Ggra6687.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6687.t1
Unique NameGgra6687.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length412
Homology
BLAST of Ggra6687.t1 vs. uniprot
Match: A0A2V3IPV2 (Exosome complex component rrp45 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPV2_9FLOR)

HSP 1 Score: 582 bits (1501), Expect = 3.560e-206
Identity = 294/412 (71.36%), Postives = 346/412 (83.98%), Query Frame = 0
Query:    1 MKEELISTSEKRFTTDCVSANCRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTASEPAARDSLFRNSGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDSDTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTALKDASAQHPLSTVRPMLVDPEPVAMLVSKDRGPDQLSANASTWNATPVLDTAPPDLDAIEVERRSRPATDGDVVESVFGKKEFNEVREE-KDVVMNEDNKMVVEKLLQSDSDSSDDDLESAVIPKKERKTRKNRRR 411
            MKE++IS  EK FT DC+ ANCR DGRR SEARKA+ISLGPNWGFAEV +D T AVASTT++AITP PDR SEG+I+ISV+LSPTASEPAAR SLFRN+G+F+ETR CIESF+RDSRSVDTEALC+LAGVKVWSV VDV IINDDGNC D CMLAVMASLMHARRPDV+VTGKEVRI++MDEREPVPLP+HHVPLS TF LFG G+P+D DTVVLDPVK EELAS GS+SFAFNSQGEVCGVYK GGLP+H+ SF+ C+ LAA  A  LT +LK AL DASA+HPLSTVRPMLVD EPVAML  K+   ++L+A  STWNATPVLDTAPPD+DA+E   R+R     D+++ VF  +  ++  E+ KDV   E+NKM+VEKL++SDS+SS + LE+A++PKK+RK RK RRR
Sbjct:    1 MKEKVISLCEKNFTIDCIKANCRVDGRRISEARKASISLGPNWGFAEVRYDRTHAVASTTVEAITPTPDRGSEGSISISVELSPTASEPAARASLFRNTGSFIETRNCIESFVRDSRSVDTEALCVLAGVKVWSVRVDVHIINDDGNCMDACMLAVMASLMHARRPDVTVTGKEVRIHAMDEREPVPLPVHHVPLSATFGLFGGGRPFDPDTVVLDPVKTEELASNGSVSFAFNSQGEVCGVYKGGGLPLHIRSFEVCSKLAATHAVGLTAILKAALADASAEHPLSTVRPMLVDAEPVAMLAKKESEREKLAAPTSTWNATPVLDTAPPDIDAMETITRARAVPKNDLIDGVFEHENEDDQNEDMKDVGPEEENKMIVEKLIRSDSESSTEGLEAAIVPKKQRKERKTRRR 412          
BLAST of Ggra6687.t1 vs. uniprot
Match: R7QM41 (Exosome component 9 Rrp45 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM41_CHOCR)

HSP 1 Score: 439 bits (1129), Expect = 1.670e-149
Identity = 233/415 (56.14%), Postives = 306/415 (73.73%), Query Frame = 0
Query:    1 MKEELISTSEKRFTTDCVSANCRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTASEPAARDSLFRN--SGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDSDTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTALKDASAQHPLSTVRPMLVDPEPVAMLVSKD-RGPDQLSANA---STWNATPVLDTAPPDLDAIE---VERRSRPATDGDVVESVFGKKEFNE-VREEKDVVMN-----EDNKMVVEKLLQSDSDSSDDDLESAVIPK 400
            M ++ ISTSE+ F ++CVSA  R DGR  ++ R  +++LGP+WGFAEV+FD T  +AST++DA  P  +RP+EG +T+   LSPT+SE AAR+SL R+  +    E R CI+ F+R++R++DTEALCILAGVKVW+V V+VDIINDDGNC D C++AVM+SLMHARRPDV+VTGKEVR++S+DEREPVPLP+HHVPLS++FALFGAGKPY+ D VV+DPVK EE+ASGGS+SFAFN+QGEVCGVYKAGGLP+   SF +C+ L   RA +LT +L  AL D+SA+HP +++RPMLV PEPVA + S+  R  D++ + A   S WNATP+ DT PP   A +   V+  +    D  +   + G+KE +E V+ E+ V M      ED     E +  SDS SSDDDLESA+I K
Sbjct:    1 MHDKSISTSERLFASECVSAGRRLDGRSLTDPRHVSVTLGPSWGFAEVAFDNTLVIASTSVDATAPSSERPNEGVLTVVADLSPTSSEAAARESLARSGHTPVVTEIRNCIDKFVREARAIDTEALCILAGVKVWAVRVEVDIINDDGNCVDACVMAVMSSLMHARRPDVTVTGKEVRVHSLDEREPVPLPVHHVPLSVSFALFGAGKPYEPDMVVMDPVKKEEIASGGSLSFAFNAQGEVCGVYKAGGLPLQPESFVQCSELGEKRALKLTAILNKALADSSAKHPRASLRPMLVTPEPVAQVRSRHTRKKDEVMSEAAPLSMWNATPIEDTLPPPPSATDRDPVKVHAVEGVDSAIASLLQGRKEVDEIVQVEEHVEMEMEPEREDGPKPTEIIEISDSSSSDDDLESAIISK 415          
BLAST of Ggra6687.t1 vs. uniprot
Match: A0A4P9XWY0 (Ribosomal protein S5 domain 2-type protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XWY0_9FUNG)

