Ggra6758.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6758.t1
Unique NameGgra6758.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length320
Homology
BLAST of Ggra6758.t1 vs. uniprot
Match: A0A2V3IX44 (THO complex subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX44_9FLOR)

HSP 1 Score: 606 bits (1563), Expect = 9.940e-219
Identity = 283/319 (88.71%), Postives = 306/319 (95.92%), Query Frame = 0
Query:    1 MSVFHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRDRYVTEQPATYVWGFPRAK 319
            MSVFHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDAS VLVYDTQSL MSTRPER+FLHECHGHTKNIEA+VPSQTSPDMFVTGGVDCLINVYDTRTGSRAIH++ TDSKCLFADWAPDGNTVAIGLSSNT+YFVDCL+WTVRKKMPF GEVNQFRWTPDGRRI+FTRGDGSVDA++WPSL+HIIT+QGHVDTCMG+ACDPKGR+V++ASLDTCVS+WDSMSLSN+FTIDRWEK VQL+DYSYEGQYLA+TGDLE+IDITD+S G+LVHSISTVAVLNGFAWHPSRLLLAYAPMK G   RY  EQPATYVWGF R+K
Sbjct:    1 MSVFHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASTVLVYDTQSLEMSTRPERHFLHECHGHTKNIEAMVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHSLSTDSKCLFADWAPDGNTVAIGLSSNTIYFVDCLTWTVRKKMPFDGEVNQFRWTPDGRRILFTRGDGSVDAFAWPSLEHIITVQGHVDTCMGIACDPKGRYVSVASLDTCVSVWDSMSLSNIFTIDRWEKPVQLLDYSYEGQYLALTGDLERIDITDSSNGSLVHSISTVAVLNGFAWHPSRLLLAYAPMKFG---RYGGEQPATYVWGFSRSK 316          
BLAST of Ggra6758.t1 vs. uniprot
Match: R7QBY0 (THO complex subunit 3-like n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBY0_CHOCR)

HSP 1 Score: 374 bits (959), Expect = 8.570e-127
Identity = 170/320 (53.12%), Postives = 229/320 (71.56%), Query Frame = 0
Query:    1 MSVFHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRDRY--VTEQPATYVWGFPRA 318
            M  F  LE+K   GHR  V+AV WNLDG+RL AAGD + +L++D + +  + RPER  LHEC GH+KNIE ++ S TSP M+ T G+D L+N++D R  +R   ++ TDSKCLF +WAPDGN++AIG  +N +Y VDCLS  + KK PF  + NQFRW+ DG+R+  TRGDGSVD   WPS+  + +++GH   C+G+ACDPK RF+A+ S+DTCVSIWD++S++N+FTIDRWE  VQ  +YS++GQYLA+ G+ + IDIT+++TG L +SI T A +N  AWHPS+ LLAYAP+      RY     QPA  VWG  RA
Sbjct:    1 MHPFVSLETKHFLGHRKVVSAVTWNLDGTRLAAAGDNTGLLIWDAEHIEANARPERRVLHECRGHSKNIEVVLSSPTSPYMYATAGLDNLVNIFDIRADTRPSASITTDSKCLFGEWAPDGNSIAIGTDTNNLYVVDCLSMKISKKFPFEKDFNQFRWSVDGKRMYLTRGDGSVDVDEWPSMKPLTSMRGHARACVGIACDPKSRFIAVTSMDTCVSIWDALSVTNIFTIDRWEVPVQQAEYSHDGQYLALLGECQHIDITESTTGGLRYSIPTGAKVNDMAWHPSQNLLAYAPLP----PRYPPADYQPAVCVWGLARA 316          
BLAST of Ggra6758.t1 vs. uniprot
Match: A0A0M0J863 (Tho complex subunit 3-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J863_9EUKA)

