Ggra6737.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6737.t1
Unique NameGgra6737.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length336
Homology
BLAST of Ggra6737.t1 vs. uniprot
Match: A0A2V3IGM0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGM0_9FLOR)

HSP 1 Score: 461 bits (1187), Expect = 9.390e-161
Identity = 241/342 (70.47%), Postives = 267/342 (78.07%), Query Frame = 0
Query:    8 PAPVASRARRLTPAVCPRAARGAPVRW-SCCASPLDPVEAAVADGETLRQQLAAVSDSRRKQAERTNEALMNMAAQISAITAKLRADAGMPPVADPPPPSAAVDRAVATPSVVSED-------------DASSAADEPYMDPKNFGYESTAGWQVLEASEHLPENERDLQFRIECDMHGCSLIEVKRDAPPGPGVRHNFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWAQALGQPASGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLGIE 335
            P P+ +R+     A C R      V W +C ASP D V AA+ +G+ LR +L  +S+SRR QAERTN AL  MA +IS I AKLRADAGMPPVA+ P  SA                            DAS+A+DEPYMDPKNFGYESTAGWQVL+AS+ LPENE +LQFRIECDMHGCSLI+VK DAPPGPGVR N++QSG  FRVG+DPEAPKSFCAMVGNDQWL+ALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLD SVEHESKLVW QA+GQP+ G+YCIRAIFMEGRQSECFWA ETVPNLLAALN LG+E
Sbjct:    9 PPPLTARSALRRRAACSR------VAWRACAASPRDDVLAAIREGQQLRDRLDELSESRRAQAERTNSALEQMANKISEINAKLRADAGMPPVAESPVTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASAASDEPYMDPKNFGYESTAGWQVLQASDELPENEGNLQFRIECDMHGCSLIQVKGDAPPGPGVRQNYVQSGARFRVGYDPEAPKSFCAMVGNDQWLIALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDFSVEHESKLVWVQAIGQPSLGQYCIRAIFMEGRQSECFWARETVPNLLAALNNLGVE 344          
BLAST of Ggra6737.t1 vs. uniprot
Match: R7Q859 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q859_CHOCR)

HSP 1 Score: 390 bits (1002), Expect = 5.990e-134
Identity = 189/258 (73.26%), Postives = 215/258 (83.33%), Query Frame = 0
Query:   79 MAAQISAITAKLRADAGMPPVADPPPPSAAVDRAVATPSVVSEDDASSAADEPYMDPKNFGYESTAGWQVLEASEHLPENER-DLQFRIECDMHGCSLIEVKRDAPPGPGVRHNFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWAQALGQPASGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLGIE 335
            M+ Q++ I AKLRADAGMPPVA+PP  SAA   A                 EPYMDP NFGYESTAGWQVL A++ LPEN   +++FRIECDM+GCS+IEVK DAPPGPGVR  FI +G GFRVG+DPEAPK FC MVGNDQWL+AL+YDEIRHFKRLCLSLQK+MDRIGRGEEDPP+KKPAVRRSGDGMFNMR+ARAGLDCSVE ESKLVW QA+GQP SG+YCIRAIFMEGRQSE FWA +TVP++L++LNKLG+E
Sbjct:    1 MSDQLAKIVAKLRADAGMPPVAEPPSDSAAAPEAPXXXXXXXXXXXXXXXXEPYMDPSNFGYESTAGWQVLSATDELPENASGNVEFRIECDMNGCSIIEVKGDAPPGPGVRQRFIHAGPGFRVGYDPEAPKGFCGMVGNDQWLLALNYDEIRHFKRLCLSLQKKMDRIGRGEEDPPMKKPAVRRSGDGMFNMRIARAGLDCSVELESKLVWVQAIGQPVSGQYCIRAIFMEGRQSEGFWAPDTVPSMLSSLNKLGVE 258          
BLAST of Ggra6737.t1 vs. uniprot
Match: A0A1X6NI03 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NI03_PORUM)

