Ggra6785.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6785.t1
Unique NameGgra6785.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length3552
Homology
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BLAST of Ggra6785.t1 vs. uniprot
Match: A0A2V3IS68 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS68_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 3.680e-31
Identity = 65/109 (59.63%), Postives = 89/109 (81.65%), Query Frame = 0 
Query: 2655 ISVRNVIEVKSNFIGIFWENSSLLSSNHARIVLAINHNSQEGLSLFGPTSVVIVPGTWMIHPRKDFIMAINEAKNVKEYKHFSEKTKERISRPDAS--RPGSSAAGDST 2761
            +S+RNVIE+K+NF+G+ W+++ LLSS+HA IVLAINH+S++GL LFGPT VVI PGTWM+ PRKDFI  I+E + VKE+++ SEKTK+ ++RP +   + GSS A DST
Sbjct:    1 MSIRNVIEIKTNFVGVLWDDAYLLSSHHACIVLAINHHSRDGLFLFGPTLVVITPGTWMVCPRKDFIATISEKETVKEFRNLSEKTKKMLARPKSVSLKEGSSGA-DST 108
The following BLAST results are available for this feature:
BLAST of Ggra6785.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IS683.680e-3159.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3243..3263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2403..2428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2049..2068
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2738..2768
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2754..2768
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2022..2068
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..3551
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..55
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:502760..513415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6785.t1Ggra6785.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 502760..513415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6785.t1 ID=Ggra6785.t1|Name=Ggra6785.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=3552bp
MDAAQASMSAQEASLFPFVLFVLAFVAWIVAVVIVLPRLLGRAVSFFVNR
ALGDDLRIVIYAIYIYPLAGRAVAHSVQYTVPNGTIAVEQLVLQIRWWHK
SPVVDFNQLLNVDQPAALDRVAHAQQELQKENTAFFLKRPLYRLRRWWRR
IAAVTDVNDAVEPSALISIHFIGLRTRMVNYQSNYNVLKRVTELARNASR
RASFVNNGVRSRELRSPAFESAGPAISSPSMAYDKSPSSSRSSFSSVQSV
DEKPFIEHLLELTSFRITHGAFYFCDMGESPLVRLSVKSAKLRYMYGAPG
CPVDKCRKRIRMRMSGLKLSVADKASVKNAIHGTLENNSASDSALEDTNY
ADESNTNRMIRRVLSRGYRGISEHISEALEENESRRNSPARRHQRPGLKV
HLMHPRTWTLRRKLHRTRSLPCADVLNAETAIIDYVFDEPGVEHVSRSDM
SSRKRSARAAENFDFRDDSNTNPPPVCRVSIVLKGTSFSYDVQAITDIGR
VLERLQPPFFDLLPVAKRLFSREGKRGATGIQITIDASPVSADDPSSSDP
HSQEALLSIPFAAQESTWKALHLLNIRDWNSSARRDKNLVKERKEGFPVQ
SKLLVKASKVSLRTEIPYEFGAPQKTVVTLRDIDALAEGVVNMPIGGAKL
VTFTRIVQTPQVWNDEHQVSYDIVTSRTEFSLFPDTLRVINDISNTIREH
SKKPESVRYFVPYRERMNIRAEDGYCISVTCSHDNAWRDIHNGIADHYGL
LKLHGTNAELDIKQVAASSYVNDSSELHWSLSLPNLSGKLSLDLLETLTS
VQKSEAKPNVADGGNTGVSYFNKSRTPSLAQRMLLQLETLVAHHSSISPE
KISEETREVVERTFLTVGERCELSGKLVSNAGILFLEGPKHAFLDSVNRS
