Ggra6734.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6734.t1
Unique NameGgra6734.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length283
Homology
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A2V3IGN6 (Zinc transporter 6, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGN6_9FLOR)

HSP 1 Score: 338 bits (867), Expect = 6.200e-114
Identity = 180/282 (63.83%), Postives = 231/282 (81.91%), Query Frame = 0
Query:    1 MDAVSCRTATLTILSVFLLALSGSLAPLLLASPAYHVRVLRLGNAFSAGFLVAAALVHILPSAMIALSQNVSTDYPLGGLLTLVGVCSVFMLDVLARRIQSSGKALPMHSHTAFSRAHSPTVAVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVYMCIFFASVTPLGALSGIALLGIFPDRIAILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAGAMSLLALWT 282
            M AV+  TA+LT+L VFLLAL GSLAP++  +PA H R+LR+GNAF+AGFL++AALVH+LPSA++ALS+ +ST YPLGGLL L+G CSV++LDV+ARRI++  K +P+H+H   +  HSP VA+VLA SLSFHS +EGVS+GVS LD +SF ALSIAI+ HKLFAA+ALGSALT + DGD  LQK++VYMC+ FA+VTP+GA+ G+ALL +    +  +L+ A+N+LS+GVFLYVA VELLAD+FRY SL  Y++L+PDDSL   AVFV AAG MSLLALWT
Sbjct:    1 MHAVNISTASLTVLCVFLLALFGSLAPVIYVTPACHARILRVGNAFAAGFLLSAALVHLLPSAIVALSKQLSTTYPLGGLLCLLGACSVYVLDVVARRIETCHKLIPVHAHNGHTHLHSPAVALVLAVSLSFHSLVEGVSLGVSLLDTTSFTALSIAILAHKLFAAVALGSALTVTADGDPVLQKRSVYMCVLFAAVTPVGAMGGVALLDVLSTSVYSVLLPAVNVLSSGVFLYVALVELLADQFRYVSLQDYSNLDPDDSLLCTAVFVAAAGVMSLLALWT 282          
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A446KQ30 (Uncharacterized protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446KQ30_TRITD)

HSP 1 Score: 88.6 bits (218), Expect = 9.640e-17
Identity = 79/261 (30.27%), Postives = 125/261 (47.89%), Query Frame = 0
Query:   36 HVRVLR-------LGNAFSAGFLVAAALVHILPSAMIALSQNVST------DYPLGGLLTLVGVCSVFMLDVLARRIQSSGKALPMHSHTAFSRAHSPTVAVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVYMCIFFASVTPLGALSGIALLGIFPDR--IAILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAGAMSLLALW 281
            HV  LR       L  AF+AG ++A   +HILP A   L+ +         D+P  GL  +VG     ++D LA    +        +H    RAH  + AVVL   +  HS + G+S+G S  D  + K L +A+  H++F  + LG  +   V    K  +  V M +FF   TP+G   G  +  ++ +    A+++  +LN ++AG  +Y+A V+LLA++F    + S   L     L      ++ AG MS+LA W
Sbjct:   67 HVPALRPDGDVFFLVKAFAAGVILATGFIHILPDAFENLTSDCLPAAGPWKDFPFAGLGAMVGAIGTLVVDTLATGYFT-------RAHLNKDRAHGSSAAVVLELGIVVHSVIIGISLGASQ-DPETIKPLVVALSFHQMFEGMGLGGCI---VQAKFK-ARSIVTMILFFCLTTPVGIAIGFGISRVYNENSPTALVVEGSLNSVAAGTLVYMALVDLLAEDFMNPKVQSRGKLQ----LGINVSMLVGAGLMSMLAKW 311          
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A7C7YAV8 (ZIP family metal transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7YAV8_9DELT)

HSP 1 Score: 85.9 bits (211), Expect = 4.670e-16
Identity = 88/275 (32.00%), Postives = 124/275 (45.09%), Query Frame = 0