HSP 1 Score: 214 bits (546), Expect = 2.260e-63
Identity = 115/286 (40.21%), Postives = 175/286 (61.19%), Query Frame = 0
Query:    2 KEELISTSEKRFTTDCVSANCRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTASEPAARDSLFRNSGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDS----DTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTALKDASAQ 283
            KE   S SE+ F    +    R DGR   + R   I LGP +G AEV+   TR  A  +   + P PDRP+EG   ++++LSP AS  A  ++   +    L TR+ +E  IR SR+VDTE+LCILAG KVWSV VDV +++  GN  D   +AV+A+L+H RRPDV+V G++V I++++ER PVPL +HH+P+ ++FA F  G+P +     D +V+DP ++EE    G ++   N+  E+C + KAGG P+       C  LAA +  E+T +++ A++D +++
Sbjct:    3 KEFEPSISEREFVQAALLEGKRVDGRTPYDVRAIEIHLGPEYGAAEVTLGKTRVAARASATVVRPFPDRPNEGQFMLNLELSPMAS--ATFETGRASEEEVLVTRV-LEKAIRQSRAVDTESLCILAGEKVWSVRVDVHVLDHHGNLIDCATMAVVAALLHFRRPDVTVIGEDVTIHTLEERNPVPLALHHIPICISFAFFEDGQPANHSCPCDRLVMDPSRLEERLQDGDMTVTVNTHRELCALSKAGGSPLPPDQVMRCVQLAATKGAEITNLIRKAVQDTTSR 285          
BLAST of Ggra6687.t1 vs. uniprot
Match: A0A7S4VIW0 (Hypothetical protein (Fragment) n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VIW0_9DINO)

HSP 1 Score: 213 bits (542), Expect = 1.310e-62
Identity = 113/279 (40.50%), Postives = 167/279 (59.86%), Query Frame = 0
Query:    6 ISTSEKRFTTDCVSA-NCRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTAS------EPAARDSLFRNSGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDSDTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTAL 277
            ++ SE  F    + A N R+DGR  +  R+  +  G   G AEVS   TRA+A  + + + PPP+RPSEG +T  V+L P AS       P+A+ +   N          +E  +R S++VD EALCI+ G KVWS+ VDV  ++DDGN  D C +A + +L+H R+ +V V G+ ++ Y+ DER PVPL +HH+P+ +TFALFG        T VLDP ++EE A+GG++  A N  GE+CG+ K GG+P+     +  T LAA R +E+ G +++ L
Sbjct:    6 LARSEVEFALRALRAENVRADGRALAAYRRFGLRFGAAHGEAEVSLGPTRALAVCSGEVVAPPPERPSEGRLTFHVELGPIASPGFEAGRPSAQATAVANF---------VERLLRGSKAVDAEALCIVGGQKVWSIRVDVRALDDDGNLGDACAIAALCALLHFRKAEVEVIGETMKAYAADERVPVPLSVHHLPVPVTFALFGRDGGDSDPTWVLDPNRLEEAAAGGTLCVAVNQHGELCGLNKPGGIPVDFALVERWTELAAARVKEIVGRIQSEL 275          
BLAST of Ggra6687.t1 vs. uniprot
Match: M2Y3C9 (Exosome complex component RRP45 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y3C9_GALSU)