HSP 1 Score: 164 bits (414), Expect = 1.400e-44
Identity = 93/320 (29.06%), Postives = 156/320 (48.75%), Query Frame = 0
Query:    7 LESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPD--GRRIMFTRGDGSVDAYSWPSL------DHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRDRYVTEQPATYVWGFPRA 318
            L +K    H+  V +VAW+  G +L +     +V V+       +T  E        GH  +++ +     +P++  T   D  + ++DTRT ++ +H + T  + +   W+PDG  VA+G   + +  ++       K + F  EVN+  W P   G+    T G GSV+ + +  +        + ++Q H   C  +   PKG ++A+   D  V+IWD   L  + T  R+E  V+ + +S + ++LA   +   +DI D STG  VH +S  A +N  AWHPSRLLLAYA      +DR   +  +  ++GFP A
Sbjct:   15 LGTKEYVAHKRKVHSVAWSCGGQKLASGSVDQSVRVWSLHETGSATHTELT------GHQDSVDQLRWDPLNPEVLGTASGDRTVRIWDTRT-NKQVHAIETRGENINIRWSPDGQHVAVGDKDDNIAIIEMRKCKALKNIKFQSEVNEMAWEPTSGGKFFFLTTGSGSVEIFRYADMLAQEQAQPVHSLQAHTANCYCIDFSPKGEYLAVGGADAMVTIWDVHELVCLRTCTRFEWPVRTLSFSCDSRFLASGSEDLYVDIADVSTGEQVHKLSCSAAMNSVAWHPSRLLLAYAADD---KDRVGRDDGSLRIFGFPSA 324          
BLAST of Ggra6758.t1 vs. uniprot
Match: A0A1J3J0C9 (THO complex subunit 3 (Fragment) n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A1J3J0C9_NOCCA)

HSP 1 Score: 159 bits (403), Expect = 7.340e-43
Identity = 90/312 (28.85%), Postives = 150/312 (48.08%), Query Frame = 0
Query:    4 FHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRDRYVTEQPATYVWGF 315
            F  L S+   GH+  V +VAWN +G++L +        +++ +    S   +     E  GHT +++ +       D   T   D  + ++DTR+G +         + +   + PDG  VA+G   + +  +D   +    K  F  EVN+  W   G +   T G G+V+  S+PSL  + T+  H   C  +A DPKGR+ A+ S D+ VS+WD   +  + T  + E  V+ + +++ G+Y+A   +   IDI +  TG  VH I   A +N   W+P   LLAYA    G   +Y T++    ++GF
Sbjct:   28 FKSLYSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKVKDL----ELKGHTDSVDQLCWDPKHSDQVATASGDKSVRLWDTRSG-KCTQQAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKTLHKRKFSYEVNEIAWNMSGDQFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLESPVRTISFNHSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYA----GDDKKYHTDEGVFRIFGF 330          
BLAST of Ggra6758.t1 vs. uniprot
Match: THO complex subunit 3-like n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CEC557 (THO complex subunit 3-like n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CEC557)

HSP 1 Score: 158 bits (399), Expect = 2.290e-42
Identity = 88/281 (31.32%), Postives = 143/281 (50.89%), Query Frame = 0
Query:   15 HRSSVTAVAWNLDGSRLLAAGDASAVLVY--DTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYA 293
            H + V +V W+ +G RL +      V+VY  D   LA  T           GHT +++ +      PD+  T   D  + ++D R G R    V T  + +   W+PDG T+A+G   + V F+D  +  ++ +  F  EVN+  W  +      T G GSV   S+P+L+ +  ++GH  TC+ +  DP G++ A+ S D+ VS+W++  LS    I+R E  V+ + +S++G+ +A   +   IDI  A+TG  V  +   A     AW+P + LLAYA
Sbjct:   30 HSAKVHSVGWSCEGRRLASGSFDKTVVVYTLDRDRLAKDTT--------LRGHTASVDQLCWHAHHPDLLSTASGDKSVRIWDARAG-RCSAVVNTKGENINITWSPDGKTIAVGNKDDLVTFIDARTNKIKVEKQFNFEVNEIAWNKNNNLFFLTSGTGSVHVLSYPNLESMEVLRGHPATCICIEFDPTGKYFAVGSADSLVSVWNANELSCQHVIERLEWPVRTISFSHDGKLIASGSEDLFIDIAYATTGEKVTKVPVDASTFTVAWNPKKYLLAYA 301          
BLAST of Ggra6758.t1 vs. uniprot
Match: A0A7C9CMZ5 (ANAPC4_WD40 domain-containing protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A7C9CMZ5_OPUST)

HSP 1 Score: 157 bits (396), Expect = 5.750e-42
Identity = 87/315 (27.62%), Postives = 151/315 (47.94%), Query Frame = 0
Query:    4 FHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRDRYVTEQPATYVWGFPRA 318
            F +L S+   GH+  V +VAWN  G++L +        ++       S   +     E  GHT +++ +       D+  T   D  + ++D RTG +         + +   + PDG  +A+G   + +  +D   +    +  F  EVN+  W   G +   T G+G+V+  ++PSL  + T+  H   C  +A DP GR+ A+ S D+ VS+WD   +  V T  + E  V+ +++++ G+Y+A   +   IDI +  TG  VH I   A +N   W+P R LLAYA      +++Y  ++    ++GF  A
Sbjct:   14 FQNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARIWHIDPYGHSKVKDI----ELKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDARTG-KCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMSGEKFFLTTGNGTVEVLAYPSLRALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVQTFTKLEWPVRTINFNHTGEYIASASEDLFIDIANVETGRSVHQIPCRAAMNSVEWNPKRNLLAYAGDD---KNKYQADEGVFRIFGFESA 320          
BLAST of Ggra6758.t1 vs. uniprot
Match: THOC3 (THO complex subunit 3 n=9 Tax=Brassicaceae TaxID=3700 RepID=THOC3_ARATH)