Query:   13 ILSVFLLALSGSLAPLLLASPAYHVRVLRLGNAFSAGFLVAAALVHILPSAMIALSQNVSTDYPLGGLLTLVGVCSVFMLDV----LARRIQSSGKALPMHSHTAFSRAHSPTV-AVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVYMCIFFASVTPLGALSGIALLGIFPDRIAILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAGAMSLLALWT 282
            +L++     +G+  PLL        R+L  GN+F+AG  +AA LVH+LP A   +   +  DYP+     L G    FML V    L  +      A         +  H  T+ A  +  +LS HS L G+++G    D S    +S+AI+ HK  A  ALG +L  S    S    Q+  +   FA+ TP+G L G  +      RIA    +A   ++AG F+YVAT ++L DEF            P        V      AM LLALWT
Sbjct:    9 LLAILAAGAAGAALPLLRRKSTQSDRILGWGNSFAAGVFLAAGLVHMLPDAD-EVWTGLGWDYPMA--FVLAGFAFAFMLLVEHVLLPEQAHQEVHAPSGERFARIAEQHHDTLSAYAVLTALSIHSLLAGLALGAQP-DLSRALIISLAIVAHKSAAGFALGISLARSPLPTS----QSWRLVGLFAAATPIGGLVGALVGEALEGRIASSFEAAFLSIAAGTFVYVATFDILRDEFPA----------PGGRFAKWLVLTSGIAAMGLLALWT 265          
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A6A1VXT4 (Zinc transporter 1 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VXT4_9ROSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.810e-14
Identity = 77/280 (27.50%), Postives = 127/280 (45.36%), Query Frame = 0
Query:   44 NAFSAGFLVAAALVHILPSAM-----IALSQNVSTDYPLGGLLTLVGVCSVFMLDVLAR---------------RIQSSGKALPMHSHT------AFSRAHSPT-------------VAVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQ-KQAVYMCIFFASVTPLGALSGIALLGIFPDR--IAILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAGAMSLLALW 281
             AF+AG ++A   +HILP +        L+QN   ++P  G   ++      M+D  A                 ++ +G A  +H HT      A   A+ PT             +A VL   + FHS + G+ +GVS     + + L +A+  H+ F  + LG  ++      +K + K A  M IFF+  TP+GA  GI +   + +   +A+++    N L+AG+ +Y+A V+LLA++F    ++     N    L      +L AG MSLL  W
Sbjct:   91 KAFAAGVILATGFIHILPDSFENLTSACLNQNPWGNFPFAGFFAMLSAIGTLMIDAYATGYYTSLPFDTQANADEVRDNGPAGHLHVHTHATHGXAHGSANIPTERMNLPELTRHRIIAQVLEIGIVFHSVIIGIDMGVSQ-SVGTIRPLLVALSFHQFFEGIGLGGCIS-----QAKFKTKSAAIMAIFFSLTTPVGAAIGIGISSSYNENSPLALIVEGTFNGLAAGILIYMALVDLLAEDF----MNPRVQTNLKIQLWVNVSLLLGAGCMSLLGRW 360          
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A067LLY5 (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LLY5_JATCU)

HSP 1 Score: 81.3 bits (199), Expect = 5.350e-14
Identity = 90/338 (26.63%), Postives = 159/338 (47.04%), Query Frame = 0
Query:    3 AVSCRTAT-------LTILSVFLLALSGSLAPLLLA-----SPAYHVRVLRLGNAFSAGFLVAAALVHILPSAMIALSQ-NVST-----DYPLGGLLTLVGVCSVFMLDVLARRIQSSGKALPMHSHTAFSRAHSPT-----------------------------------VAVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVYMCIFFASVTPLGALSGIALLGI--FPDRI--AILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAG--AMSLLALW 281
            A+SCR +T       ++IL +F  ++ G  +P+LLA      P Y  R + +   F+AG +++ +LVH+LP A  ALS  +V++     D+P+ GL+TL+G     ++D+ A     + +          S+ ++P                                    V+ VL   + FHS + GV++G+S  +  + + L  A+  H++F  + LG  +  +  G S       YMC  F+  TP+G + G+ +  +  + D    A+++   L  LS+G+ +Y+  V+L+A +F +  L     +N   SL  ++   L  G  AMS+LALW
