Ggra6718.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6718.t1
Unique NameGgra6718.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length220
Homology
BLAST of Ggra6718.t1 vs. uniprot
Match: A0A2V3IJW9 (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW9_9FLOR)

HSP 1 Score: 333 bits (854), Expect = 6.200e-114
Identity = 174/219 (79.45%), Postives = 187/219 (85.39%), Query Frame = 0
Query:    1 MLLTVSRRARNVQNLSSIRLLCSSAGLDEEKPGHSPAKSQSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLKWDDEGALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            ML+ V RRAR V   S++R LC++     E    S +  QSPFL DP KKK+ID MLRVDHAGEIGARQIYAGQLAVFRNTPVG+VI EMAEQE+KHL+AFD LIK RRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYN+QVRALLK D E  LR +FREFRDDELEHKDTGI+YDAEKAPFYRALSD IQAGCRAAI ITERV
Sbjct:    4 MLVGVPRRARKVATRSTLRCLCTTTA-PHENSDESRSGPQSPFLADPNKKKLIDTMLRVDHAGEIGARQIYAGQLAVFRNTPVGNVIHEMAEQEKKHLNAFDALIKERRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNEQVRALLKDDTERQLRALFREFRDDELEHKDTGIEYDAEKAPFYRALSDVIQAGCRAAIAITERV 221          
BLAST of Ggra6718.t1 vs. uniprot
Match: A0A7S0BT74 (5-demethoxyubiquinone hydroxylase, mitochondrial n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BT74_9RHOD)

HSP 1 Score: 256 bits (653), Expect = 2.260e-83
Identity = 125/184 (67.93%), Postives = 152/184 (82.61%), Query Frame = 0
Query:   38 KSQSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLK--WDDEGALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            K  SP   D   K ++D+M+RVDHAGE+GARQIYAGQLA+FR T +  VI+EMAEQE+KHL+AF++LI  RRVRPTAMLP+W VAGYALG G+AL+GKEAAMACTVAVEEVIAEHYNDQ+R L +  ++ E  LR+M +EFRDDELEHKD GI++DAE AP Y+A+S  I+AGC AAI I+ERV
Sbjct:   37 KQNSPLFADKESKAVLDKMIRVDHAGELGARQIYAGQLAIFRGTSLQPVIEEMAEQEKKHLNAFNRLISERRVRPTAMLPVWRVAGYALGFGSALVGKEAAMACTVAVEEVIAEHYNDQIRQLHETGFEKEQPLREMIKEFRDDELEHKDIGIEFDAEMAPMYKAISQVIKAGCHAAIYISERV 220          
BLAST of Ggra6718.t1 vs. uniprot
Match: A0A7S1TNN0 (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNN0_9RHOD)

HSP 1 Score: 238 bits (607), Expect = 2.580e-75
Identity = 120/201 (59.70%), Postives = 158/201 (78.61%), Query Frame = 0
Query:   23 SSAGLDEEKPGHSPAKSQSP--FLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALL--KWDDEGALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            + AG  EE  G     S+     +++  ++ I+ RMLRV+HAGE+GARQIYAGQLAV R T  G VI+EMA QE+KHLD F+KL+  RRVRPTA+LP+WN+AG+ALG+GTALLG +AAMACTVAVE+VI+ HYN+QVR LL  +++ E +LRD FR+FRD+ELEH  TG++++AE+AP Y ALS+ I+ GC+AAI I+ERV
Sbjct:   97 ADAGEREELAGGGQGDSEHAEVAMSESERRAIVHRMLRVNHAGELGARQIYAGQLAVLRGTATGPVIEEMALQEKKHLDEFEKLLCERRVRPTALLPLWNIAGFALGMGTALLGTKAAMACTVAVEDVISRHYNEQVRELLAPEFESEKSLRDTFRQFRDEELEHMHTGVEHEAEQAPMYHALSEVIKTGCKAAIYISERV 297          
BLAST of Ggra6718.t1 vs. uniprot
Match: A0A5J4YUZ8 (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUZ8_PORPP)

HSP 1 Score: 236 bits (602), Expect = 3.130e-75
Identity = 114/189 (60.32%), Postives = 150/189 (79.37%), Query Frame = 0
Query:   33 GHSPAKSQSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLK--WDDEGALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            G SP  + S  L    ++K+I+RMLRV+HAGE+GARQIYAGQLAV  N+ VG +I+EMA+ E +HL  F+KL+  RRVRPT MLP+WN+AG+ALG G+AL+GKEAAMACTVAVE+VI++HYNDQVR LL+  W+ E  LR+  R+FRDDE++H D GI++DA+KAP Y  +S+ I+ GC AAI ++ERV
Sbjct:   60 GASPRAASSEQLAKEEQRKVIERMLRVNHAGELGARQIYAGQLAVLGNSSVGGMIREMAQHELEHLQEFEKLVVERRVRPTVMLPLWNIAGFALGFGSALMGKEAAMACTVAVEDVISKHYNDQVRELLQPGWEHEQPLREKLRKFRDDEMDHHDIGIEHDAQKAPAYDFISNIIKQGCHAAIFVSERV 248          
BLAST of Ggra6718.t1 vs. uniprot
Match: A0A0B6ZDP2 (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZDP2_9EUPU)

