Ggra6750.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6750.t1
Unique NameGgra6750.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length542
Homology
BLAST of Ggra6750.t1 vs. uniprot
Match: A0A2V3IX92 (B-related factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX92_9FLOR)

HSP 1 Score: 701 bits (1809), Expect = 6.940e-249
Identity = 390/543 (71.82%), Postives = 420/543 (77.35%), Query Frame = 0
Query:    1 MSTQVQKCSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADGTSNFASMPGYSARATFTTMLNARHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEPTACDPPAFQRAQKVKQLKRKHAEIRKAQAKDAAIGKRKGIETDFPSAAGRLVRPEGDTVIDDASIQKQMQQVLASVEMQELDEESRQEEQLTAAVASRLPETDSDEDRRKADAEKEFAQENWKDAEN---HNEDLSDLEEEDMQMYFNTEEECRRKAVLWTEINKDYLEKQERLETMRRERPDDFKRLRPTRKAPKKKGSGAEKGQKTSTKGKKDVDTEPPAPKPSKKLNYAKLKQLALAAGQEVQT 540
            MS + QKCSACGS EIDFDAARGQASCMSCGEVLEQNAIVAEVGF EDARGRSNMVGQHVRADG SNFASMPGYSARATFTTMLNARH+LRQL S LKLHQRHTEAAERLFRL AERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDF+DVLETNVYLLGHTFLKF+QVV+LNLP+IDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTA +TAA+IV+RGGDDGKISSL ++ EP ACDPPAFQR+Q++K LKRK  E       D    KR+   + FPSA  +LV+ EGD   D A IQ+QMQ VLASVEMQEL+ ESR+EEQL A VAS+  E +S+  R       E   E  +D +    + EDLSDLEEED+  YFNTEEE RRK VLWTEINKDYLEKQERL                                                    KKLNYAKLKQLA+AAGQ+  T
Sbjct:    1 MSAETQKCSACGSYEIDFDAARGQASCMSCGEVLEQNAIVAEVGFVEDARGRSNMVGQHVRADGRSNFASMPGYSARATFTTMLNARHKLRQLVSALKLHQRHTEAAERLFRLAAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFADVLETNVYLLGHTFLKFSQVVALNLPVIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAGMTAAEIVARGGDDGKISSLNVDGEPIACDPPAFQRSQRLKDLKRKFVEGSGKDGSDVRAEKRQRTGSGFPSAQRQLVQGEGDNTTDVA-IQQQMQSVLASVEMQELERESREEEQLDAQVASQAVEKESNTSR-------ETTVEKGEDIDGGKEYQEDLSDLEEEDVNRYFNTEEEYRRKEVLWTEINKDYLEKQERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKLNYAKLKQLAMAAGQQTTT 535          
BLAST of Ggra6750.t1 vs. uniprot
Match: R7QQ93 (B-related factor 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ93_CHOCR)

HSP 1 Score: 508 bits (1309), Expect = 9.190e-173
Identity = 295/554 (53.25%), Postives = 373/554 (67.33%), Query Frame = 0
Query:    1 MSTQVQKCSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADGT-SNFASMPGYSARATFTTMLNARHRLRQLASTLKLH-QRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEPTACDPPAFQRAQKVKQLKRKHAEIRKAQAKDAAIGKRKGIETDFPSAAG-------RLVRPEGDTVIDDASIQKQMQQVLASVEMQELDEESRQEEQLTAAVASRLPETDSDEDRRKADAEKEFAQENWKDAENHNED----------LSDLEEEDMQMYFNTEEECRRKAVLWTEINKDYLEKQERLETMRRERPDDFKRLRPTRKAPKKKGSGAEKGQKTSTKGKKDVDTEPPAPKPSKKLNYAKLKQLALAAG 535
