Ggra6878.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6878.t1
Unique NameGgra6878.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length222
Homology
BLAST of Ggra6878.t1 vs. uniprot
Match: A0A2V3IGF4 (Hephaestin-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGF4_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 1.560e-45
Identity = 86/134 (64.18%), Postives = 102/134 (76.12%), Query Frame = 0
Query:   35 GGAEVARRLR-PAVVYRWGDLSPCGMPRVLGRELLAVLWVGGENVADEEGDEQEGKFMHSMNGRVSCALPQFDLVEGRRARLYLGTVSNDVDVHTSYMHGQVGITAGGEHVDSIRLLPGSTAALQTLSEGV-VW 166
            G A V R L  PAVVYR   LS  G+PR +  EL AVLWVG ENVADE+GDE+E   MHS+NGRV CALP F++ EGRR R YLG V N+VDVHT+++HG VG+TAGGEHVDSIRLLPGSTA ++ + + V VW
Sbjct:  199 GSAGVYRGLLGPAVVYRRNALSKRGLPRAVPHELFAVLWVGDENVADEQGDERESNLMHSVNGRVFCALPAFEMQEGRRTRFYLGAVGNEVDVHTAHVHGLVGVTAGGEHVDSIRLLPGSTAVVEIVPDNVGVW 332          
BLAST of Ggra6878.t1 vs. uniprot
Match: A0A2V3ILL1 (Hephaestin-like protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILL1_9FLOR)

HSP 1 Score: 100 bits (248), Expect = 1.820e-23
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 0
Query:   91 MHSMNGRVSCALPQFDLVEGRRARLYLGTVSNDVDVHTSYMHGQVGITAGGEHVDSIRLLPGSTAALQTLSEGV-VW 166
            MH +NGR+ CALP F++ EGRR  LY GTV N+VD+HT+++HG VG+TAGGEHVDS  LLPGSTA +  + + + VW
Sbjct:    1 MHYINGRLFCALPAFEMQEGRRTWLYHGTVGNEVDLHTAHVHGLVGVTAGGEHVDSKLLLPGSTAVVDIVPDNIGVW 77          
BLAST of Ggra6878.t1 vs. uniprot
Match: A0A2V3IGE8 (Hephaestin-like protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGE8_9FLOR)

HSP 1 Score: 78.6 bits (192), Expect = 2.730e-15
Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = 0
Query:  102 LPQFDLVEGRRARLYLGTVSNDVDVHTSYMHGQVGITAGGEHVDSIRLLPGSTAALQTLSEGV 164
            +P F++ EGR  RLY GT+ N+VD+HT+++HG VG+TAGGEHV SI LLPG T  ++ + + +
Sbjct:    1 MPAFEMQEGRGTRLYHGTMGNEVDLHTAHVHGLVGVTAGGEHVHSILLLPGPTGVVEIVMDNI 63          
BLAST of Ggra6878.t1 vs. uniprot
Match: A0A2V3IG92 (Hephaestin-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG92_9FLOR)

HSP 1 Score: 69.7 bits (169), Expect = 4.600e-12
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
Query:  115 LYLGTVSNDVDVHTSYMHGQVGITAGGEHVDSIRLLPGSTAALQTLSEGV-VWDYAPPGSNR 175
            +Y GT+ N+VD+HT++MHG VG+TAGGEHVDSI LL GSTA ++ + +   VW +    +NR
Sbjct:    1 MYHGTMDNEVDLHTAHMHGLVGVTAGGEHVDSILLLLGSTAVVEIVPDNTGVWLFQCHVNNR 62          
BLAST of Ggra6878.t1 vs. uniprot
Match: A0A4P9Y6F7 (Cupredoxin (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y6F7_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 3.300e-9
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 0
Query:   45 PAVVYRWGDLSPCGMPRVLGRELLAVLWVGGENVADE--------------EGDE-QEGKFMHSMNGRVSCALPQFDLVEGRRARLYLGTVSNDVDVHTSYMHGQVGITAGGEHVDSIRLLPGST 154
            P ++YR G LS  G  R    EL+A   V  EN +                 G+E +E   MH +NGR+   LP       RR R Y+G++ N+VD+HT++ HG  G++ G   +D + LLPG+T
Sbjct:  139 PMIIYRRGALS--GPLRDYDDELIAFFMVHDENKSHYLKQNLALFAGDITMTGEEPKESNMMHGINGRLFNNLPGLTGKVNRRLRWYIGSLGNEVDLHTAHWHGATGLSYG-RRLDVVGLLPGAT 260          
BLAST of Ggra6878.t1 vs. uniprot
Match: A0A2V3ILK8 (Hephaestin-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILK8_9FLOR)

HSP 1 Score: 59.3 bits (142), Expect = 8.500e-8
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  120 VSNDVDVHTSYMHGQVGITAGGEHVDSIRLLPGSTAALQTLSEGV-VWDYAPPGSNR 175
            + N+VD  T+++HG VG+TAGGEHVDSI LLPGSTA ++ + +   +W +    +NR
Sbjct:    1 MDNEVDFPTAHVHGLVGVTAGGEHVDSILLLPGSTAVVEIVPDNTGLWLFHCHVNNR 57          
The following BLAST results are available for this feature:
BLAST of Ggra6878.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IGF41.560e-4564.18Hephaestin-like protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILL11.820e-2359.74Hephaestin-like protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IGE82.730e-1552.38Hephaestin-like protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IG924.600e-1253.23Hephaestin-like protein n=1 Tax=Gracilariopsis cho... [more]
A0A4P9Y6F73.300e-935.20Cupredoxin (Fragment) n=1 Tax=Piptocephalis cylind... [more]
A0A2V3ILK88.500e-849.12Hephaestin-like protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008972CupredoxinGENE3D2.60.40.420coord: 65..172
e-value: 6.7E-13
score: 50.5
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 79..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:816604..817497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6878.t1Ggra6878.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 816604..817497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6878.t1 ID=Ggra6878.t1|Name=Ggra6878.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=222bp
MAFQLDSVRRLWKTPASTSPKADRAAGVPRHGGRGGAEVARRLRPAVVYR
WGDLSPCGMPRVLGRELLAVLWVGGENVADEEGDEQEGKFMHSMNGRVSC
ALPQFDLVEGRRARLYLGTVSNDVDVHTSYMHGQVGITAGGEHVDSIRLL
PGSTAALQTLSEGVVWDYAPPGSNRSDRTPFGDDELSSWHRVAENTCRIE
ERSGRRAMGVRGVLERWMRET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008972Cupredoxin