Ggra6739.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6739.t1
Unique NameGgra6739.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length126
Homology
BLAST of Ggra6739.t1 vs. uniprot
Match: A0A2V3IGQ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGQ0_9FLOR)

HSP 1 Score: 167 bits (424), Expect = 2.340e-51
Identity = 75/116 (64.66%), Postives = 96/116 (82.76%), Query Frame = 0
Query:   10 QQTFESTWQEMADRMRDTNETLPLADWHHILDVCIRTNETPEKGIWILNLMREVDVKPTAGTYERILTLCDEKNDRAAAFHLVELMFKDKILLGDVQLPEGMEEMLRTILPPEAFE 125
            QQTFE+TW  ++ RMRDTNE+ PLADWH +L+ C  + + P K IW+LNLMR+++ + TA +YER+L +C+E  DRAAAFHLVELMF+DK+ LGDVQLP+GMEE LR+ILPPEAFE
Sbjct:   18 QQTFETTWNTLSARMRDTNESPPLADWHRLLEACEFSEDGPSKAIWVLNLMRKLETRATAASYERVLQVCNEHGDRAAAFHLVELMFEDKVKLGDVQLPDGMEETLRSILPPEAFE 133          
BLAST of Ggra6739.t1 vs. uniprot
Match: A0A7S1XGS3 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XGS3_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 3.430e-26
Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 0
Query:   14 ESTWQEMADRMRDTNETLPLADWHHILDVCIRTNETPEKGIWILNLMREVDVKPTAGTYERILTLCDEKNDRAAAFHLVELMFKDKILLGDVQLPEGMEEMLRTILPPEAF 124
            E+ W + A +M++ +E+ P+  W+ +L V    N+  E+G WI+N MR+   +P+AG+YE +L  C    +   AF LVE M+ DK+  GDV LP+GME+ LR ILPP+AF
Sbjct:   44 EAAWTQFAAKMKEADESPPVDAWNELLQVAADANDF-ERGAWIMNTMRDTGRRPSAGSYEIMLESCIRTQNNKGAFFLVEQMYNDKVPFGDVSLPDGMEDTLRAILPPDAF 153          
BLAST of Ggra6739.t1 vs. uniprot
Match: A0A7S1ER26 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER26_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 5.400e-26
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 0
Query:   14 ESTWQEMADRMRDTNETLPLADWHHILDVCIRTNETPEKGIWILNLMREVDVKPTAGTYERILTLCDEKNDRAAAFHLVELMFKDKILLGDVQLPEGMEEMLRTILPPEAF 124
            ES W + A++M++TNE   + +W+ ++ +    N+   +G+W +  M++  V P+  TYE +L  C    +   AFHLVELM+ DKI LGD+ LPEGME  LR ILPPEAF
Sbjct:   61 ESAWIKFAEKMKETNEVPDVDEWNKLIQLASDENDFA-RGVWFIKTMKDTGVTPSPRTYEVLLESCIRTKNNQGAFHLVELMYDDKIPLGDMPLPEGMEATLRAILPPEAF 170          
The following BLAST results are available for this feature:
BLAST of Ggra6739.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IGQ02.340e-5164.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XGS33.430e-2643.24Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S1ER265.400e-2644.14Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 8..106
e-value: 6.0E-7
score: 31.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:326253..326630 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6739.t1Ggra6739.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 326253..326630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6739.t1 ID=Ggra6739.t1|Name=Ggra6739.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=126bp
MSASAETTRQQTFESTWQEMADRMRDTNETLPLADWHHILDVCIRTNETP
EKGIWILNLMREVDVKPTAGTYERILTLCDEKNDRAAAFHLVELMFKDKI
LLGDVQLPEGMEEMLRTILPPEAFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf