Ggra6841.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6841.t1
Unique NameGgra6841.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length312
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6841.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..287
IPR012296Nuclease, putative, TT1808GENE3D3.90.1570.10tt1808, chain Acoord: 16..213
e-value: 4.5E-14
score: 54.0
IPR008538Putative restriction endonucleasePFAMPF05685Uma2coord: 24..203
e-value: 1.2E-9
score: 37.9
IPR008538Putative restriction endonucleaseCDDcd06260DUF820coord: 137..215
e-value: 3.65193E-7
score: 47.0389
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 20..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:649313..650248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6841.t1Ggra6841.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 649313..650248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6841.t1 ID=Ggra6841.t1|Name=Ggra6841.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=312bp
MRGSSFAAWDEPVGPLHNTSCTYQEYLLHTFDEEYHYDLVEGTLVSNHLS
TYISHRGCLNRIVRKVIQNRENSLHSQKPFTNSRIEIPAPTEGKRTIRRA
DLVIWKKEDDTKTANADESNRLKVEVFVLIPLALEKPQLVLEVTDYSSTR
EADLITKVHEYERRGIATYVIIDQATSDPSVIVHRLCEITEDSGRKQYQK
HVYRGSERVFCPFIGDMTAEEMLTPILGSAEPCESKQPVQRERVQELVLK
EREIALLKKERVRLRQELERLMLTEENYSTDSHSEEDDDPVAEKDDSTEN
NAPVLLDLRLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012296Nuclease_put_TT1808
IPR008538Uma2
IPR011335Restrct_endonuc-II-like