HSP 1 Score: 223 bits (568), Expect = 8.580e-71
Identity = 110/190 (57.89%), Postives = 143/190 (75.26%), Query Frame = 0
Query:   32 PGHSPAKSQSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLKWDDEG--ALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            P     +  S  L D R + ++DR++RVDHAGE GA +IYAGQLAV RN+ VG +IKEM E+E+ H + F+KL+   RVRPT +LP WN+AG+ALG GTALLGKEAAMACTVAVE+VI +HYN Q+R L++ D E    L ++ ++FRDDEL H DTG++YDAEKAPFY AL+  I+ GCR AI ++ER+
Sbjct:    8 PAFVVRRGLSTTLKDSRTQALLDRVIRVDHAGEFGADRIYAGQLAVLRNSSVGPLIKEMWEEEKYHRETFEKLMVENRVRPTVLLPFWNIAGFALGAGTALLGKEAAMACTVAVEDVIGDHYNSQLRQLVEDDPEKHKELLEIVKKFRDDELHHHDTGLKYDAEKAPFYSALTQVIKVGCRGAIWLSERI 197          
BLAST of Ggra6718.t1 vs. uniprot
Match: K1QQZ7 (5-demethoxyubiquinone hydroxylase, mitochondrial n=2 Tax=Crassostrea TaxID=6564 RepID=K1QQZ7_CRAGI)

HSP 1 Score: 219 bits (557), Expect = 3.750e-69
Identity = 107/176 (60.80%), Postives = 137/176 (77.84%), Query Frame = 0
Query:   46 DPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLKWDDEG--ALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            D + +K++ R++RVD AGE+GA +IYAGQ+AV  NTPVG +I+EM EQEQ+HL+ F+KLI  +RVRPTA+LP+WN+AG+ALG GTALLGKE AMACTVAVE VI EHYN Q+R L++ D E    L     +FRDDEL H DTG+++DAEKAP Y ALS  I+ GC  AI ++ER+
Sbjct:   20 DEKTRKLLSRIIRVDQAGELGADRIYAGQIAVLGNTPVGPIIQEMKEQEQEHLETFNKLIVEKRVRPTALLPLWNIAGFALGAGTALLGKEGAMACTVAVESVIGEHYNSQIRDLMEDDPEKHKELIKKLSKFRDDELHHHDTGLEHDAEKAPMYDALSQVIKVGCIGAIWLSERI 195          
BLAST of Ggra6718.t1 vs. uniprot
Match: 5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035978DA (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035978DA)

HSP 1 Score: 219 bits (557), Expect = 4.420e-69
Identity = 107/188 (56.91%), Postives = 143/188 (76.06%), Query Frame = 0
Query:   34 HSPAKSQSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLKWDDEG--ALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            H   +  S  + D R + +ID+++RVDHAGE+GA +IYAGQ AV   TPVG +IKEM E+E+ H   FD+L+  RRVRPTA+LP+WNVAG+ LG  TA+LGKEAAMACTVAVE+VI +HYN Q+R L++ D E    L ++ ++FRDDEL H DTG+++DAEKAPFY AL++ I+ GCR AI I+E++
Sbjct:   13 HICKRFASTAVKDARTRALIDKIIRVDHAGELGADRIYAGQHAVLGKTPVGPLIKEMWEEEKYHKATFDRLMAERRVRPTALLPLWNVAGFVLGASTAMLGKEAAMACTVAVEDVIGDHYNSQIRELMEDDPEKHKELLEIVKKFRDDELHHHDTGLEHDAEKAPFYSALTEVIKVGCRGAIWISEKI 200          
BLAST of Ggra6718.t1 vs. uniprot
Match: A0A6J8ECS2 (5-demethoxyubiquinone hydroxylase, mitochondrial n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8ECS2_MYTCO)

HSP 1 Score: 217 bits (553), Expect = 1.520e-68
Identity = 106/186 (56.99%), Postives = 139/186 (74.73%), Query Frame = 0
Query:   36 PAKSQSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLKWDDEG--ALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            P +  S      R ++++D+++RVDHAGE+GA +IY GQLAV  NT VG VIKEM E E+ HL+ F+KLI   R RPT +LPIWNVAG+ALG G+ALLGKE AMACTVAVE VI +HYN Q+R L++ D E    L  + ++FRDDEL H DTG+++DAEKAPFY+AL+  I+ GC+ AI I+E++
Sbjct:   10 PCRHMSQMARQKRSRELVDKIIRVDHAGELGADRIYQGQLAVLGNTSVGPVIKEMWEDEKIHLETFNKLIVQHRARPTVLLPIWNVAGFALGAGSALLGKEGAMACTVAVEAVIGDHYNSQIRDLMEDDPEKHEELLKIIKKFRDDELHHHDTGLEHDAEKAPFYQALTQVIKIGCKGAIWISEKI 195          
BLAST of Ggra6718.t1 vs. uniprot
Match: 5-demethoxyubiquinone hydroxylase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE160 (5-demethoxyubiquinone hydroxylase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE160)