HSP 1 Score: 208 bits (529), Expect = 5.090e-63
Identity = 110/211 (52.13%), Postives = 139/211 (65.88%), Query Frame = 0
Query:  133 MDPKNFGYESTAGWQVLEASEHLPENERD--LQFRIECDMHGCSLIEVKRDA--PPGPGVRHNFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPA--VRRSGDGMFNMRVA--RAGLDCSVEHESKLVWAQALGQPASGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLGIE 335
            MDP  FG +STAGWQ L++   LP       + FRIECD HGCSLI ++ DA  P G GVR  F+  G G+RVG+DPE+P+S+C MVG  +WL+AL  DE+ H KRL L+L+K+M RI  GEE+PP K      RRSGDGMF+ RV+     +  SVE ESKL+W QA G P +  Y IR I ME RQ+E  W +  VP LL+A+ KL +E
Sbjct:    1 MDPSTFGMDSTAGWQTLQSESDLPSGSDGDAVSFRIECDAHGCSLI-MQPDAGEPTGAGVRKQFVMEGDGYRVGYDPESPRSYCGMVGTSEWLLALDRDEVGHLKRLLLALKKKMRRIASGEEEPPKKGNIGHARRSGDGMFHERVSSWEGDIPVSVELESKLMWVQAFGVPEA--YGIRVILMERRQAEGVWPAAVVPGLLSAVGKLRVE 208          
BLAST of Ggra6737.t1 vs. uniprot
Match: A0A7J7IJL2 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJL2_9RHOD)

HSP 1 Score: 123 bits (309), Expect = 1.500e-28
Identity = 78/213 (36.62%), Postives = 109/213 (51.17%), Query Frame = 0
Query:  127 AADEPYMDPKNFGYESTAGWQVLEASEHLPENERDLQFRIECDMHGCSLIEVKRDAPPGP-GVRHNFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCS-----VEHESKLVWAQALGQPASGKYCIRAIFMEG-RQSECFWASETVPNLLAALNKL 332
            AA  P +D    G +         A+E   +N    +  +ECD++GC  + ++ ++     GVR   + SG GFRVG+DP AP S CA+VG+D W +ALS +E RHF+RL  +LQ +M  I  G    P       RSGDG    R++    D        E ES L+W  A G P S  Y +R I + G R  E  W ++ VP+L A L +L
Sbjct:  177 AAATPSLD--EMGQQFQGDEYAAPATEPPQQNNEPARMIVECDINGCCSLIIRDESNANVRGVRPKHVFSGPGFRVGYDPAAPPSDCALVGDDHWTIALSREEFRHFRRLAQALQYKMGDITAGRVSKPAASGVPVRSGDGFCKERLSWNTADGESSKIVAEFESSLMWLGASGNPFS--YDLRLILLGGNRIVEGVWPAQVVPSLFAKLMEL 385          
BLAST of Ggra6737.t1 vs. uniprot
Match: M1V5V2 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V5V2_CYAM1)

HSP 1 Score: 118 bits (295), Expect = 1.500e-26
Identity = 79/215 (36.74%), Postives = 109/215 (50.70%), Query Frame = 0
Query:  127 AADEPYMDPKNFGYESTAGWQVLEASEHLP-ENERDLQFRIECDMHGC-SLIEVKRDAPPGPGVRHNFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCS-----VEHESKLVWAQALGQPASGKYCIRAIFMEGRQS--ECFWASETVPNLLAALNKL 332
            AA  P +D      +   G +    +  LP +     Q  +ECD++GC SLI    D     GVR  ++ SG GF++G DP AP S CA+VG+D W +ALS +E RHF+RL  +LQ +M  I  G    P  +     SGDG    R++    D        E ES L+W  A G P S  Y +R I + GR+   E  W ++ VP+L A L +L
Sbjct:  181 AASTPNLDEMG---QQLQGDEYSAPAMELPIQKSEPAQMIVECDINGCCSLIVRDGDHSAPRGVRPQYVFSGPGFKIGHDPAAPPSDCALVGDDHWTIALSREEFRHFRRLVQALQYKMGDIMNGVASKPTAQGVPVHSGDGFCKERISWNASDGESSRIVAEFESSLMWLGASGSPYS--YDLRLILL-GRERIVEGLWPAQVVPSLCAKLMEL 389          
BLAST of Ggra6737.t1 vs. uniprot
Match: A0A2T1C6P5 (DUF1818 domain-containing protein n=1 Tax=Merismopedia glauca CCAP 1448/3 TaxID=1296344 RepID=A0A2T1C6P5_9CYAN)