            MST   KC  C S +ID D ARG+A+C+ CG VLEQN IV+EVGF+EDARGRSN++GQHVRADG  S++ ++ G+S  AT  TM N + RL  LAS+L L+ Q++TE A RLFR+  ERNFH+GRR+ANVCCACLY VCR+E+T HMLLDF+DVLETN+Y LGHTFLK  +++S+ LPIIDPSLYIHRFA+KLEFG+ TNAVAM+ALR++ARMQRDW++ GRRPS LCGAAL+ AA MH F+RS  DV RVVRIGNV LR+RL EL+ T TA LTAAQI + GGDDGK +SL + +   ACDPPAFQR +  + L  K      A ++ A        E +  S AG       R+   +G    +D  ++ +  +VLAS E+QEL++E+  EE+L  A   R              AEKE   E   D+E+  +D          LS     D + Y NTEEE  RK  LWTE+NK+YLEKQE+LE M+RE P+++KRLRP R   KKK + A  G+ +    K D + +P APKPSKKLNY+ LK L    G
Sbjct:    1 MSTSALKCPNCDSYDIDTDTARGEATCVECGTVLEQNLIVSEVGFSEDARGRSNVIGQHVRADGRLSSYGALRGFSREATELTMQNGKRRLGHLASSLGLNTQKYTEGALRLFRVAVERNFHKGRRMANVCCACLYIVCRMERTAHMLLDFADVLETNLYDLGHTFLKLGKILSIQLPIIDPSLYIHRFANKLEFGEVTNAVAMSALRLIARMQRDWMNEGRRPSGLCGAALLIAARMHDFYRSQADVTRVVRIGNVALRDRLTELHNTSTATLTAAQIDAGGGDDGKWTSLNISDGSEACDPPAFQRLEARRALLAKRKRTNDADSETA--------EDESCSTAGGGSVKKVRITPGKGGRTTEDEQLEGEFAKVLASSELQELEQETNVEEELVLAAQKRRA------------AEKETDLEG--DSEDEEDDXXXXXXXXGXLSXXXXXDAEKYLNTEEEYERKKELWTEVNKEYLEKQEKLERMKRENPEEYKRLRPWRNTQKKKKT-ARSGKTSRGTEKDDEEPQPVAPKPSKKLNYSVLKTLGEPGG 531          
BLAST of Ggra6750.t1 vs. uniprot
Match: A0A7S1TLS9 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLS9_9RHOD)

HSP 1 Score: 363 bits (932), Expect = 1.260e-116
Identity = 202/413 (48.91%), Postives = 272/413 (65.86%), Query Frame = 0
Query:    8 CSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADG--TSNFASMPGYSARATFTTMLNARHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEP-----TACDPPAFQRAQKVK---------------------------------QLKRKHAEIRKAQAKDAAIGKRKGIETDFPSAAGRLVRPEGDTVIDDASIQKQMQQVLASVEMQELDEE 380
            C  CG +  + DA RG   C SCG V+E+NAIVAEV F ED+RGRS+++GQHVR+DG       S+ G+S  ++  T+ NAR ++  LAS L L  +HTEAA RLFRLG + NFH+GR+L NVCCA LY VCR++KTPHMLLDFSDVL+ N+Y LG+TF+KF +++SL++PI+DPSLYIHRFASKLEFGDKT+ VAM+ALR++ARM+RDW+SHGRRPS LCGAAL+ AA MH F+R+ V+V RVVRIG++TL +R+ E++KT +A LT  Q+ + GGDDGK S+L +          A DPPA+ R  + K                                 Q  R+H+++ +A   + A  K           +   V+   D+  DDA+ + +MQ VLAS EM+ L+E+
Sbjct:   49 CPNCGGEVFETDAQRGDKVCTSCGTVVEENAIVAEVTFQEDSRGRSSVIGQHVRSDGKPAGGMGSLSGFSRESSELTVANARRQILYLASALSLSAQHTEAAMRLFRLGVQHNFHKGRKLGNVCCASLYVVCRMQKTPHMLLDFSDVLQANLYDLGNTFVKFVRLLSLDVPIVDPSLYIHRFASKLEFGDKTHTVAMSALRLVARMKRDWMSHGRRPSGLCGAALIIAARMHNFYRTYVEVVRVVRIGSITLSDRIAEMHKTASAKLTLEQVDAGGGDDGKESTLRIVSPSGASTGAAADPPAYTRLLERKARLSAPLASTDISGESSVQNLAQRGTGSSSYRSQSAREHSDLTQASEPERACDK-----------SDDQVQALRDS--DDAAAEAEMQAVLASNEMRALEED 448          
BLAST of Ggra6750.t1 vs. uniprot
Match: M2XUX0 (B-related factor 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUX0_GALSU)