HSP 1 Score: 218 bits (554), Expect = 1.530e-68
Identity = 101/176 (57.39%), Postives = 138/176 (78.41%), Query Frame = 0
Query:   46 DPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLKWDDEG--ALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            D + K ++D+++R+DHAGE GA++IY GQLAV  +TP G +I+EM E+E+KHL  F+KL+++ R RPT +LP+WN+AG+ALG G+ALLGKE AMACTVAVE VI +HYNDQ+R L++ D E    L    +EFRDDEL H DTG+++DAEKAPFY  LS+ I+ GC+ AI I+E++
Sbjct:   31 DEQTKALLDKIIRIDHAGEFGAKRIYQGQLAVLADTPTGPLIQEMQEEEEKHLAEFEKLMRDHRARPTVLLPLWNIAGFALGAGSALLGKEGAMACTVAVESVIGQHYNDQIRELMEDDPEKHRELLKTLKEFRDDELHHHDTGLEHDAEKAPFYNVLSEAIKIGCKGAIWISEKI 206          
BLAST of Ggra6718.t1 vs. uniprot
Match: A0A7M7NQH7 (5-demethoxyubiquinone hydroxylase, mitochondrial n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7NQH7_STRPU)

HSP 1 Score: 218 bits (554), Expect = 1.860e-68
Identity = 117/217 (53.92%), Postives = 156/217 (71.89%), Query Frame = 0
Query:   12 VQNLSSIRL-------LCSSAGLDEEKPGHSPAKSQSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALLKWDDE--GALRDMFREFRDDELEHKDTGIQYDAEKAPFYRALSDFIQAGCRAAITITERV 219
            +QNL+SIR        L  S  + E K G   A S S       ++++IDR +RVDHAGE+GA +IYAGQLAV +NT VG +I+EM +QE+ H + F++LI  RRVRPT +LPIWNVAGY LG GTAL+GKEAAMACTVAVEE I +HYNDQ+RAL++ D E    L ++ ++FRD+ELEH +TG++ DA+KAP Y  +   I+ GC+AAI ++ER+
Sbjct:    1 MQNLTSIRYCVLRQYKLRMSRAIVEVK-GQRSASSLSGLT----RREMIDRFIRVDHAGEVGADRIYAGQLAVLKNTSVGPLIQEMWDQEKHHKETFERLIPERRVRPTVLLPIWNVAGYVLGAGTALMGKEAAMACTVAVEESIGQHYNDQIRALIEDDPEVHKELLEIIKQFRDEELEHLNTGLENDAKKAPMYSTMDMVIKGGCKAAIWLSERI 212          
The following BLAST results are available for this feature:
BLAST of Ggra6718.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJW96.200e-11479.455-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A7S0BT742.260e-8367.935-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A7S1TNN02.580e-7559.705-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A5J4YUZ83.130e-7560.325-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A0B6ZDP28.580e-7157.895-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
K1QQZ73.750e-6960.805-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035978DA4.420e-6956.915-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A6J8ECS21.520e-6856.995-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
5-demethoxyubiquinone hydroxylase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE1601.530e-6857.395-demethoxyubiquinone hydroxylase, mitochondrial-l... [more]
A0A7M7NQH71.860e-6853.925-demethoxyubiquinone hydroxylase, mitochondrial n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012347Ferritin-likeGENE3D1.20.1260.10coord: 45..193
e-value: 5.2E-10
score: 41.0
IPR011566Ubiquinone biosynthesis protein Coq7PFAMPF03232COQ7coord: 53..219
e-value: 1.2E-69
score: 233.5
IPR011566Ubiquinone biosynthesis protein Coq7PANTHERPTHR11237COENZYME Q10 BIOSYNTHESIS PROTEIN 7coord: 12..219
IPR011566Ubiquinone biosynthesis protein Coq7HAMAPMF_01658COQ7coord: 2..219
score: 30.819534
IPR011566Ubiquinone biosynthesis protein Coq7CDDcd01042DMQHcoord: 53..218
e-value: 2.44101E-82
score: 240.507
IPR009078Ferritin-like superfamilySUPERFAMILY47240Ferritin-likecoord: 55..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:282455..283114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6718.t1Ggra6718.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 282455..283114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6718.t1 ID=Ggra6718.t1|Name=Ggra6718.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=220bp
MLLTVSRRARNVQNLSSIRLLCSSAGLDEEKPGHSPAKSQSPFLTDPRKK
KIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGHVIKEMAEQEQKHLDA
FDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIA
EHYNDQVRALLKWDDEGALRDMFREFRDDELEHKDTGIQYDAEKAPFYRA
LSDFIQAGCRAAITITERV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012347Ferritin-like
IPR011566Ubq_synth_Coq7
IPR009078Ferritin-like_SF