HSP 1 Score: 155 bits (393), Expect = 1.410e-41
Identity = 89/312 (28.53%), Postives = 149/312 (47.76%), Query Frame = 0
Query:    4 FHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRDRYVTEQPATYVWGF 315
            F  L S+   GH+  V +VAWN +G++L +        +++ +    S   +     E  GHT +++ +       D+  T   D  + ++D R+G +    V    + +   + PDG  VA+G   + +  +D   +    +  F  EVN+  W   G     T G G+V+  S+PSL  + T+  H   C  +A DPKGR+ A+ S D+ VS+WD   +  + T  + E  V+ + ++Y G+Y+A   +   IDI +  TG  VH I   A +N   W+P   LLAYA        +Y T++    ++GF
Sbjct:    8 FKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDL----ELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSG-KCTQQVELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN--PKYNTDEGVFRIFGF 312          
BLAST of Ggra6758.t1 vs. uniprot
Match: A0A2P2JSP7 (Uncharacterized protein n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A2P2JSP7_RHIMU)

HSP 1 Score: 155 bits (393), Expect = 2.400e-41
Identity = 88/315 (27.94%), Postives = 151/315 (47.94%), Query Frame = 0
Query:    4 FHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRDRYVTEQPATYVWGFPRA 318
            F +L S+   GH+  V +VAWN  G++L +        V+  +        +     E  GHT +++ +       D+  T   D  + ++D R+G +         + +   + PDG  +A+G   + +  +D   +    +  FG EVN+  W   G   + T G+G+V+  S+PSL  + T+  H   C  +A DPKGR+ A+ S D+ VS+WD   +  V T  + E  V+ + +++ G Y+A   +   IDI++  TG  VH I   A +N   W+P   LLAYA      +++Y  ++    ++GF  A
Sbjct:   31 FKNLHSRDYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKIKDI----ELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSG-KCSQQAELSGENINITYKPDGTHIAVGNRDDELTVLDVRKFKPLHRRKFGYEVNEIAWDTTGEMFLLTTGNGTVEVLSYPSLQALDTVMAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISEMLCVQTFTKLEWPVRTISFNHTGGYIASASEDLFIDISNVHTGRSVHQIPCRAAMNSVEWNPKYNLLAYAGDD---KNKYQADEGVFRIFGFESA 337          
BLAST of Ggra6758.t1 vs. uniprot
Match: A0A0L0G9M0 (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G9M0_9EUKA)

HSP 1 Score: 161 bits (408), Expect = 4.980e-41
Identity = 91/310 (29.35%), Postives = 152/310 (49.03%), Query Frame = 0
Query:    9 SKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSW-TVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRD--RYVTEQPATYVWGF 315
            +K   GH+  +  VAW+ DG++L +A   + + ++           + N ++   GHT  +E +  +    +   T   D  + ++DT+T +   +T  T  + +F+ W+PDG  +A   S++ +  VD     T  K   F  EVNQ  W   G  I+   G G +    WPS+D +  I+ H   C+ VA DPKGR++A+ S+DT  S+WD   ++++ T +     V  + +++ G YLA   +L++IDI+   +G  VH I         AWHPS+  LAY       +D  R     P   V+G+
Sbjct:  418 TKNFRGHKDKIRHVAWSYDGTQLASASSDNTIKIWHP------LLAQNNEINSLTGHTGPVEHMSFNPKIYNQLFTCSQDKSVRLWDTKTATCTNNTA-TKGENIFSAWSPDGKYIAFVNSNDVLTVVDVRKMDTPVKTQSFNDEVNQLSWNSTGEFIVLAMGSGMIQPIPWPSMDRVPPIKAHGGGCVSVAFDPKGRYLAVGSVDTQTSLWDLSEMASLRTFNSLGTPVVSLSFTFCGTYLASAAELDQIDISHVESGESVHQIELEGQCTAVAWHPSKHFLAYTAYSRTPKDDDRRTNPSPEVSVFGY 720          
BLAST of Ggra6758.t1 vs. uniprot
Match: THO complex subunit 3 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929F0E5 (THO complex subunit 3 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929F0E5)