HSP 1 Score: 215 bits (547), Expect = 2.120e-62
Identity = 115/300 (38.33%), Postives = 178/300 (59.33%), Query Frame = 0
Query:    1 MKEELISTSEKRFTTDCVSANCRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTASEPAARDSLF--RNSGAFLETRICI---ESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDSDTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTALKDASAQHPLSTVRPMLVD 295
            M++E +S  EK F  + + A  R DGR+  EAR  N   G  +G   V    T+  +S   + + P  DRP+EG +T SV LSP ASE    + L+  R S    E    +   +  IR+++++DTE LCI+AGV+VW++ VD+ +++  GN  D C +A +ASL+H R+P V+V GK+V I+ +DEREPVPL +HH+P+S++F +F      D D + +DP   EE    G++S A N+  E+C   KAGG  +      +  S A  RA E+T  L+ ALKD  +++ +++V+P+ V+
Sbjct:    1 MRDEPLSLLEKNFALEALQAGIRVDGRKIDEARLVNFEFGSQYGTVTVRLGKTKVFSSAIAEVVEPTIDRPAEGFVTFSVDLSPMASENLMLEYLYSGRTSSTLEEAAEIVRFLQQIIRENQAIDTETLCIVAGVQVWAIRVDIHVLDHCGNVLDACCMAAVASLLHMRKPVVTVVGKDVFIHGIDEREPVPLTVHHLPISVSFGIF-----LDGDLIAIDPSIQEESVMEGTLSIAVNAHKEICAFRKAGGASIETSLIFKNASYAYLRATEVTVQLEKALKDTYSRNAVASVKPLQVE 295          
BLAST of Ggra6687.t1 vs. uniprot
Match: A0A7S1FCW3 (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FCW3_NOCSC)

HSP 1 Score: 218 bits (555), Expect = 1.030e-61
Identity = 112/266 (42.11%), Postives = 164/266 (61.65%), Query Frame = 0
Query:    6 ISTSEKRFTTDCV-SANCRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTASEPAARDSLFRNSGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDSDTV-VLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRAREL 269
            IS  +  FT   + + N R+DGR+ S  R+  I LGP  G  EV+F  TRA+A  + + I PPP+R +EG +   V+  P AS    +    R S   +     +E  ++ S++VDTEALCI+ G KVWS+ VDV  ++DDGN  DVC +A + SL+H R+ DV V+G    +Y+ +ER PVPL +HH+P+ +TFALF  GK   S+T  +LDP ++EE A GG ++ + N  GE+CG+ K GG+P+     ++C   A +RA+EL
Sbjct:    5 ISKVDLEFTLQALRNENTRTDGRKRSAYRRFGIRLGPAHGEVEVNFGPTRALAVCSGEIIKPPPERANEGKLAFHVEFGPIASPSFDQG---RPSAQAISVANAVERLLKGSKAVDTEALCIVGGQKVWSIRVDVRALDDDGNLRDVCAIAALCSLLHFRKADVEVSGGGAHVYTAEERVPVPLSVHHIPVPVTFALFAEGKDKGSETTWILDPNRLEEAAMGGLLTVSVNQYGELCGLQKPGGIPVDFSLVEQCLEFAKSRAKEL 267          
BLAST of Ggra6687.t1 vs. uniprot
Match: A0A507DY13 (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DY13_9FUNG)