Sbjct:   14 ALSCRNSTAASHLKLISILIIFFTSVIGISSPVLLARYFHGKPLYD-RAILVIKCFAAGVILSTSLVHVLPDAYAALSDCHVASKHPWKDFPVAGLVTLIGALIALLVDITASAHVENSQGXXXXXXXXXSKNYTPVGTQEEIGGKKAGELSKLELGEREEEESLVKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQ-NQCTIRPLVAALAFHQIFEGMGLGGCIAQA--GFS--LGTVGYMCFMFSVTTPMGIVLGMIIFSLTGYDDSNPNALIMEGLLGSLSSGILIYMGLVDLIALDFFHNKL-----MNSAPSLKKISFIALILGSTAMSILALW 340          
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A2D6MY76 (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6MY76_9DELT)

HSP 1 Score: 79.7 bits (195), Expect = 1.180e-13
Identity = 87/287 (30.31%), Postives = 128/287 (44.60%), Query Frame = 0
Query:   13 ILSVFLLALSGSLAPLLLASPAYHVRVLRLGNAFSAGFLVAAALVHILPSAMIALSQNVSTDYPLGGLLTLVGVCSVFMLDVLARRIQSSGKALPMHSHTAFSRAHSPT-----------------VAVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVYMCIFFASVTPLGALSGIALLGIFPDRIAILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAGAMSLLALWT 282
            +L++     +G+  PLL    A   R+L  GNAF+AG  +A  LVH+LP A   +   +  DYP+     L G   VFML V           LP  +H      H+P+                  AV++A  LS H+ L G+++G    + +    +S+AII HK  A+LALG +L  S    +    Q+  +   FA  TP+G L G  +       +   L ++   ++ G F+YVAT ++L DEF            P   +    V  L    MS LALWT
Sbjct:   39 LLAILAAGAAGAALPLLRRGTAQDDRILGWGNAFAAGIFLATGLVHMLPDAD-RMWSGLGWDYPMA--FVLAGFAFVFMLLV-------EHVVLPEQAH---QEVHAPSGERFAHAAEHHQDALSAYAVLIA--LSIHALLAGLALGAEP-ELARALVISLAIIAHKSAASLALGVSLARSHLPPA----QSWRLVALFALATPIGGLIGAVVGEAVEGPLGETLEASFLSIAGGTFVYVATFDILRDEFPA----------PGGRVAKWIVLTLGVATMSTLALWT 295          
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A8J5GWY4 (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GWY4_ZINOF)

HSP 1 Score: 78.2 bits (191), Expect = 6.290e-13
Identity = 77/268 (28.73%), Postives = 123/268 (45.90%), Query Frame = 0
Query:   44 NAFSAGFLVAAALVHILPSAMIALSQNVST-----DYPLGGLLTLVGVCSVFMLDVLA-----RRIQSSGKALPMHSHTAFSRAHSPT-----------------VAVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVY-MCIFFASVTPLGALSGIALLGIFPDR--IAILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAGAMSLLALW 281
             AF+AG ++A   +HILP A  +L+          D+P  G   +V       +D +A     RR  + G+A           AH  T                 ++ VL   +  HS + G+S+G S   A+  + L  ++  H+LF  + LG  +       +KL+ +++  M +FFA  TP G   G+A+   + +    A+++   LN  SAG+ +Y+A V+LLA +F  A + S     P   L S +  +L AG MSLLA W
Sbjct:   80 KAFAAGVILATGFIHILPDAFGSLTSPCLAPSPWQDFPFAGFGAMVAAIGSLAVDAIATGFLGRRAAAVGEAGTSEEDDVEVHAHGNTHGRVPQGAEAQLIRDRVISQVLELGIVMHSVIIGISLGASESPAT-IRPLMTSLSFHQLFEGIGLGGCIA-----QAKLKARSMLKMGLFFALTTPAGIAFGMAISSAYKESSPTALIVEGVLNSASAGILIYMALVDLLAQDFMNARVQS----RPMLQLLSTSALLLGAGLMSLLAKW 337          
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A7C3HHG5 (ZIP family metal transporter n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C3HHG5_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 9.940e-13