HSP 1 Score: 325 bits (832), Expect = 3.420e-101
Identity = 206/477 (43.19%), Postives = 288/477 (60.38%), Query Frame = 0
Query:    1 MSTQVQKCSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADG--TSNFASMPGYSARATFTTMLNARHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEPTACDPPAFQRAQKVKQLKRKHAEIRKAQAKDAAIGKRKGIETDFPSAAGRLVRPEGDTVID--DASIQKQMQQVLASVEMQELDEESRQEEQLTA-----AVASRLPE-TDSDEDRRKADAEKEFAQENWKDAENHNEDLSDLEEEDMQMYFNTEEECRRKAVLWTEINKDYLEKQERL 467
            +S   +KC  CGS E++ DAA+G   C  CG ++E+N IV+EV F E   G S++VGQ V + G   S+   +PG S  +   T  N R  + ++   L L+    E A R+F L  E NF +GR+ +NVC +CLY VCR EKTPH+L+DFSD L+TNVY LG TFLKFA++++L+LPIIDPSLYIHRFASKL F +KT+AVA +ALR++ARM+RDW+  GRRPS LCGAAL  AA MH F+RS  ++  VVRIG+VTLR+RL EL +TP+A LTA +I + GGDDG + +L    +    DPP+F+R        R++ E           G+   IE +   A    +  E   +I+  + S +     + A+    E    SR  +++T+     +VA    E T+S+  +   D E     E+  D      DL D++EE++  Y N EEE ++K  LWT +N+DYLE+Q  L
Sbjct:   19 ISNTGRKCPHCGSTELEHDAAQGNTVCTQCGCIVEENTIVSEVTFVEGPGGHSSVVGQFVDSSGYVPSSGVIIPGLSKESREATRNNGRKIIAEVVGALHLNPSQEEQAFRMFLLAIEHNFLQGRKASNVCASCLYIVCRREKTPHLLIDFSDYLQTNVYDLGRTFLKFARILNLSLPIIDPSLYIHRFASKLGFEEKTHAVATSALRLIARMKRDWIHTGRRPSGLCGAALFVAAKMHGFYRSQREIVNVVRIGDVTLRKRLLELEETPSALLTADEIDAMGGDDGNVEALSDINKFKESDPPSFKR--------RRNLEY---------YGEEDVIEREMNEA----LNSEEVKMIERGEQSAESMTHPIFAADFSSETF--SRVTDEMTSGYLDDSVALNGSEVTNSNGHQSSKDEESLETDEDXXDL-----DLFDIDEEELNSYLNNEEEEQQKRELWTRLNQDYLERQAEL 467          
BLAST of Ggra6750.t1 vs. uniprot
Match: A0A7S0T4Q7 (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4Q7_9RHOD)

HSP 1 Score: 304 bits (779), Expect = 7.030e-96
Identity = 170/325 (52.31%), Postives = 223/325 (68.62%), Query Frame = 0
Query:   70 SMPGYSARATFTTMLNARHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSL-ILE------------EEPTACDPPAFQRAQKVKQLKRKHAEIRKAQAKDAAIGKRKGIETDFPSAAGRLVRPEGDTVID--DASIQKQMQQVLASVEMQELDE 379
            S+ G+S  +   T+ NAR ++  LASTL L   H+EAA RLFRLG ERNFH+GR+L NVCCA LY VCR+EKTPHMLLDFSDVL+ N+Y LG+TF+KF +++SL++PI+DPSLYIHRFASKLEFGDKT+ VAM+ALR++ARM+RDW+SHGRRPS LCGAAL+ AA MH F R+ V+V RVVRIG++TL +R+ E++ T +A LT  Q+ + GGDDGK  +L IL             E P+A DPPA+ R             +RK +A +  I      ET     A R    EG    D  D + + ++++VLAS EM+ L++
Sbjct:    5 SLSGFSRESAELTISNARRQILHLASTLSLSSHHSEAALRLFRLGVERNFHKGRKLGNVCCASLYVVCRMEKTPHMLLDFSDVLQANLYELGNTFVKFVRLLSLDIPIVDPSLYIHRFASKLEFGDKTHVVAMSALRLVARMKRDWMSHGRRPSGLCGAALIIAARMHNFFRTNVEVVRVVRIGSITLSDRIAEMHATTSAKLTLEQLDTGGGDDGKEDTLRILAPRGGERGPESSLEAPSAADPPAYTR-------------LRKREAVEKQID-----ETPVARGARRERSEEGVPGGDELDKNTEAEIEEVLASAEMRALEQ 311          
BLAST of Ggra6750.t1 vs. uniprot