HSP 1 Score: 208 bits (529), Expect = 4.800e-61
Identity = 109/277 (39.35%), Postives = 166/277 (59.93%), Query Frame = 0
Query:    1 MKEELISTSEKRFTTDCVSANCRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTASEPAARDSLFRNSGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDSDTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTAL 277
            +K+   S +EK F    +  + R D R   + R   I+LGP +G AEV    TR  A+ + + I P P  P+EGNI  +   SP AS P+  DS   +S   L +R+ ++  +R SR+VDTE LCILAG KVW + VDV +++ +GN  D   +A +A+L+H RRPDV+V G+ V I++++ER P+PL +HH+P+ +TFA F  G+       V+DP  +EE    G ++F  N  G+VC + KAGG+ + +     C  +AA +A ++T ++K AL
Sbjct:    2 VKDIAPSENEKEFVLSALLKSQRVDSRGPHDVRTTRINLGPQFGHAEVRLGKTRVTANVSCEIIRPRPSAPTEGNIIFNTDFSPMAS-PSFGDSSMPSSSEVLISRL-LDKALRQSRAVDTEGLCILAGEKVWQLRVDVRVLDHEGNIVDCACIAAVAALLHFRRPDVTVLGEAVTIHTVEERNPIPLSVHHIPICVTFAFFHNGEKQ-----VVDPTLLEEQVQEGDMTFVVNKHGDVCTLSKAGGVAVDVQQVIHCARIAAAKAEDITALIKEAL 271          
BLAST of Ggra6687.t1 vs. uniprot
Match: A0A7S2VM55 (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VM55_9DINO)

HSP 1 Score: 208 bits (530), Expect = 4.690e-60
Identity = 119/280 (42.50%), Postives = 166/280 (59.29%), Query Frame = 0
Query:    6 ISTSEKRFTTDCVSAN-CRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTAS---EPAARDSLFRNSGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFG---AGKPYDSD-TVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTAL 277
            +S +E  FT   +     R DGR  +  R+  I  G   G  EVSF  TRA+A  + + + PPP+RP+EG I+  V+  P AS   EP  R S    S A L     IE  I+ SR+VD EALCI+ G +VWS+ VDV  ++DDGN  D C +A + SL+H RR DV   G   +++S ++R PVPL +HH+P+ +T+ALF    AGK   +  T VLDP ++EE A  G++  A N  GE+CGV+K GG+P+ +     CT LA  RA+E+TG ++  L
Sbjct:   26 LSRAELDFTLRALQTEGVRVDGRELTACRRLGIRFGAAHGEVEVSFGPTRALAVCSGEIVAPPPERPNEGRISFHVEFGPIASPSFEPG-RPSPHATSVANL-----IERLIKGSRAVDAEALCIVGGQQVWSIRVDVRALDDDGNLGDACAIAALCSLLHFRRADVETQGGAAKVHSAEDRVPVPLSVHHLPVPVTYALFAPPAAGKRRKAGPTWVLDPNRLEEAAMSGTLCLAVNQHGELCGVHKPGGMPLDISVIRHCTELAVTRAKEITGWIQAEL 299          
BLAST of Ggra6687.t1 vs. uniprot
Match: A0A7S1RFE0 (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RFE0_ALECA)

HSP 1 Score: 205 bits (521), Expect = 7.250e-60
Identity = 111/256 (43.36%), Postives = 154/256 (60.16%), Query Frame = 0
Query:   33 RKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTAS------EPAARDSLFRNSGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDSDTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTALKDASA 282
            R+  +  G   G AEVS   TRA+A  + + ITPPP+RP+EG I+  V+  P AS       P+AR +   N          IE  +R S++VD EALCI+ G KVWSV VDV  ++DDGN  D C +A + +L+H R+ DV V G+ +R YS +ER PVPL +HH+P+ +TFALF  G        VLDP ++EE A GG++  A N  GE+CG+ K GG+P+     + C  LAA R +E+ G +++ L DA A
Sbjct:    3 RRLALRFGAAHGEAEVSLGPTRALAVCSGEIITPPPERPNEGRISFHVEFGPIASPGFDAGRPSARATAVANF---------IERLLRGSKAVDAEALCIVGGQKVWSVRVDVRALDDDGNLGDACAIAALCALLHFRKADVEVVGEAMRAYSAEERVPVPLSVHHLPVPVTFALFSPGARGGEPAWVLDPNRLEEGAMGGALCVAVNQHGELCGLNKPGGMPVDFALVERCAELAAVRVKEIVGRIQSEL-DADA 248          
BLAST of Ggra6687.t1 vs. uniprot
Match: M7WXV5 (Exosome complex component RRP45 n=3 Tax=Rhodosporidium toruloides TaxID=5286 RepID=M7WXV5_RHOT1)

