Ggra6873.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6873.t1
Unique NameGgra6873.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length415
Homology
BLAST of Ggra6873.t1 vs. uniprot
Match: A0A2V3IRH5 (BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRH5_9FLOR)

HSP 1 Score: 274 bits (700), Expect = 8.050e-85
Identity = 177/429 (41.26%), Postives = 233/429 (54.31%), Query Frame = 0
Query:   25 YCPKGEHFRSHLVNKLLEADS-AHILCDVVLQTSEGHEVPACRALLAARSDFFLSLFFSNFEEAKQKTVKLNVTKQVLRHLLLFAYTGHCEFVKEVLQFCELESIRKSHCGFPHHYRLPALVQLSAAAEYHGFKLLHIWCDSALYSICDNHVRSACLVLRAMSDYCGSHPARHDIIDTVWGNIEVAFNVPKSVSSGQSDNSSNDESFDDDDEC-----------------SSSDSKN------------------TDPKKLGILELSPTALDTVLSGDLEQISCPNRHEYLFQSIFYWVTNGTALKRGY----KVRTKETGVDA--NGGNTDNQIEGNGGGTEPSXXXXXXXXXXXXXXXXXXXXXGVFYVDCERMKWGKLFASRLNLKRMRIRFVHDYVMPTGLTGEIDFVDMLWNHVLSTTSEIREL 411
            Y P  + FRSHL++ LL + + AH +CDVVL TS+ H+VPACRALLA  S++F +LFFS F++++   ++L +   VL H+L FAYTGHC  V+++L     +S   SH  F  H  L  LV+L+AAA+Y+GF LLH WCDSAL+ IC     +AC V++AMSD   SHP+R  ++  +  N + AFNVP+SVS   +  S+   SF                       S    KN                  +DP   GILELSP  LD VLS  L      N HEYL Q IFYWVT G+ L+R       V++  T  +A     NT N+ E      +                        +  VD +R +WGK F SRL+LK MRIRFVHD+V+PTGL   +D +DMLWN+VLSTT  I EL
Sbjct:   20 YNPSDDQFRSHLLSTLLHSPTTAHKICDVVLITSDHHKVPACRALLAVHSEYFRTLFFSEFKQSEPDAIQLTMRSSVLHHVLTFAYTGHCALVRDML-----DSPHFSHF-FRKHDELRLLVELAAAADYYGFVLLHRWCDSALHRICTRFHAAACTVVQAMSDNDASHPSRALLVKLIRSNCKTAFNVPQSVSDDSTFMSNAFMSFGQTPSTPQPVFVPRTDVFGAPLQSRRSEKNVITPFSSMPQTNPVQQVLSDPNTYGILELSPQVLDEVLSDSLAS----NTHEYLVQCIFYWVTRGSILRRKNCKLKPVKSSSTKREAACKSENTVNKKESKHSTCDSQQ---------------------LILVDDDRFEWGKKFVSRLDLKAMRIRFVHDFVIPTGLVENVDLLDMLWNYVLSTTCAIAEL 417          
BLAST of Ggra6873.t1 vs. uniprot
Match: A0A182K3X8 (Uncharacterized protein n=1 Tax=Anopheles christyi TaxID=43041 RepID=A0A182K3X8_9DIPT)

HSP 1 Score: 59.7 bits (143), Expect = 7.340e-6
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 0
Query:   58 EGHEVPACRALLAARSDFFLSLFFSNFEEAKQKTVKLNVTKQVLRHLLLFAYTGHCEFVKEVLQFCELESIRKSHCGFPHHYRLPAL 144
            E   +PA RA+LAARS++F +L +   EE+KQ  + L V     +HLL F YTG  E     L+  EL+++     G  H Y + AL
Sbjct:  743 EKDRIPAHRAILAARSEYFRALLYGGLEESKQNEITLGVPSIAFKHLLRFIYTGSVE-----LKDMELDNLLNL-LGLAHQYGITAL 823          
The following BLAST results are available for this feature:
BLAST of Ggra6873.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRH58.050e-8541.26BTB domain-containing protein n=1 Tax=Gracilariops... [more]
A0A182K3X87.340e-639.08Uncharacterized protein n=1 Tax=Anopheles christyi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 50..171
e-value: 7.3E-9
score: 45.4
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 47..117
e-value: 4.7E-15
score: 55.8
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 50..117
score: 15.948867
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 33..192
e-value: 3.2E-18
score: 68.1
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 28..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..242
NoneNo IPR availableCDDcd18186BTB_POZ_ZBTB_KLHL-likecoord: 49..121
e-value: 2.2601E-11
score: 57.5637

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:732602..733846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6873.t1Ggra6873.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 732602..733846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6873.t1 ID=Ggra6873.t1|Name=Ggra6873.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=415bp
MSAFVNVSANIYTDQDDGAFLVPDYCPKGEHFRSHLVNKLLEADSAHILC
DVVLQTSEGHEVPACRALLAARSDFFLSLFFSNFEEAKQKTVKLNVTKQV
LRHLLLFAYTGHCEFVKEVLQFCELESIRKSHCGFPHHYRLPALVQLSAA
AEYHGFKLLHIWCDSALYSICDNHVRSACLVLRAMSDYCGSHPARHDIID
TVWGNIEVAFNVPKSVSSGQSDNSSNDESFDDDDECSSSDSKNTDPKKLG
ILELSPTALDTVLSGDLEQISCPNRHEYLFQSIFYWVTNGTALKRGYKVR
TKETGVDANGGNTDNQIEGNGGGTEPSVDSKGGDTDDGSQEDGGGAEPGV
FYVDCERMKWGKLFASRLNLKRMRIRFVHDYVMPTGLTGEIDFVDMLWNH
VLSTTSEIRELKVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ_sf