Match: A0A7S4BVT8 (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BVT8_CHRCT)

HSP 1 Score: 296 bits (759), Expect = 6.510e-92
Identity = 156/309 (50.49%), Postives = 209/309 (67.64%), Query Frame = 0
Query:    8 CSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADGTSNFASMPGYSARATFTTMLNARHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEPTACDPPAFQRAQKVKQLKRK 316
            CS CG  +I+ DA+RG A C+ CG VLE+N IV EV FA+DA G S++VGQ V A    N     G++  +      N +  + QLA+ L+L   H EAA RLF L  + NF +GR+  +V  ACLY VCR EKT H+L+D+SDVL+TNVYLLG  FLKF +++SL LPIIDPSLYIHRFASKLEFGD+T+ V+M+ALR++ RM+RDW+  GRRPS +CGAAL+ AA +H F R+  +V RVVRI +VTLR+RL E + T    LTA Q+           ++ L+    A DPP+F R ++++  +R+
Sbjct:    4 CSQCGGTDIEIDASRGDAVCIQCGNVLEENTIVNEVTFAQDAGGGSSVVGQFVSATPGRNVGL--GFNRESREVAFANGQRHISQLAAALRLADHHQEAANRLFHLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYLLGSCFLKFTRILSLTLPIIDPSLYIHRFASKLEFGDRTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLDEFSDTAVGVLTAQQL----------ETIDLQNYGVAADPPSFSRNRRLEAEQRR 300          
BLAST of Ggra6750.t1 vs. uniprot
Match: A0A0M0JU91 (Brf1 subunit of RNA polymerase iii transcription initiation factor iiib n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU91_9EUKA)

HSP 1 Score: 294 bits (752), Expect = 3.470e-91
Identity = 160/301 (53.16%), Postives = 206/301 (68.44%), Query Frame = 0
Query:    6 QKCSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADGTSNFASMPGYSARATFTTMLNARHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEPTACDPPAFQR 306
            Q C  CGS +I+ DA RG A C+ CG VLE+NAIV EV FA+DA G S +VGQ+V A      + +    +R       N +  + QLA+ L+L + H EAA+RLF L  + NF +GRR  +V  ACLY VCR EKTPH+L+D+SDVL+ NVYLLG  FLKF +++SL LPIIDPSLYIHRFAS+LEFGDKT+ V+M+ALR++ RM+RDW+  GRRPS +CGAAL+ AA +H F R+  +V RVVRI +VTLR+RL E  +TP  ALTA Q+ S            +E  P A DPP++ R
Sbjct:    4 QCCPNCGSTDIETDAQRGDAVCIQCGTVLEENAIVNEVTFAQDAGGGSQVVGQYVAATPGVGSSGLGFKESREL--AFNNGQRHISQLAAALRLAEHHQEAAQRLFMLAVQHNFIQGRRTQHVIAACLYTVCRKEKTPHLLIDYSDVLQENVYLLGSCFLKFTRLLSLTLPIIDPSLYIHRFASRLEFGDKTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLTEFAETPMGALTARQLESAD----------IEAFPAA-DPPSYTR 291          
BLAST of Ggra6750.t1 vs. uniprot
Match: A0A7S0IX97 (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IX97_9EUKA)

HSP 1 Score: 288 bits (738), Expect = 2.760e-88
Identity = 151/297 (50.84%), Postives = 200/297 (67.34%), Query Frame = 0
Query:    8 CSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADGTSNFASMPGYSARATFTTMLNARHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEPTACDPPAF 304