HSP 1 Score: 154 bits (389), Expect = 5.350e-41
Identity = 87/312 (27.88%), Postives = 150/312 (48.08%), Query Frame = 0
Query:    4 FHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAMSTRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGSRAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFGGEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVACDPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLAMTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVRDRYVTEQPATYVWGF 315
            F +L S+   GH+  V +VAWN+ G++L +        V++          +     E  GHT +++ +       D+  T   D  + ++D RTG R         + +   + PDG  +A+G   + +  +D   +    +  F  E+N+  W   G     T G+G+V+  S+PSL+ + T+  H   C  +A DP GRF A+ S D+ VS+WD   +  V T  + E  V+ V ++Y G+YLA   +   ++IT+  TG   H I+  + +N   W+P   LLAYA      +++Y  ++    ++GF
Sbjct:    8 FKNLVSREYQGHKKKVHSVAWNITGTKLASGSIDHTARVWNIDPHGHGKVKDI----ELKGHTDSVDQLCWDPKHADLVATAAGDKTVRLWDARTG-RCSQQAELSGENINITYNPDGTHLAVGNKEDELTILDVRKFKPIHRRKFNYEINEIAWNITGDLFFITTGNGTVEVQSYPSLNVLHTLMAHTAGCYCIAMDPTGRFFAVGSADSLVSLWDIKEMLCVRTFTKLEWPVRTVSFNYTGEYLASASEDTFVEITNVQTGRTAHQIACKSPMNSVEWNPKYNLLAYAGDD---KNKYQNDEGVFRIFGF 311          
The following BLAST results are available for this feature:
BLAST of Ggra6758.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX449.940e-21988.71THO complex subunit 3 n=1 Tax=Gracilariopsis chord... [more]
R7QBY08.570e-12753.13THO complex subunit 3-like n=1 Tax=Chondrus crispu... [more]
A0A0M0J8631.400e-4429.06Tho complex subunit 3-like protein n=1 Tax=Chrysoc... [more]
A0A1J3J0C97.340e-4328.85THO complex subunit 3 (Fragment) n=5 Tax=Coluteoca... [more]
THO complex subunit 3-like n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CEC5572.290e-4231.32THO complex subunit 3-like n=1 Tax=Teleopsis dalma... [more]
A0A7C9CMZ55.750e-4227.62ANAPC4_WD40 domain-containing protein n=2 Tax=Pent... [more]
THOC31.410e-4128.53THO complex subunit 3 n=9 Tax=Brassicaceae TaxID=3... [more]
A0A2P2JSP72.400e-4127.94Uncharacterized protein n=4 Tax=Pentapetalae TaxID... [more]
A0A0L0G9M04.980e-4129.35Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
THO complex subunit 3 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929F0E55.350e-4127.88THO complex subunit 3 n=1 Tax=Dioscorea cayennensi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 140..178
e-value: 100.0
score: 4.3
coord: 181..220
e-value: 8.1E-5
score: 32.0
coord: 55..95
e-value: 5.4E-4
score: 29.3
coord: 99..137
e-value: 6.9
score: 11.7
coord: 5..44
e-value: 0.005
score: 26.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 13..36
e-value: 0.17
score: 12.8
coord: 185..220
e-value: 0.011
score: 16.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 188..229
score: 10.007177
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 12..53
score: 8.937796
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 150..300
e-value: 1.6E-18
score: 68.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..144
e-value: 5.6E-22
score: 80.3
IPR011659WD40-like beta propellerPFAMPF07676PD40coord: 150..169
e-value: 0.0052
score: 16.7
IPR040132TREX component Tex1/THOC3PANTHERPTHR22839THO COMPLEX SUBUNIT 3 THO3coord: 3..315
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 10..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:446652..447611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6758.t1Ggra6758.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 446652..447611 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6758.t1 ID=Ggra6758.t1|Name=Ggra6758.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=320bp
MSVFHDLESKRCFGHRSSVTAVAWNLDGSRLLAAGDASAVLVYDTQSLAM
STRPERNFLHECHGHTKNIEAIVPSQTSPDMFVTGGVDCLINVYDTRTGS
RAIHTVPTDSKCLFADWAPDGNTVAIGLSSNTVYFVDCLSWTVRKKMPFG
GEVNQFRWTPDGRRIMFTRGDGSVDAYSWPSLDHIITIQGHVDTCMGVAC
DPKGRFVAIASLDTCVSIWDSMSLSNVFTIDRWEKAVQLVDYSYEGQYLA
MTGDLEKIDITDASTGTLVHSISTVAVLNGFAWHPSRLLLAYAPMKVGVR
DRYVTEQPATYVWGFPRAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011659PD40
IPR040132Tex1/THOC3
IPR036322WD40_repeat_dom_sf