HSP 1 Score: 67.4 bits (163), Expect = 2.660e-10
Identity = 41/142 (28.87%), Postives = 69/142 (48.59%), Query Frame = 0
Query:  193 IQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWAQALGQPASGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLGI 334
            ++SG+G+R+G++PEA + F  +VG+D W + L+  E+  F +L   L   M+ I     D                     +  + C  E E+ L+W +  G P +  Y +R I   GR+SE +W+   VP+L  A+  L +
Sbjct:    5 VKSGLGWRIGWNPEAGE-FTGLVGSDDWAIELTQAELEDFCQLLSQLSTSMEAIAHELMD---------------------QEKITC--EAETNLLWMEVAGYPHA--YTLRLILHSGRRSEAYWSESVVPDLWQAVQSLQV 120          
BLAST of Ggra6737.t1 vs. uniprot
Match: DUF1818 family protein n=1 Tax=Sphaerospermopsis aphanizomenoides TaxID=459663 RepID=UPI000A620B2C (DUF1818 family protein n=1 Tax=Sphaerospermopsis aphanizomenoides TaxID=459663 RepID=UPI000A620B2C)

HSP 1 Score: 65.1 bits (157), Expect = 1.710e-9
Identity = 47/142 (33.10%), Postives = 69/142 (48.59%), Query Frame = 0
Query:  193 IQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWAQALGQPASGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLGI 334
            I+SG G+R+G++P+APK F  +VG D W + L+  E+  F RL   L   M  +                + + M   ++A        E ES L+W +A G P S  Y +R I   GR +E  W ++TVP LL A   L +
Sbjct:    5 IKSGTGWRIGWNPDAPK-FKGLVGTDNWAIELTELELDDFCRLLNQLADTMKHL----------------ATELMDEEKIA-------CEAESDLLWMEAEGYPHS--YSLRFILNTGRCAEGEWNADTVPGLLQAAATLKV 120          
BLAST of Ggra6737.t1 vs. uniprot
Match: DUF1818 family protein n=1 Tax=Nostoc sp. TCL26-01 TaxID=2576904 RepID=UPI0015BC616A (DUF1818 family protein n=1 Tax=Nostoc sp. TCL26-01 TaxID=2576904 RepID=UPI0015BC616A)

HSP 1 Score: 65.1 bits (157), Expect = 1.710e-9
Identity = 44/142 (30.99%), Postives = 68/142 (47.89%), Query Frame = 0
Query:  193 IQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWAQALGQPASGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLGI 334
            I+SG G+R+G++P APK F  +VG D W + L+  E+  F RL   L   M ++                + + M   ++A        E ES L+W +  G P   +Y +R I   GR +E  W++  VP+LL A   L +
Sbjct:    5 IKSGAGWRIGWNPNAPK-FKGLVGTDDWAIELTEAELDDFCRLLAKLANTMQQL----------------TSELMDEEKIA-------CEAESDLLWMEVAGYPH--EYNLRFILNTGRGAEGAWSAAAVPSLLQAAETLKV 120          
BLAST of Ggra6737.t1 vs. uniprot
Match: K9VEA9 (Uncharacterized protein n=5 Tax=Cyanobacteria TaxID=1117 RepID=K9VEA9_9CYAN)