EIRCSASSVVVDLNPHHTTSFFNVTRNYACGGNHTISSKEKSRIEERRKP
VSIRIIEAGRYPNTAECLTMGLGSGLVMSSGGTHSAADDVFEMNLDIDSL
LVRIHELPHPLSPFSSTHEHVCSVTSSNFGGSLRSNRLGSEMVFYPKRRK
RQVSIFGGYLPSSAMSMNGGSEFSNDEHSLPITVFKGFRLLKRSAASPFW
GSYNSELILDVDEVKGCIMDYSLKCMSSFISNAVPHPLYEDQTAIASMLA
VDTIQFRLSCSDVFVLSPGSCTAAQRGGQRNRTISNRTEKGSSEHFSQKF
IPKFLQAITHISLNRGLRYVISSLATENLASRSRFLISELTVEIMIPWDE
KLPPWVDEATMRAQVSHASPLGTEPSSSLFKGMGVLRKVGECRRAKLDIQ
MEFRPSIWSSRIKFLQEGHVTALFDKFGRRIPRWTTSNRFLTSKGSHELD
ANIPANQEWWDFISDGKEALIFKTQKKDSEGDIMRVEKISVLFPTPIVLR
ISPSCVEVLNDMVTRMHEGLSRYKRSSEHVRDSQSFSYDTGGLLALWTSY
ESNRQSVIPRHAWLHAFRTNSFRALEAAELSVHVLSPIVMEPSDADRFSN
MRTSGTPLILHLPLGLHCLQSTLMDTHEGNQSDYISSSGTASQPLCSFFL
MKTTSHASIPSIVLQCHRGGQDPVEIGVINEILFILRDRVTVNDGRVKDI
SVSRRRQKSQTLVGKVESFHLGSGESSLSAYTGFGKVASVFLLLLRTLAL
NYSSLKQLEAEVLEALSNRYLSTPFPSLCRKHPADVYHLFVDESHFTVGK
ENQLFIGIRNQQSGNESPKGFVTGSSQDKDTEHVKSVDLALRNVSVKISG
QEMLHINVFLCKTGSSSKPDDQISQSRQEMVIKAAFGIVTVFMTDNIAAN
SLRMVSEVASFVGRVTRFFPMLRIDTEQTEDLDVFISSSSGTEKDDQLYS
GNGYPIVKSNLSGGQSPGLENDTFRWSPGSYRRLVHIRPSRRFQGTLSST
RSLTQAEHQSNAVTAFRSSVFRSPATPASVVAQGIHNVPSSMIQSPTSRS
GYNANTIGKNDNSLVKGVTRMMRSQDKEAAVVVATEESNMYQVVAVTTSR
DTGPPRKRAKRMIPRNLVPPAFERPNKTVEELPRGKYSSPVPDQRALRSS
TYPDRKGREQAKLKKNGRRAQPIRSIDEGHVKRVSLISKPKPLIFPANFP
NITMFLSFKKVEMQYMRGRSASSKDDGTKKQAKDAGVIFLVNQPRLTLMS
SVNGMSSIVLTASSSDLRSSNDPNCTMAGAISRFGMTISIAQDLFPRNPP
KLILSAHISEFVATLKARDLQSVLKFREEFKEDLKGVLTAFVSTKDSISE
MARATRLTSSSMGRRALFSTVAIDMLFEDSRVILKGFHPQDTSMSVTYLL
DGLFFSAVASEADSAALTLGLRLYGHGLRLAAPAWGSAEVLRFPSLDARG
VQWVESIGVPTILKVTAEPLTNSTSVQGLRHILFTASGLMAFQNIPTNHG
ESRLHNSARLSDSDPDLPYQDDPDPVPGTPLTRSFAAWERTKGVRMELSI
RPMSLSLVSGPVVALFHLQAVTGTFEWNKLVEKGVQLQTAINIPRISLSF
IRMPSTDFSVQEIKPEDDRTSLSVALERSRVDVLKSQEDLQHTFIFRVDV
HAVSGKLHPFRLLRDAAAWADEQEFVSDLQAMNYNSLSSNRQRLSKPASV
SKQTEHRVILVGFNVQRFKLSVPLLSSEEYSSSRLAFSATNLHLFARQRF
ENSGISVRNVIEVKSNFIGIFWENSSLLSSNHARIVLAINHNSQEGLSLF
GPTSVVIVPGTWMIHPRKDFIMAINEAKNVKEYKHFSEKTKERISRPDAS
RPGSSAAGDSTSNPTEKQDRLLVESLRLKITRTSGFIEGLGDAEEGRYPR
PQASVGADLVSKLSIPAFSIAIARDVNHDFDLIDVDFSGREGEFPRRCLQ
RVSNLFTELFGAVAGEQELQHDHLYFQGTQSQVPGRKVSREVSLLVRFGE
SLYRAQEEASMSFESKFGFFAGKHSAILLSVATTPVFGEEETHTTVYTGI
SPDLKLEITPLLEGAKPQSLRLSTARMLHGTSPCFAPHSLFHISRVTALM
EAKTVLLAERRHRLRPPAIPVTGVEDTSYSVVPVFENSERNALVVLGRAK
HKSNARTREGVPQSNAIQPRSVKSDHDISDKMASVELSTGPETRIDPDIR
LQLKFDSTPNAKVSQMNVFVNRLLFGTNRSRASNGLPAPSVGSYVILHQG
MVRARWDFLSCNLSLRENMMYTVRSIETSPHHNWTCIGNIMNHLKFDVLR
YDTHTLRLNVDALASSCFALPYAVIFESTDIRTEVSHTLLQAIARLLGLI
KKLKNEVKLLSERDLAKGSKQARRTERGVRDNLVATLGDREESLSEAKDD
GQTEVSANLSSEAFANVLRVSSETLLLPSGTRVSMKGRNLVLVLRGYQFD
ERRHNATVTLSGYDLRHRYWVVTENSLNPLKEKNLEFNFDIMKLSYKDEE
RQILSDLCKVPDPALVLRIRDDPQSLAVDLQGHLDIKLGSGFYNWRHFRD
LALLTLYGIDVAPNSEESTRRSEGSSPARDNDLWNGRIPQLTVNLNPRID
VIGDFTSDVLYRMENRLGNGEDIPGYMYHHMVLPLEALTKLLCDPLVRQR
L*
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