            CS CG  +I+ D +RG A C+ CG VLE+N IV EV FA+D+ G S++VGQ V A      A + G+   +      N +  + QLA+ L+L   H EAA+RLF L  + NF +GR+  +V  ACLY VCR EKT H+L+D+SDVL+TNVY+LG  FLKF +++SL LPIIDPSLYIHRFASKLEFGDKT+ V+M+ALR++ RM+RDW+  GRRPS +CGAAL+ AA +H F R+  +V RVVRI +VTLR+RL E  +T   +LTA Q+           ++ L       DPP+F
Sbjct:    2 CSQCGGTDIEIDPSRGDAVCIQCGNVLEENTIVNEVTFAQDSGGGSSVVGQFVSATPGVRSAGL-GFGRESREVAYTNGQRHISQLAAALRLADHHQEAAQRLFNLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYMLGSCFLKFTRLLSLTLPIIDPSLYIHRFASKLEFGDKTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLNEFGETALGSLTAQQL----------ETIDLSTYGDFADPPSF 287          
BLAST of Ggra6750.t1 vs. uniprot
Match: A0A7J7IDI4 (B-related factor 1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDI4_9RHOD)

HSP 1 Score: 298 bits (762), Expect = 4.110e-88
Identity = 194/542 (35.79%), Postives = 301/542 (55.54%), Query Frame = 0
Query:    2 STQVQKCSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADGTSNFASMPGYSARATFTTMLNA-----------------------RHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVS-----------------RGGDDGKISSLILEEEPTA--CDPPAFQRAQKV--KQLKRKHAEIRKAQAK------DAAIGKRKGIETDFPSAAGRLVRPEGDTVIDDASIQKQMQQVLASVEMQELDEESRQEEQLTAAVASRLPETDSDEDRRKADAEKEF------------AQENWKDAENHNEDLSDLEEEDMQMYFNTEEECRRKAVLWTEINKDYLEKQERLETMRRERPDDFKRL 481
            +  +++C +CGS+E++F ++ GQ +C+ CG+V+E+NA+V E+ F E A G S +VGQ +R    S+  ++ G S  AT   +  A                       R R+  +AS L L  R  +AA RLF L  + NF +GRR  NV  A LY VCR EKTPH+L+DFSD L  NVY+LGHT+LK  +V+ L+LPIIDPS YIHRFAS+LEFG+K N VA TALR+++RM+RDW+  GRRP+ LCGAAL+ +A MH F RS  ++  VVR+G++T+R+RL E+ +TPTA LT   + S                   GD+    + ++EE  +   CDPPAF+R Q +  + L+++   +++ ++       D ++ +++    +  SAA    R     ++  A+    +   + SV          + E + + +   LP  D D DRR ++AE E             A   W       E+LSDL+ ++  M+  T EE   +  +WT +N++++E++  +    R+ P+ ++RL
Sbjct:   92 AASLRRCPSCGSEELEFMSSSGQTTCIVCGQVIEENAVVNELQFMEGAGGHSAVVGQFIRTG--SSGTAVAGASTAATTLMLYGASAVGMARLTIGHRESREVTYAAGRRRIATIASQLHLPPRFVDAAHRLFTLAVQHNFVQGRRTQNVAAAALYIVCRREKTPHLLIDFSDALRINVYVLGHTYLKLCRVLHLSLPIIDPSFYIHRFASRLEFGEKQNLVAQTALRLISRMKRDWIHTGRRPAGLCGAALLISARMHGFRRSQREISAVVRVGDMTIRQRLSEIEETPTATLTGRDLESDTNATERLHVDKDTVMETTGDETPFVAALMEETSSVDGCDPPAFRRRQPLPLEWLEQQQHILQQYESSELNAVVDTSLTEQERAFLEA-SAAAEGQRVPVTVLVASAAPNGSVSNYVGSV---------CRSEPIRSPLNGTLPSAD-DPDRRMSNAESERMATDAGPASALEANRRW--VSERVEELSDLDSDEEAMFVCTPEETAFREKIWTAMNQEWIEREAEIARWERDDPERYQRL 618          
BLAST of Ggra6750.t1 vs. uniprot
Match: A0A3P3YAP5 (B-related factor 1 n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YAP5_PLABS)

HSP 1 Score: 287 bits (734), Expect = 1.730e-86
Identity = 183/466 (39.27%), Postives = 271/466 (58.15%), Query Frame = 0
