Ggra6853.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6853.t1
Unique NameGgra6853.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length259
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6853.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..235
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 8..58
score: 9.361642

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:673201..673977 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6853.t1Ggra6853.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 673201..673977 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6853.t1 ID=Ggra6853.t1|Name=Ggra6853.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=259bp
MNHSHPNCLACQQPTSPSDTTRLAPCHCFPFHSHCISNHELRTRQASKTA
ALCCPICRTRVTSILQSRPYSPPTSRPPFTHSSIAHSHRTHPAQPPPTSP
YGPSYIPPPPPLADYSLPPPPHPFLYAMQPTAPPPTPPPSKSMFISEPAL
PPRSDKIRVYSDMQLPPNASLWHDRAYATDSDSCRFQFAGSMNISATGVH
SLSVNDRARPDGKQHTPYGQHAHSQHARKKRRRKSRHIEVYWPRSIVVLV
KRIKRMVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING