Ggra6814.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6814.t1
Unique NameGgra6814.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length209
Homology
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BLAST of Ggra6814.t1 vs. uniprot
Match: A0A2V3IDS2 (PRA1 family protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDS2_9FLOR)

HSP 1 Score: 306 bits (785), Expect = 7.920e-104
Identity = 160/208 (76.92%), Postives = 184/208 (88.46%), Query Frame = 0 
Query:    1 MPASAPSPPLSTQPNGPSAPAAKLLGTISSLVSLSQLSSALTTSVPALAPHTENAKTHASALWTSAKPWTEFFNGKKFVPPSSPAELQERLVDNLTYFSSNYLLCFLVLSTASVLIHPLSFLCIVLIMGLYVFMFLQNPESVALGPLRLTANSKKIAFAAISFLLLYLTNAMGIIGSWALFGIILSLIHAACRVSAKEPDFESPVTSV 208
            MPASAP P +  QP+  SAPA  LL  I+S+ SLS +SSAL+TSVPALAPHTE AK H SALW+SAKPWTEFFN KKF PPSSP ELQERL+DNLTYFSSNYLLCFL+LST S+LIHPLSFLCIV+++ LYVFMFLQNP+++ +GP+RLTAN+K+IAF  I+F+LLYLTNA+GIIGSWALFG+ILSLIHAACRVSAKEPDFESPV SV
Sbjct:    1 MPASAPPPSVPAQPSA-SAPAVNLLRAITSVASLSHVSSALSTSVPALAPHTEKAKVHVSALWSSAKPWTEFFNSKKFTPPSSPTELQERLMDNLTYFSSNYLLCFLILSTLSILIHPLSFLCIVVLVALYVFMFLQNPDTLKVGPVRLTANTKRIAFVGIAFILLYLTNAIGIIGSWALFGVILSLIHAACRVSAKEPDFESPVNSV 207
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BLAST of Ggra6814.t1 vs. uniprot
Match: COPII vesicles protein Yip3 n=1 Tax=Talaromyces proteolyticus TaxID=1131652 RepID=UPI001E8DC9BB (COPII vesicles protein Yip3 n=1 Tax=Talaromyces proteolyticus TaxID=1131652 RepID=UPI001E8DC9BB)

HSP 1 Score: 55.1 bits (131), Expect = 5.180e-6
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 0 
Query:   57 THASALWTSAKPWTEFFNGKKFVPPSSPAELQERLVDNLTYFSSNYLLCFLVLSTASVLIHP-LSFLCIVLIMGLY 131
            T  S+ + S KP +EFF+ K+   P+   E+Q R+  NL+YFSSNY L F++LS  S+L +P L F+ I++ +GLY
Sbjct:   25 TSMSSRFASLKPISEFFDLKRLSKPADFGEVQSRVNYNLSYFSSNYALVFVMLSIYSLLTNPVLLFVIILVTVGLY 100
The following BLAST results are available for this feature:
BLAST of Ggra6814.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IDS27.920e-10476.92PRA1 family protein n=1 Tax=Gracilariopsis chorda ... [more]
COPII vesicles protein Yip3 n=1 Tax=Talaromyces proteolyticus TaxID=1131652 RepID=UPI001E8DC9BB5.180e-644.74COPII vesicles protein Yip3 n=1 Tax=Talaromyces pr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 64..197
e-value: 1.9E-28
score: 98.9
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 41..196
NoneNo IPR availablePANTHERPTHR19317:SF0PRENYLATED RAB ACCEPTOR PROTEIN 1coord: 41..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..188
NoneNo IPR availableTMHMMTMhelixcoord: 156..178
NoneNo IPR availableTMHMMTMhelixcoord: 114..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:600359..600985 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6814.t1Ggra6814.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 600359..600985 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6814.t1 ID=Ggra6814.t1|Name=Ggra6814.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=209bp
MPASAPSPPLSTQPNGPSAPAAKLLGTISSLVSLSQLSSALTTSVPALAP
HTENAKTHASALWTSAKPWTEFFNGKKFVPPSSPAELQERLVDNLTYFSS
NYLLCFLVLSTASVLIHPLSFLCIVLIMGLYVFMFLQNPESVALGPLRLT
ANSKKIAFAAISFLLLYLTNAMGIIGSWALFGIILSLIHAACRVSAKEPD
FESPVTSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1