID  +  GYWY+V        GG++ +   S   +LH  D   +        +        + L R+  I++RA P V A+DIE +K PLKFPDA +  QV+MISWM DG+G+L +NR  VS D  DFEY P   + G FE  NE +EK+LL+RFF+ VR  APR+FVTYNGD FD PFV+ RA   G+ M D+IG+  +       +  GR A+H D FHWVNRDSYL QGSRGLKAVTR LLG++P E+  E
Sbjct:  157 IVNLSHVELNDLSQLNHLASESSRAFLKVELRSSRDLTMLKRKLMPYANAHKQRQSYXXXXXXXXSSLAVTLNQRSSSGVTSGVAQHNHALSLICDIREHDVAPVNRVAIDLNVRAGYWYNVLVQPFAGAGGNSSAVNDSPLSLLHRGDTSAEHMNTNFKRQQQQQLLTCSLLERVPSILQRAVPTVLAYDIETSKAPLKFPDAHSGDQVVMISWMTDGQGYLGVNRALVSADIADFEYSPSETFRGEFECFNERDEKALLERFFASVRACAPRIFVTYNGDSFDWPFVQARAGAHGLSMWDQIGMVVD---EASGECRGRGALHLDCFHWVNRDSYLPQGSRGLKAVTRTLLGYDPLELDPE 516          
BLAST of Ggra6925.t1 vs. uniprot
Match: M1VKI4 (DNA polymerase epsilon catalytic subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VKI4_CYAM1)

HSP 1 Score: 261 bits (667), Expect = 7.140e-75
Identity = 155/351 (44.16%), Postives = 202/351 (57.55%), Query Frame = 0
Query:    4 LSVVH---LEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQRNVERNNRNAALNDMVQGGFAAPS---------DPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVTPGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            LS +H   LED+   NHLA    R FL++E  T+ +L  +R  L+S       + N +    D+     A+ S         DP + ++E+REY V  V R+ ID  I  GYWY V              H L    A P + L                   LSE+VERA+P V A+DIECTK PLKFPD  A  ++MMISWM+DG+G+L +NR+ +++D   F Y P PE++  F V NEP+E SLL+RFF+E R A PRV+VTYNGD FD  FV  RAS LG+++ D+IG+       + +   GR+AVH D  HWVNRDSYL QGSRGLKAVTR LLG+EP E+  E
Sbjct:  141 LSGIHRAELEDLDMLNHLATRARRLFLRVETFTTDDLVRIRSHLLSYANG---KQNPSLIPGDLSTDASASLSSAAQRIRRTDPYENIVELREYDVPYVTRVCIDCDIRCGYWYRV-------------EHSLSSGGAAPKLHL-------------------LSELVERANPTVLAYDIECTKAPLKFPDPYADDEIMMISWMLDGRGYLGVNRQIIAEDIHGFTYAPKPEFESSFVVFNEPDEASLLRRFFAEARAAQPRVYVTYNGDAFDWFFVHVRASRLGINILDKIGMSFSAARGLCR---GRAAVHMDCIHWVNRDSYLPQGSRGLKAVTRALLGYEPHELDPE 453          
BLAST of Ggra6925.t1 vs. uniprot
Match: A0A7S2SRI6 (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SRI6_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.530e-72
Identity = 140/307 (45.60%), Postives = 180/307 (58.63%), Query Frame = 0
Query:   36 ELYLLRKSLMSIIQRNVERNNRNAALNDMVQGGFAAPSDPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVTPGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            +L L+R ++  II +N +R+  + A      G    P D +   +E+REY V    R++ID  INVG WY+VTP   + +SA      +  QD                             I+E+A   V AFDIECTK+PLKFPDAE   QV MIS++ DG+G+L INR  VS D  DFEY P PEY G FEV NE +E++ L+RFF+  +   P ++VTYNGDFFD PFVETRA + GM+M  EIG+R ET   +     G  AVH D FHWV RDSYL  GSRGLKAVT+  LG++P E+  E
Sbjct:    2 DLRLVRSAMQPIIAKNAKRSKADDAYA-FTYGDDECPDDLMTCCLELREYDVQYYTRVSIDLGINVGAWYTVTPRISDGTSASGLGVDIERQD-----------------------------IIEKAEARVLAFDIECTKQPLKFPDAE-FDQVFMISYVFDGQGYLIINREHVSADISDFEYTPKPEYPGPFEVFNEADERATLERFFTHCKELRPNIWVTYNGDFFDWPFVETRAKVYGMNMHTEIGVR-ETSSGVYT---GSCAVHMDCFHWVQRDSYLPAGSRGLKAVTKAKLGYDPVEVDPE 273          
BLAST of Ggra6925.t1 vs. uniprot
Match: A0A2V3IHN6 (DNA polymerase epsilon catalytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHN6_9FLOR)

HSP 1 Score: 252 bits (643), Expect = 3.400e-72
Identity = 120/152 (78.95%), Postives = 134/152 (88.16%), Query Frame = 0
Query:  191 MISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            MISWMVDG GFL INR  VSKD ++FEYRPHPE+ G FE+ NEPNEK++LQRFFSEVRLAAP VFVT+NGD+FD PF+ETRASMLGMDM  EI +RC+TDLRM +QT+GRS +H DVFHWVNRDSYL QGSRGLKAVTRVLLGFEPEEIP E
Sbjct:    1 MISWMVDGNGFLAINREVVSKDIDNFEYRPHPEFHGSFEIYNEPNEKAVLQRFFSEVRLAAPIVFVTFNGDYFDWPFIETRASMLGMDMGKEISMRCQTDLRMTRQTEGRSTIHMDVFHWVNRDSYLPQGSRGLKAVTRVLLGFEPEEIPPE 152          
BLAST of Ggra6925.t1 vs. uniprot
Match: A0A812Q0Y1 (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q0Y1_9DINO)

HSP 1 Score: 249 bits (637), Expect = 3.550e-71
Identity = 148/342 (43.27%), Postives = 195/342 (57.02%), Query Frame = 0
Query:    1 MAELSVVHLEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQRNVERNNRNAALNDMVQGGFAAPSDPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVTPGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            +A +S   +ED+  PNHL+  + R  LKLE R+  EL  +R  L  I+Q N +R   +A          A P +  +A+ ++REY V    R +ID+++ VG WY VT  G                                        L  L ++VE+A P + AFDIECTK PLKFPDA A+ Q+ MIS+M+DG+GFL INR  VS+D  DFEY P P + G F V NE +E++ L+ FFS ++   P+VFVTYNGDFFD PFVETRA+  GMDM +EIG+R         +  GR+AVH D  +WV RDSYL  GS GLKAVT+  LG++P EI  E
Sbjct:  136 IAGVSTAEMEDLDLPNHLSGIK-RTLLKLEFRSVQELMEVRNELQPIVQAN-KRRLADAVAQATAAQDSAPPDNFFEALEDLREYDVPYYVRTSIDREVRVGLWYKVTASGSA-----------------------------------GVGLEALPDMVEKAGPRILAFDIECTKAPLKFPDA-AMDQIYMISYMLDGRGFLIINRAIVSQDVPDFEYTPKPAFTGPFTVWNEADEEACLKAFFSHIQSTKPQVFVTYNGDFFDWPFVETRAAAYGMDMYEEIGVRATRS----GEYRGRAAVHMDCLYWVKRDSYLPSGSHGLKAVTKYKLGYDPVEIDPE 435          
BLAST of Ggra6925.t1 vs. uniprot
Match: M2X793 (DNA polymerase epsilon catalytic subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X793_GALSU)

HSP 1 Score: 249 bits (636), Expect = 9.850e-71
Identity = 150/339 (44.25%), Postives = 195/339 (57.52%), Query Frame = 0
Query:    7 VHLEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQRNVER--NNRNAALNDMVQGGFAAP-SDPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVTPGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            V L D S PNH+A    R  L +E RT +EL      + S + R +E    +RN  L +  +       SD   +++E+ EY ++ ++R  I + I+VG WY+V    D+ S+A     VLH                             LSEIVER  PVV AFDIE TK PLKFPDA+   QVMMISWM+DGKG+L +NR  V+ + +DF Y P  E+ G F V NE +E+SLL RF  E++L  P++FVTYNGD FD PFV  RA    +D+  EIGI C       ++T GR+ +H D  HWVNRDSYL QGSRGLKAVTR LLG++P E+  E
Sbjct:  132 VALHDQSVPNHVASMTKRSLLAIEFRTMSEL----NEVSSFVLRRLEEFSTSRNLLLEETKENEEKLTRSDGFHSILEIFEYDISPISRTMISQNIHVGLWYNVRV--DSKSNA-----VLHP----------------------------LSEIVERPQPVVLAFDIETTKAPLKFPDAKTGDQVMMISWMIDGKGYLGVNREIVAANIDDFTYSPKDEFPGDFTVFNENDERSLLLRFLDEIQLHTPQIFVTYNGDMFDWPFVFERARYYDIDIEKEIGISCNQ-----RETRGRATIHLDCMHWVNRDSYLPQGSRGLKAVTRSLLGYDPLELDPE 426          
BLAST of Ggra6925.t1 vs. uniprot
Match: A0A433QVX5 (DNA polymerase epsilon catalytic subunit n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QVX5_9FUNG)

