Ggra6866.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6866.t1
Unique NameGgra6866.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length338
Homology
BLAST of Ggra6866.t1 vs. uniprot
Match: A0A2V3IRI1 (Hsp70 nucleotide exchange factor FES1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRI1_9FLOR)

HSP 1 Score: 432 bits (1110), Expect = 4.030e-149
Identity = 224/337 (66.47%), Postives = 275/337 (81.60%), Query Frame = 0
Query:    1 MSEPKSSAAHDAGVASKAMEALQKEKQRKESEKVLSGENISSLNQLLQWSTAHSEDPNTTNTEGRRKAAGKTEEQLENDREWLDKAFPDPFAEVNQLVRMLREGDLEEDKTVQVLEGLQEYFMDLNYAINIEKIGALEPIMQHLIGDSPAVRAAAFWVLGSAMRDLQQVKDLVMEKERYKALAAGLTDANGSVRAKAVMASSALLRHSSEDVQNKFKEAGGMSSLRFLLHDRIPQVRRRARFFLQHARETGNGGFVNDLLDDQPSIAAFTSSVEEIDADDVADVEAAVGAIDVLVETDKMGLLRLAPELPGIIDALYEKCSDADLCELLQGLKTRLD 337
            MS+  S +  DA   S A+EAL K KQ KE+EKVLSGE+I+SLN+LLQWSTAHS++P + N EGR+KA  KT++QL+ DR WLD+AFPDPFAE+N+L+R+LRE    +  TVQ+LEG+QEYFMDLN+AINI+K+GALEP++     +S  VRAAAFWV+GSAMRDLQ+VK+LVME++ +KALA GL D  G+VRAKAVMASSALLRHSS  VQNKFKE GG +SL  LL D   QVRRRARFFLQHARETGN  FV DLLDDQ  +A+ ++S+EE+D DDVADVEAAVGA+ VL+ETDKMGLLRLAPELP +ID+L  KCSD DL +LL+ L +++D
Sbjct:    1 MSQSNSLSTADADATSAALEALNKMKQEKEAEKVLSGEDITSLNKLLQWSTAHSDNPTSLNNEGRQKAVEKTQDQLDKDRAWLDQAFPDPFAEINELIRILREDTPSQRATVQILEGIQEYFMDLNFAINIDKMGALEPVLNLTAAESSEVRAAAFWVIGSAMRDLQEVKELVMERDGHKALAEGLKDETGAVRAKAVMASSALLRHSSPAVQNKFKEVGGTASLLALLSDENSQVRRRARFFLQHARETGNPDFVRDLLDDQSCVASLSASIEELDVDDVADVEAAVGALGVLIETDKMGLLRLAPELPDVIDSLVSKCSDHDLRDLLRELASQMD 337          
BLAST of Ggra6866.t1 vs. uniprot
Match: R7QQP3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQP3_CHOCR)

HSP 1 Score: 244 bits (622), Expect = 7.040e-77
Identity = 127/215 (59.07%), Postives = 160/215 (74.42%), Query Frame = 0
Query:  122 FMDLNYAINIEKIGALEPIMQHLIGDSPAVRAAAFWVLGSAMRDLQQVKDLVMEKERYKALAAGLTDANGSVRAKAVMASSALLRHSSEDVQNKFKEAGGMSSLRFLLHDRIPQVRRRARFFLQHARETGNGGFVNDLLDDQPSIAAFTSSVEEIDADDVADVEAAVGAIDVLVETDKMGLLRLAPELPGIIDALYEKCSDADLCELLQGLKTRL 336
            F DLNYAINI+K+GAL+PI+     D P VRAAA W LGSA++DL++VKD+ M+++ ++ LA  L D N  VRAKAVMASSALLR+SS++++ +F E GG  SLR LL D    VRRRARFF+QHAR TGN  FV DLLDD+ +IAAF+ S+  +D DDVAD+EA +GA+ VLVE DK GLLR+APELPG+ID +  +C D DL E L  L   L
Sbjct:    2 FEDLNYAINIDKLGALQPILNCAAADEPEVRAAAVWALGSALQDLKEVKDVFMQRDGHEVLAKCLLDLNAKVRAKAVMASSALLRNSSKEIRERFAELGGTISLRRLLADDNILVRRRARFFMQHARATGNEEFVRDLLDDRNAIAAFSESIAALDVDDVADMEAGIGALQVLVEIDKQGLLRVAPELPGVIDQVVARCGDPDLAESLTSLADSL 216          
BLAST of Ggra6866.t1 vs. uniprot
Match: A0A7S2ZKX1 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKX1_9RHOD)