Query:   11 CGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDARGRSNMVGQHVRADGT----SNFASMPG---YSARATFTTMLNARHRLRQLASTLKLHQRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFSDVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAVAMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVVRIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEPTACDPPAFQRAQKVKQLKRKHAEIRKAQAKDAAIGKRKGIETDFPSAAGRLVRPEGDTVIDDASIQKQMQQVLASVEMQELDEESRQEEQLTAAVASRLPETDSDEDRRKADAEKE----FAQENWKDAENHNEDLSDLEEEDMQMYFNTEEECRRKAVLWTEINKDYLEKQE 465
            CG  +I+++ +RG A+CMSCG VL +N IV ++ F +DA G S+MVGQ V A G     +      G   Y+  +   T+   R R++ +A  L++ + H EAA RLF L  + NF +GR+  +V  ACLY VCR EKT H+L+DFSDVL+TNV++LG TF+KF +++++++PIIDPSL++HRFA++LEF DKT+ VAMTALR+++RM+RDW++ GRRP+ +CGA+L+ AA +H F RS  +V R+V+I   TLR+R+ E  +TP+A  T ++  +   D                DPP+F+ A         H  +++ + K+        + +D    AG          ID+  +Q +MQ+VL S EM EL  E   +   T  V S      +  +   A AE      FA +   D      D SD EE D QM  +  E+  ++ V W EINK+YL++QE
Sbjct:    5 CGGTDIEYNQSRGDATCMSCGAVLSENQIVTDLSFVQDAAGSSSMVGQFVPASGPVPLGAGARQQRGGKLYTTESREVTIARGRARIQHVAMLLQMTRHHCEAANRLFMLAIQHNFIQGRKTDHVVAACLYIVCRREKTQHLLIDFSDVLQTNVFILGKTFMKFVRLLNISMPIIDPSLFVHRFAARLEFDDKTHLVAMTALRLVSRMRRDWMAVGRRPAGICGASLIIAARLHGFRRSQKEVGRIVKICEATLRKRILEFIETPSAYQTVSEFNATPDDFA-----------AEMDPPSFRAA---------HRFVQRHEVKN--------VSSDDSEDAGA-------EDIDEDELQSEMQKVLNSNEMNELSRELAADVSQTPPVPSTTGGEPAASENAAASAESPTAAVFANKGTGDV-----DGSDDEEID-QMLLSVNEQASKEKV-WLEINKEYLQQQE 428          
The following BLAST results are available for this feature:
BLAST of Ggra6750.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX926.940e-24971.82B-related factor 1 n=1 Tax=Gracilariopsis chorda T... [more]
R7QQ939.190e-17353.25B-related factor 1 n=1 Tax=Chondrus crispus TaxID=... [more]
A0A7S1TLS91.260e-11648.91Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
M2XUX03.420e-10143.19B-related factor 1 n=1 Tax=Galdieria sulphuraria T... [more]
A0A7S0T4Q77.030e-9652.31Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A7S4BVT86.510e-9250.49Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A0M0JU913.470e-9153.16Brf1 subunit of RNA polymerase iii transcription i... [more]
A0A7S0IX972.760e-8850.84Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7J7IDI44.110e-8835.79B-related factor 1 n=1 Tax=Cyanidiococcus yangming... [more]
A0A3P3YAP51.730e-8639.27B-related factor 1 n=2 Tax=Plasmodiophora brassica... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 130..149
score: 36.0
coord: 20..40
score: 33.97
coord: 183..201
score: 29.12
coord: 252..266
score: 27.11
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 6..531