HSP 1 Score: 237 bits (605), Expect = 4.040e-70
Identity = 146/345 (42.32%), Postives = 191/345 (55.36%), Query Frame = 0
Query:    7 VHLEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQRNVERNNRNAALNDMVQGGF---------AAPSDPLDAVMEMREYHVAAVNRLAIDKKINVGYWYSVTPGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSAHLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKGFLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLAAPRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGRSAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE 342
            V  ED+S  NHL L   R FL+L  R  A+L  +RK L+  ++RN E+ N   A  D+                P D LD V+++RE+ V    R+AID  I VG WY++                 H Q                        LTR  ++V+RA PVV AFDIE TK PLKFPDA A+  +MMIS+M+DG+G+L  NR  VS+D +DFEY P PE++G F + NEP+E SLL+RFF  ++   P V+VTYNGD FD PFVE RA++ G+D+  EIG          ++     A+H D F WV RDSYL QGS+GLKAVT   LG+ P E+  E
Sbjct:  185 VKKEDLSQQNHL-LGCNRIFLQLVFRNVADLLTVRKLLLPTVKRNQEKMNIVDAYADIANTAIDYEQPVTARKNPHDALDNVIDIREFDVPYYLRVAIDNDIRVGLWYTI--------------QATHGQ----------------------ITLTRRHDLVKRAEPVVIAFDIEVTKLPLKFPDA-AIDSIMMISYMIDGQGYLITNREIVSQDIDDFEYTPKPEFEGPFTIFNEPDELSLLRRFFEHIQEVRPTVYVTYNGDSFDWPFVEARANLHGIDIYQEIGFYKNEQ----EEYKSNYAIHMDAFRWVKRDSYLPQGSQGLKAVTTAKLGYNPMELDPE 487          
The following BLAST results are available for this feature:
BLAST of Ggra6925.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPH93.550e-15570.32DNA-directed DNA polymerase n=1 Tax=Gracilariopsis... [more]
R7QE001.800e-12461.11DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
A0A7S2ZS962.080e-8647.04DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A5J4Z2721.130e-7742.98DNA-directed DNA polymerase n=1 Tax=Porphyridium p... [more]
M1VKI47.140e-7544.16DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
A0A7S2SRI61.530e-7245.60DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A2V3IHN63.400e-7278.95DNA polymerase epsilon catalytic subunit n=1 Tax=G... [more]
A0A812Q0Y13.550e-7143.27DNA polymerase epsilon catalytic subunit (Fragment... [more]
M2X7939.850e-7144.25DNA polymerase epsilon catalytic subunit n=1 Tax=G... [more]
A0A433QVX54.040e-7042.32DNA polymerase epsilon catalytic subunit n=1 Tax=J... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 166..342
e-value: 9.0E-31
score: 109.0
IPR006133DNA-directed DNA polymerase, family B, exonuclease domainPFAMPF03104DNA_pol_B_exo1coord: 22..327
e-value: 1.5E-47
score: 162.4
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..340
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:74215..75243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6925.t1Ggra6925.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 74215..75243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6925.t1 ID=Ggra6925.t1|Name=Ggra6925.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=343bp
MAELSVVHLEDISAPNHLALPEGRPFLKLEERTSAELYLLRKSLMSIIQR
NVERNNRNAALNDMVQGGFAAPSDPLDAVMEMREYHVAAVNRLAIDKKIN
VGYWYSVTPGGDNWSSARSQRHVLHDQDAEPDVQLDPDMNEGSANDFFSA
HLTRLSEIVERASPVVFAFDIECTKKPLKFPDAEAVGQVMMISWMVDGKG
FLDINRRAVSKDNEDFEYRPHPEYDGHFEVCNEPNEKSLLQRFFSEVRLA
APRVFVTYNGDFFDLPFVETRASMLGMDMSDEIGIRCETDLRMIKQTDGR
SAVHRDVFHWVNRDSYLLQGSRGLKAVTRVLLGFEPEEIPTE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR006133DNA-dir_DNA_pol_B_exonuc
IPR029703POL2
IPR012337RNaseH-like_sf