Identity = 77/233 (33.05%), Postives = 120/233 (51.50%), Query Frame = 0
Query:   16 VFLLALSGSLAPLLLASPAYHVR--VLRLGNAFSAGFLVAAALVHILPSAMIALSQNVSTDYPLGGLLTLVGVCSVFMLDVLARRIQSSGKALPMHSHTAFSRAHSPTVAVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVYMCIFFASVTPLGALSGIALLGIFPDRIAILLMSALNLLSAGVFLYVATVELLADEFR 246
            +F++A  G L P+L     +H R  VLRL  +F AG L+AAA +H+LP A       ++ ++   GL  L G   +++ +               H H  +S            A L+FHSF++GV+IG SSL       ++IAI+ HK  A++AL S L  S  G S+++ +  +  I F  + P+GA    A+LG FPD +    + AL   SAG F+++AT +L+ +  R
Sbjct:   13 IFVVAAVGGLVPML-----WHEREEVLRLFVSFGAGVLLAAAFLHMLPEA-----SELAGNWL--GLSVLTGFVVMYVTEKFVMTHPCEADHCDYH-HVGWSSF----------AGLTFHSFVDGVAIGSSSLVPQIGPVVAIAILFHKFPASMALSSVLLRS--GFSRVRAE--FAVIVFGLMVPIGAFVTHAVLGGFPDEV----LGALIAFSAGTFIHIATDDLMPEIHR 214          
BLAST of Ggra6734.t1 vs. uniprot
Match: A0A350QN39 (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A350QN39_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 2.180e-12
Identity = 84/265 (31.70%), Postives = 128/265 (48.30%), Query Frame = 0
Query:   23 GSLAPLLLASPAYHVRVLRLGNAFSAGFLVAAALVHILPSAMIAL-SQNVSTDYPLGGLLTLVGVCSVFMLDVLARRIQSSG--KALPMHSHTAFSRAHSPTVAVVLAASLSFHSFLEGVSIGVSSLDASSFKALSIAIIVHKLFAALALGSALT-ASVDGDSKLQKQAVYMCIFFASVTPLGALSGIALLGIFP--DRIAILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAGAMSLLALW 281
            G +AP L A      R +  GN+F+ G L+AA L+H+LP A     S   S DYP    +  +    V  L+ +  R  +SG  +  P       S  H      +L  +LS HS + GV++G+S+  A+    L +AI+ HK  A  ALGS    A++   +++    V     F   TPLG + G A + IF   D  A+    A+   +AG FLY+AT++++ +EF     +    L     L +M+     AG M+L+ALW
Sbjct:   30 GVIAPWLAARGGRE-RAIAYGNSFAGGVLLAAGLIHLLPDANEGFKSAYPSVDYPAAFAVATLAFILVLGLERVVPRAMASGLGEGDPESEALVGSGVHGGFAPYLLLMTLSIHSLIAGVTLGIST--AAGASVLLMAILAHKGAAGFALGSTFREAAIPPRTRIPALLV-----FVGSTPLGVILGGAAIDIFGSGDGAAVAWFKAV---AAGTFLYIATLDIVREEFFPGGTNRGRRL-----LWAMS----GAGIMALVALW 274          
BLAST of Ggra6734.t1 vs. uniprot
Match: zinc transporter 3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FDDA6 (zinc transporter 3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FDDA6)

HSP 1 Score: 76.6 bits (187), Expect = 2.480e-12
Identity = 73/261 (27.97%), Postives = 120/261 (45.98%), Query Frame = 0
Query:   44 NAFSAGFLVAAALVHILPSAMIALSQ------NVSTDYPLGGLLTLVGVCSVFMLDVLARRIQSSG--KALPMHSHTAFSRAHSP------------TVAVVLAASLSFHSFLEGVSIGVS-SLDASSFKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVYMCIFFASVTPLGALSGIALLGIFPDR--IAILLMSALNLLSAGVFLYVATVELLADEFRYASLHSYTDLNPDDSLPSMAVFVLAAGAMSLLALW 281
             AF+AG ++  A +HILP A   L+       +    +P  GL  ++G     ++D LA R    G  +A  +H H   S +H P              + VL   ++ HS + G+++G + SLD    K L IA+  H+ F  + LG  L   V    K     ++M +FF+  TP+G   GIA+   +       +++   ++  +AG+ +Y+A V+LLA +F  A L      N      +     L  G M++LA+W
