Ggra6769.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6769.t1
Unique NameGgra6769.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length239
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:463326..464042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6769Ggra6769Gracilaria gracilis GNS1m malegenetig00000056_pilon 463326..464042 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6769.t1.stop1Ggra6769.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000056_pilon 463326..463328 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6769.t1.CDS1Ggra6769.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000056_pilon 463326..464042 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6769.t1.exon1Ggra6769.t1.exon1Gracilaria gracilis GNS1m maleexontig00000056_pilon 463326..464042 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6769.t1.start1Ggra6769.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000056_pilon 464040..464042 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6769.t1Ggra6769.t1Gracilaria gracilis GNS1m malepolypeptidetig00000056_pilon 463326..464042 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6769.t1 ID=Ggra6769.t1|Name=Ggra6769.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=239bp
MMTARRYTQDLLLELYTELTTLIPCFTDTETFERAITAPWFQDDVKNISN
RFYHLARIVYGKHARGRDFSPIPKHISSFMPANVAGLYRFENDVDIHRIV
KYGDWFLQYLKDGESANRLLKRLLPEAEEEDRYYALNYSKCPRDELQRHM
KAYETRTHKRSLAFWARDFEVSMRKARVSISKIKNALEDWLSDERLGKAT
VISDGVETSVVYPSRKRKNENIPIAPMKAYPRKLRRYE*
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spliced messenger RNA

>Ggra6769.t1 ID=Ggra6769.t1|Name=Ggra6769.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=717bp|location=Sequence derived from alignment at tig00000056_pilon:463326..464042- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATGACAGCCCGAAGGTACACCCAAGATCTCCTTCTTGAGCTCTATAC
AGAATTGACGACGTTAATTCCGTGTTTCACCGACACGGAAACGTTTGAGA
GAGCAATCACAGCACCTTGGTTTCAAGATGATGTGAAGAACATCAGCAAC
CGTTTCTATCATTTGGCGCGCATTGTGTACGGAAAGCACGCAAGAGGGCG
AGATTTCTCACCCATCCCGAAGCACATATCGTCTTTCATGCCAGCCAACG
TGGCAGGACTTTATCGTTTCGAGAATGATGTCGACATTCATCGCATCGTT
AAGTACGGCGATTGGTTCCTGCAGTACTTGAAAGATGGGGAGTCGGCGAA
CCGACTTCTGAAGCGACTTCTACCGGAAGCTGAAGAGGAGGATCGCTATT
ACGCACTCAACTATAGTAAGTGTCCGCGAGACGAGCTTCAAAGGCATATG
AAGGCGTACGAAACTCGTACACATAAGCGTTCGCTCGCATTTTGGGCGCG
AGATTTTGAAGTATCCATGAGGAAAGCCAGAGTATCAATCTCAAAGATTA
AGAACGCTTTAGAGGACTGGCTTTCCGATGAACGGCTTGGCAAGGCCACG
GTAATCAGCGACGGTGTCGAAACCAGCGTTGTATACCCGTCTAGGAAGAG
GAAGAACGAGAACATTCCCATCGCTCCCATGAAAGCGTACCCACGCAAGC
TTCGCCGCTACGAATGA
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protein sequence of Ggra6769.t1

>Ggra6769.t1 ID=Ggra6769.t1|Name=Ggra6769.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=239bp
MMTARRYTQDLLLELYTELTTLIPCFTDTETFERAITAPWFQDDVKNISN
RFYHLARIVYGKHARGRDFSPIPKHISSFMPANVAGLYRFENDVDIHRIV
KYGDWFLQYLKDGESANRLLKRLLPEAEEEDRYYALNYSKCPRDELQRHM
KAYETRTHKRSLAFWARDFEVSMRKARVSISKIKNALEDWLSDERLGKAT
VISDGVETSVVYPSRKRKNENIPIAPMKAYPRKLRRYE*
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mRNA from alignment at tig00000056_pilon:463326..464042-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6769.t1 ID=Ggra6769.t1|Name=Ggra6769.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=717bp|location=Sequence derived from alignment at tig00000056_pilon:463326..464042- (Gracilaria gracilis GNS1m male)
ATGATGACAGCCCGAAGGTACACCCAAGATCTCCTTCTTGAGCTCTATAC
AGAATTGACGACGTTAATTCCGTGTTTCACCGACACGGAAACGTTTGAGA
GAGCAATCACAGCACCTTGGTTTCAAGATGATGTGAAGAACATCAGCAAC
CGTTTCTATCATTTGGCGCGCATTGTGTACGGAAAGCACGCAAGAGGGCG
AGATTTCTCACCCATCCCGAAGCACATATCGTCTTTCATGCCAGCCAACG
TGGCAGGACTTTATCGTTTCGAGAATGATGTCGACATTCATCGCATCGTT
AAGTACGGCGATTGGTTCCTGCAGTACTTGAAAGATGGGGAGTCGGCGAA
CCGACTTCTGAAGCGACTTCTACCGGAAGCTGAAGAGGAGGATCGCTATT
ACGCACTCAACTATAGTAAGTGTCCGCGAGACGAGCTTCAAAGGCATATG
AAGGCGTACGAAACTCGTACACATAAGCGTTCGCTCGCATTTTGGGCGCG
AGATTTTGAAGTATCCATGAGGAAAGCCAGAGTATCAATCTCAAAGATTA
AGAACGCTTTAGAGGACTGGCTTTCCGATGAACGGCTTGGCAAGGCCACG
GTAATCAGCGACGGTGTCGAAACCAGCGTTGTATACCCGTCTAGGAAGAG
GAAGAACGAGAACATTCCCATCGCTCCCATGAAAGCGTACCCACGCAAGC
TTCGCCGCTACGAATGA
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Coding sequence (CDS) from alignment at tig00000056_pilon:463326..464042-

>Ggra6769.t1 ID=Ggra6769.t1|Name=Ggra6769.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=717bp|location=Sequence derived from alignment at tig00000056_pilon:463326..464042- (Gracilaria gracilis GNS1m male)
ATGATGACAGCCCGAAGGTACACCCAAGATCTCCTTCTTGAGCTCTATAC
AGAATTGACGACGTTAATTCCGTGTTTCACCGACACGGAAACGTTTGAGA
GAGCAATCACAGCACCTTGGTTTCAAGATGATGTGAAGAACATCAGCAAC
CGTTTCTATCATTTGGCGCGCATTGTGTACGGAAAGCACGCAAGAGGGCG
AGATTTCTCACCCATCCCGAAGCACATATCGTCTTTCATGCCAGCCAACG
TGGCAGGACTTTATCGTTTCGAGAATGATGTCGACATTCATCGCATCGTT
AAGTACGGCGATTGGTTCCTGCAGTACTTGAAAGATGGGGAGTCGGCGAA
CCGACTTCTGAAGCGACTTCTACCGGAAGCTGAAGAGGAGGATCGCTATT
ACGCACTCAACTATAGTAAGTGTCCGCGAGACGAGCTTCAAAGGCATATG
AAGGCGTACGAAACTCGTACACATAAGCGTTCGCTCGCATTTTGGGCGCG
AGATTTTGAAGTATCCATGAGGAAAGCCAGAGTATCAATCTCAAAGATTA
AGAACGCTTTAGAGGACTGGCTTTCCGATGAACGGCTTGGCAAGGCCACG
GTAATCAGCGACGGTGTCGAAACCAGCGTTGTATACCCGTCTAGGAAGAG
GAAGAACGAGAACATTCCCATCGCTCCCATGAAAGCGTACCCACGCAAGC
TTCGCCGCTACGAATGA
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