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 182..266
e-value: 0.44
score: 14.4
coord: 88..169
e-value: 0.0065
score: 25.7
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 86..152
e-value: 4.8147E-7
score: 45.6925
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 177..264
e-value: 4.49139E-5
score: 40.2997
IPR011665Brf1, TBP-binding domainPFAMPF07741BRF1coord: 429..530
e-value: 3.0E-10
score: 40.3
IPR013150Transcription factor TFIIB, cyclin-like domainPFAMPF00382TFIIBcoord: 175..266
e-value: 1.0E-21
score: 76.7
coord: 82..168
e-value: 9.7E-19
score: 67.2
NoneNo IPR availableGENE3D1.20.5.650Single helix bincoord: 421..471
e-value: 5.6E-11
score: 43.9
NoneNo IPR availableGENE3D1.10.472.10coord: 179..270
e-value: 3.6E-23
score: 83.6
NoneNo IPR availableGENE3D1.10.472.10coord: 77..178
e-value: 6.5E-24
score: 85.9
NoneNo IPR availableGENE3D2.20.25.10coord: 1..42
e-value: 3.8E-7
score: 31.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..515
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..436
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 4..46
IPR013137Zinc finger, TFIIB-typePFAMPF08271TF_Zn_Ribboncoord: 7..47
e-value: 7.5E-10
score: 38.2
IPR013137Zinc finger, TFIIB-typePROSITEPS51134ZF_TFIIBcoord: 4..35
score: 8.302019
IPR029529Transcription factor IIIB subunit Brf1PANTHERPTHR11618:SF4TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNITcoord: 6..531
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 177..270
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 85..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:348710..350335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6750.t1Ggra6750.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 348710..350335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6750.t1 ID=Ggra6750.t1|Name=Ggra6750.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=542bp
MSTQVQKCSACGSDEIDFDAARGQASCMSCGEVLEQNAIVAEVGFAEDAR
GRSNMVGQHVRADGTSNFASMPGYSARATFTTMLNARHRLRQLASTLKLH
QRHTEAAERLFRLGAERNFHRGRRLANVCCACLYAVCRIEKTPHMLLDFS
DVLETNVYLLGHTFLKFAQVVSLNLPIIDPSLYIHRFASKLEFGDKTNAV
AMTALRILARMQRDWLSHGRRPSSLCGAALMCAAGMHQFHRSMVDVCRVV
RIGNVTLRERLQELNKTPTAALTAAQIVSRGGDDGKISSLILEEEPTACD
PPAFQRAQKVKQLKRKHAEIRKAQAKDAAIGKRKGIETDFPSAAGRLVRP
EGDTVIDDASIQKQMQQVLASVEMQELDEESRQEEQLTAAVASRLPETDS
DEDRRKADAEKEFAQENWKDAENHNEDLSDLEEEDMQMYFNTEEECRRKA
VLWTEINKDYLEKQERLETMRRERPDDFKRLRPTRKAPKKKGSGAEKGQK
TSTKGKKDVDTEPPAPKPSKKLNYAKLKQLALAAGQEVQTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013763Cyclin-like
IPR011665BRF1_TBP-bd_dom
IPR013150TFIIB_cyclin
IPR013137Znf_TFIIB
IPR029529Brf1
IPR036915Cyclin-like_sf