HSP 1 Score: 61.2 bits (147), Expect = 4.120e-8
Identity = 42/142 (29.58%), Postives = 68/142 (47.89%), Query Frame = 0
Query:  193 IQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWAQALGQPASGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLGI 334
            I++GVG+R+G++PEA + F  +V  D W + L+  E+  F RL   L   M +I                + + M   ++A       +E ES L+W Q  G P +  Y ++ I   GR+ E FW +  VP+L+     L +
Sbjct:    6 IKTGVGWRLGWNPEA-QEFQGLVAGDGWAIELTEAELNDFCRLLGQLAGTMSQI----------------ASELMDEEKIA-------IEAESDLLWVQVEGYPEA--YSVQLILNAGRRCEGFWPAAAVPSLVQTAKVLKV 121          
BLAST of Ggra6737.t1 vs. uniprot
Match: A0A1Q4S4E5 (Uncharacterized protein n=5 Tax=Nostocales TaxID=1161 RepID=A0A1Q4S4E5_9CYAN)

HSP 1 Score: 60.8 bits (146), Expect = 5.510e-8
Identity = 45/142 (31.69%), Postives = 67/142 (47.18%), Query Frame = 0
Query:  193 IQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWAQALGQPASGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLGI 334
            I+SGVG+R+G++P APK F  +VG   W V L+  E+  F RL   L   M ++           P +      M + ++A       +E ES L+W +  G   S  Y +R I    R  E  W ++ VP LL A + L +
Sbjct:    5 IKSGVGWRIGWNPSAPK-FKGLVGTSDWSVELTQTELDDFCRLLTQLADTMKQLA----------PEL------MDSEKIA-------IEAESDLIWMEVEGYHHS--YSLRFIINNERACEGKWETDAVPGLLQAASTLKV 120          
The following BLAST results are available for this feature:
BLAST of Ggra6737.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3IGM09.390e-16170.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8595.990e-13473.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NI035.090e-6352.13Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J7IJL21.500e-2836.62Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1V5V21.500e-2636.74Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A2T1C6P52.660e-1028.87DUF1818 domain-containing protein n=1 Tax=Merismop... [more]
DUF1818 family protein n=1 Tax=Sphaerospermopsis aphanizomenoides TaxID=459663 RepID=UPI000A620B2C1.710e-933.10DUF1818 family protein n=1 Tax=Sphaerospermopsis a... [more]
DUF1818 family protein n=1 Tax=Nostoc sp. TCL26-01 TaxID=2576904 RepID=UPI0015BC616A1.710e-930.99DUF1818 family protein n=1 Tax=Nostoc sp. TCL26-01... [more]
K9VEA94.120e-829.58Uncharacterized protein n=5 Tax=Cyanobacteria TaxI... [more]
A0A1Q4S4E55.510e-831.69Uncharacterized protein n=5 Tax=Nostocales TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014947Protein of unknown function DUF1818PFAMPF08848DUF1818coord: 195..246
e-value: 4.1E-7
score: 30.1
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10Transcriptional Coactivator Pc4; Chain Acoord: 189..334
e-value: 2.0E-24
score: 87.8
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 192..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:323529..324536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6737.t1Ggra6737.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 323529..324536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6737.t1 ID=Ggra6737.t1|Name=Ggra6737.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=336bp
MVNAFLAPAPVASRARRLTPAVCPRAARGAPVRWSCCASPLDPVEAAVAD
GETLRQQLAAVSDSRRKQAERTNEALMNMAAQISAITAKLRADAGMPPVA
DPPPPSAAVDRAVATPSVVSEDDASSAADEPYMDPKNFGYESTAGWQVLE
ASEHLPENERDLQFRIECDMHGCSLIEVKRDAPPGPGVRHNFIQSGVGFR
VGFDPEAPKSFCAMVGNDQWLVALSYDEIRHFKRLCLSLQKRMDRIGRGE
EDPPVKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWAQALGQPASGK
YCIRAIFMEGRQSECFWASETVPNLLAALNKLGIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014947DUF1818
IPR009044ssDNA-bd_transcriptional_reg