HSP 1 Score: 123 bits (309), Expect = 2.490e-29
Identity = 87/253 (34.39%), Postives = 133/253 (52.57%), Query Frame = 0
Query:   40 ISSLNQLLQWSTAHSEDPNTTNTEGRRKAAGKTEEQLENDREWLDKAFPDPFAEVNQLVRMLREGDLEEDKTVQVLEGLQEYFMDLNYAINIEKIGALEPIMQHLIGDSPA-VRAAAFWVLGSAMRDLQQVKDLVMEKERYKALAAGLTDAN-GSVRAKAVMASSALLRHSSEDVQNKFKEAGGMSSLRFLLHDRIPQVRRRARFFLQHARE----------TGNGGFVNDLLD------DQPSIAAFTSSVE 274
            + SLNQ+L+WS   S    T +    RK   K    +E ++  LD+ F D +  +  L ++  +   +     + LE L+EY  DLN+A+N  K+G L   +    G   + +RA A W+LG++M+D+Q VKD ++E      L   L D N G VRAK VMASSALLR+S +  + +F  AGG++++   L D   Q R RA FFL+H+R+          + +     +LLD      D+ + AA   +VE
Sbjct:    7 LKSLNQVLKWSVKES----TKDGAEVRKVDPKV---VEENKHLLDELFKDEYGGIEALRKLAADESADVGDRAEALEALEEYAQDLNFAVNFGKVGVLRTAVDVFRGSEDSRLRANAVWLLGTSMQDVQSVKDELVEMGVIPVLKEALEDENSGKVRAKGVMASSALLRNSPQ-YEERFTAAGGLNAIGMRLLDTEQQPRERAMFFLEHSRKNKCDYFASYVSSDKSLTENLLDRVASDQDEAAAAAIAEAVE 251          
BLAST of Ggra6866.t1 vs. uniprot
Match: R7QQE5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQE5_CHOCR)

HSP 1 Score: 79.7 bits (195), Expect = 6.900e-15
Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   15 ASKAMEALQKEKQRKESEKVLSGENISSLNQLLQWSTAHSEDPNTTNTEGRRKAAGKTEEQLENDREWLDKAFPDPFAEVNQLVRML 101
            A+ A+EALQK +  KE++ V+SG +I+SLN+ LQWSTA++  P   ++    KA  KTEEQL  DREWLD AFPD FA+V ++   L
Sbjct:   13 ATAALEALQKARTEKEAQGVISGNDITSLNKFLQWSTANTTKPEQASSGD--KATEKTEEQLAADREWLDAAFPDMFADVKRVFAKL 97          
BLAST of Ggra6866.t1 vs. uniprot
Match: uncharacterized protein LOC109181872 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00090150C5 (uncharacterized protein LOC109181872 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00090150C5)

HSP 1 Score: 64.7 bits (156), Expect = 5.510e-8
Identity = 57/210 (27.14%), Postives = 102/210 (48.57%), Query Frame = 0
Query:   46 LLQWSTAHSEDPNTTNTEGRRKAAGKTEEQLENDREWLDKAFPDPFAEVNQLVRMLREGDLEEDKTVQVLEG--------------LQEYFMDLNYAINIEKIGALEPIMQHLIGDSPAVRAAAFWVLGSAMRDLQQVKDLVMEKERYKALAAGLT-DANGSVRAKAVMASSALLRHSSEDVQNKFKEAGGMSSLRFLLHDRIPQVRRRA 240
            LL+WS +H++        G   +   +EE    DR+W  +A     A+   +++ ++E  L      QVLE               LQE+   ++ A ++  IG L P++ +L      +RA A  V+ + +++  + + LVME    + L +  T DA+ +VR KA+ A S+L+RH+   +   F+ A G ++LR  L     + +R+A
Sbjct:   11 LLKWSLSHAD--------GTHSSRNLSEE----DRKWFMEAMQ---AQTVDVLKRMKEISLVMQTPEQVLESQGITPQDIEDMLDELQEHVESIDMANDLHSIGGLVPLLGYLRNSHANIRAKAAEVVSTIVQNNPRSQQLVMEANGLEPLLSNFTSDADVTVRTKALSAISSLIRHNKPGIA-AFRLANGYAALRDALGSESARFQRKA 204          
BLAST of Ggra6866.t1 vs. uniprot
Match: A0A7J7GN19 (TOG domain-containing protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GN19_CAMSI)

HSP 1 Score: 63.9 bits (154), Expect = 9.180e-8
Identity = 57/207 (27.54%), Postives = 100/207 (48.31%), Query Frame = 0
Query:   46 LLQWSTAHSEDPNTTNTEGRRKAAGKTEEQLENDREWLDKAFPDPFAEVNQLVRMLREGDLEEDKTVQVLEG-----------LQEYFMDLNYAINIEKIGALEPIMQHLIGDSPAVRAAAFWVLGSAMRDLQQVKDLVMEKERYKALAAGLT-DANGSVRAKAVMASSALLRHSSEDVQNKFKEAGGMSSLRFLLHDRIPQVRRRA 240
            LL+WS +HS+        G R     +EE    DR W  +A     A+   + + +++  L      QVLE            L E+   ++ A ++  IG L P++ +L   +  +RA A  +L + +++  + + LVME    + L +  T D + +VRAKA++A S+L+RH+   +   F  A G + LR  L     +++R+A
Sbjct:   12 LLKWSLSHSD--------GTRPPRNLSEE----DRRWFTEAMQ---AQTVDVTKRMKDITLVMQTPKQVLEAQGVTAVDIEDELHEHVESIDMANDLHSIGGLVPLIGYLKNSNANIRAKAAEILTTIVQNNPKSQQLVMEANGLEPLLSNFTSDPDVTVRAKALLAISSLIRHNKPGIV-AFCLANGYAVLRDALSSESAKIQRKA 202          
BLAST of Ggra6866.t1 vs. uniprot
Match: hsp70-binding protein 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBADB0 (hsp70-binding protein 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBADB0)

HSP 1 Score: 59.7 bits (143), Expect = 2.090e-6
Identity = 51/194 (26.29%), Postives = 94/194 (48.45%), Query Frame = 0
Query:   61 NTEGRRKAAGKTEEQLENDREWLDKAFPDPFA----EVNQLVRMLRE-----GDLEEDKTVQVLEGLQEYFMDLNYAINIEKIGALEPIMQHLIGDSPAVRAAAFWVLGSAMRDLQQVKDLVMEKERYKALAAGL-TDANGSVRAKAVMASSALLRHSSEDVQNKFKEAGGMSSLRFLLHDRIPQVRRRARFFL 244
            NT     AA    +  E  ++WL  A  D +     E+ Q + +++E     GD E ++   +LE +Q+    ++ A + +KIG L  + Q L+     VR  A  ++ +  ++    + +++E E    L   L +DAN +V+ KA+ A S ++R+ S  + + F +  G S L   L   I +++ +A F L
Sbjct:   33 NTPSNTAAASDQRDLSEERQQWLHNALSDMYRDEVKEMQQYLSIMKEKIESDGDEELEQMEIMLENIQDICESMDNARDFDKIGGLPTLKQCLVHSHSGVRWRAAALVATMAQNNPYCQQVLLEGEFLSVLLEMLDSDANDTVKVKAIYAVSCMVRNCSNALDD-FTKKDGFSVLIRALQSGIEKLQIKAAFML 225          
BLAST of Ggra6866.t1 vs. uniprot
Match: A0A7S0BTH8 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BTH8_9RHOD)

HSP 1 Score: 54.3 bits (129), Expect = 8.940e-6
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0
Query:  190 NGSVRAKAVMASSALLRHSSEDVQNKFKEAGGMSSLRFLLHDRIPQVRRRARFFLQHARETGNGGFVNDLLDD 262
            +G VRAK VMASSALLR+S +  + +F   GG++++   L D   Q R RA FFLQH+R      F N + +D
Sbjct:   19 SGKVRAKGVMASSALLRNSPQ-YEEQFIATGGLNAIGMRLLDTEQQPRERAMFFLQHSRRNKCDYFANYVSND 90          
The following BLAST results are available for this feature:
BLAST of Ggra6866.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IRI14.030e-14966.47Hsp70 nucleotide exchange factor FES1 n=1 Tax=Grac... [more]
R7QQP37.040e-7759.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZKX12.490e-2934.39Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
R7QQE56.900e-1551.72Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
uncharacterized protein LOC109181872 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00090150C55.510e-827.14uncharacterized protein LOC109181872 n=2 Tax=Ipomo... [more]
A0A7J7GN199.180e-827.54TOG domain-containing protein n=1 Tax=Camellia sin... [more]
hsp70-binding protein 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBADB02.090e-626.29hsp70-binding protein 1-like n=1 Tax=Saccoglossus ... [more]
A0A7S0BTH88.940e-645.21Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..35
NoneNo IPR availablePANTHERPTHR19316PROTEIN FOLDING REGULATORcoord: 41..299
NoneNo IPR availablePANTHERPTHR19316:SF18HSP70-BINDING PROTEIN 1coord: 41..299
IPR032682Condensin complex subunit 1, C-terminalPFAMPF12717Cnd1coord: 179..257
e-value: 5.8E-6
score: 26.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 89..330
e-value: 5.3E-21
score: 77.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 61..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:714689..715702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6866.t1Ggra6866.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 714689..715702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6866.t1 ID=Ggra6866.t1|Name=Ggra6866.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=338bp
MSEPKSSAAHDAGVASKAMEALQKEKQRKESEKVLSGENISSLNQLLQWS
TAHSEDPNTTNTEGRRKAAGKTEEQLENDREWLDKAFPDPFAEVNQLVRM
LREGDLEEDKTVQVLEGLQEYFMDLNYAINIEKIGALEPIMQHLIGDSPA
VRAAAFWVLGSAMRDLQQVKDLVMEKERYKALAAGLTDANGSVRAKAVMA
SSALLRHSSEDVQNKFKEAGGMSSLRFLLHDRIPQVRRRARFFLQHARET
GNGGFVNDLLDDQPSIAAFTSSVEEIDADDVADVEAAVGAIDVLVETDKM
GLLRLAPELPGIIDALYEKCSDADLCELLQGLKTRLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032682Cnd1_C
IPR011989ARM-like
IPR016024ARM-type_fold