Sbjct:  106 KAFAAGVILCTAFIHILPEAFENLTNPCLGENSTIGSFPFTGLFAMLGALVTLLMDSLATRHFRKGDDEAKDVHHHVHGSGSHVPEGLDKVDLIRYRVTSQVLEMGIAVHSVIIGITVGTAESLDV--IKPLMIALCFHQFFEGVGLGGCL---VQAAFK-SVSTLFMALFFSITTPVGIAIGIAIANTYDGTSPTGLIVRGVMDSFAAGILIYMALVDLLAQDFMNAKLQK----NGRIFFGANITLCLGVGFMAVLAMW 356          
The following BLAST results are available for this feature:
BLAST of Ggra6734.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGN66.200e-11463.83Zinc transporter 6, chloroplastic n=1 Tax=Gracilar... [more]
A0A446KQ309.640e-1730.27Uncharacterized protein n=2 Tax=Triticum turgidum ... [more]
A0A7C7YAV84.670e-1632.00ZIP family metal transporter n=1 Tax=Myxococcales ... [more]
A0A6A1VXT41.810e-1427.50Zinc transporter 1 n=1 Tax=Morella rubra TaxID=262... [more]
A0A067LLY55.350e-1426.63Uncharacterized protein n=1 Tax=Jatropha curcas Ta... [more]
A0A2D6MY761.180e-1330.31Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A8J5GWY46.290e-1328.73Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
A0A7C3HHG59.940e-1333.05ZIP family metal transporter n=1 Tax=Bacteroidetes... [more]
A0A350QN392.180e-1231.70Uncharacterized protein n=2 Tax=Phycisphaerae TaxI... [more]
zinc transporter 3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FDDA62.480e-1227.97zinc transporter 3 n=1 Tax=Beta vulgaris subsp. vu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003689Zinc/iron permeasePFAMPF02535Zipcoord: 109..278
e-value: 4.5E-27
score: 95.1
NoneNo IPR availablePANTHERPTHR11040ZINC/IRON TRANSPORTERcoord: 11..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 218..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 282..282
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 242..261
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 262..281
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 216..238
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 155..177
NoneNo IPR availableTMHMMTMhelixcoord: 187..209
NoneNo IPR availableTMHMMTMhelixcoord: 77..96
NoneNo IPR availableTMHMMTMhelixcoord: 262..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:319511..320359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6734.t1Ggra6734.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 319511..320359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6734.t1 ID=Ggra6734.t1|Name=Ggra6734.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=283bp
MDAVSCRTATLTILSVFLLALSGSLAPLLLASPAYHVRVLRLGNAFSAGF
LVAAALVHILPSAMIALSQNVSTDYPLGGLLTLVGVCSVFMLDVLARRIQ
SSGKALPMHSHTAFSRAHSPTVAVVLAASLSFHSFLEGVSIGVSSLDASS
FKALSIAIIVHKLFAALALGSALTASVDGDSKLQKQAVYMCIFFASVTPL
GALSGIALLGIFPDRIAILLMSALNLLSAGVFLYVATVELLADEFRYASL
HSYTDLNPDDSLPSMAVFVLAAGAMSLLALWT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003689ZIP