Ggra6769.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6769.t1
Unique NameGgra6769.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length239
Homology
[Close]
BLAST of Ggra6769.t1 vs. uniprot
Match: A0A2V3IYF8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYF8_9FLOR)

HSP 1 Score: 235 bits (599), Expect = 1.110e-74
Identity = 115/218 (52.75%), Postives = 151/218 (69.27%), Query Frame = 0 
Query:    1 MMTARRYTQDLLLELYTELTTLIPCFTDTETFERAITAPWFQDDVKNISNRFYHLARIVYGKHARGRDFSPIPKHISSFMPANVAGLYRFENDVDIHRIVKYGDWFLQYLKDGESANRLLKRLLPEAEEEDRYYALNYSKCPRDELQRHMKAYETRTHKRSLAFWARDFEVSMRKARVSISKIKNALEDWLSDERLGKATVISDGVETSVVYPSRKRK 218
            M TA+++   LLLEL T LT L+PCF D+E F RA+ APWF+ DV+    RF  L R+VYGK  R  + +      SS +P  + GL + E D D+HRIV+YG WF QYL+D   A R+LKR LP A+  DRYYALNY+  PRDEL++H   +E RT  RS+ FW RD EVSM++++V+++K+KNA  DW  DE+ GKATV+SDGVE+ VV+  RKRK
Sbjct:    1 MTTAKKFVNSLLLELCTILTALLPCFADSEDFNRALNAPWFEQDVQKAIERFQQLERVVYGK--RRNNAATQTNSPSSVLPGRLKGLLQLEGDTDLHRIVRYGQWFQQYLRDARLAKRVLKRELPNADATDRYYALNYATTPRDELEKHSVQFEERTGTRSMLFWVRDLEVSMKRSKVAVTKVKNAASDWFWDEKAGKATVVSDGVESRVVFTPRKRK 216
The following BLAST results are available for this feature:
BLAST of Ggra6769.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYF81.110e-7452.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:463326..464042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6769.t1Ggra6769.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 463326..464042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6769.t1 ID=Ggra6769.t1|Name=Ggra6769.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=239bp
MMTARRYTQDLLLELYTELTTLIPCFTDTETFERAITAPWFQDDVKNISN
RFYHLARIVYGKHARGRDFSPIPKHISSFMPANVAGLYRFENDVDIHRIV
KYGDWFLQYLKDGESANRLLKRLLPEAEEEDRYYALNYSKCPRDELQRHM
KAYETRTHKRSLAFWARDFEVSMRKARVSISKIKNALEDWLSDERLGKAT
VISDGVETSVVYPSRKRKNENIPIAPMKAYPRKLRRYE*
back to top