HSP 1 Score: 204 bits (520), Expect = 1.050e-59
Identity = 112/271 (41.33%), Postives = 156/271 (57.56%), Query Frame = 0
Query:    7 STSEKRFTTDCVSANCRSDGRRNSEARKANISLGPNWGFAEVSFDGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTASEPAARDSLFRNSGAFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTDVCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFALFGAGKPYDSDTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPMHLVSFDECTSLAANRARELTGVLKTAL 277
            S +E  F   C+    R DGR   E R  ++  G  +G+ E    GTR VA  + + + P PDRP EG +++  ++SP AS  AA ++   +    L TR+ +E  +R S +VD EALCI+AG KVWS+ VDV  ++D+GN  D   +A M +L H RRPDV+V G+EV ++SM ER PVPL IHH P+ +TFA FG     D    VLDP  +E     G+++ A NSQ E+C + K GG P+         SL   R RE+ G + +AL
Sbjct:    8 SLNESSFVQTCLRKGLRLDGRGMYEMRSVDVRFGEEFGWVECRLGGTRVVAQVSAEIVKPLPDRPYEGFVSLVTEISPMAS--AAYEAGRASEDEVLMTRL-LEKALRRSNAVDREALCIVAGQKVWSIRVDVHFLDDEGNMLDCVSIAAMTALRHFRRPDVTVVGEEVTVHSMTERVPVPLAIHHSPMCLTFAFFG-----DDSLAVLDPTHLESQLCTGTLTLALNSQSEICVLSKQGGAPLGADEVMRAVSLGVERVREVEGRVVSAL 270          
The following BLAST results are available for this feature:
BLAST of Ggra6687.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPV23.560e-20671.36Exosome complex component rrp45 n=1 Tax=Gracilario... [more]
R7QM411.670e-14956.14Exosome component 9 Rrp45 n=1 Tax=Chondrus crispus... [more]
A0A4P9XWY02.260e-6340.21Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A7S4VIW01.310e-6240.50Hypothetical protein (Fragment) n=2 Tax=Alexandriu... [more]
M2Y3C92.120e-6238.33Exosome complex component RRP45 n=1 Tax=Galdieria ... [more]
A0A7S1FCW31.030e-6142.11Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A507DY134.800e-6139.35Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A7S2VM554.690e-6042.50Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A7S1RFE07.250e-6043.36Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
M7WXV51.050e-5941.33Exosome complex component RRP45 n=3 Tax=Rhodospori... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..288
e-value: 6.1E-75
score: 254.2
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 42..166
e-value: 1.0E-11
score: 45.4
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 192..263
e-value: 1.2E-7
score: 31.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..411
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 5..300
NoneNo IPR availablePANTHERPTHR11097:SF14EXOSOME COMPLEX COMPONENT RRP45coord: 5..300
IPR033100Exosome complex component RRP45CDDcd11368RNase_PH_RRP45coord: 6..270
e-value: 1.69672E-108
score: 317.932
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 1..222
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 188..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:196413..197648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6687.t1Ggra6687.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 196413..197648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6687.t1 ID=Ggra6687.t1|Name=Ggra6687.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=412bp
MKEELISTSEKRFTTDCVSANCRSDGRRNSEARKANISLGPNWGFAEVSF
DGTRAVASTTIDAITPPPDRPSEGNITISVQLSPTASEPAARDSLFRNSG
AFLETRICIESFIRDSRSVDTEALCILAGVKVWSVHVDVDIINDDGNCTD
VCMLAVMASLMHARRPDVSVTGKEVRIYSMDEREPVPLPIHHVPLSMTFA
LFGAGKPYDSDTVVLDPVKIEELASGGSISFAFNSQGEVCGVYKAGGLPM
HLVSFDECTSLAANRARELTGVLKTALKDASAQHPLSTVRPMLVDPEPVA
MLVSKDRGPDQLSANASTWNATPVLDTAPPDLDAIEVERRSRPATDGDVV
ESVFGKKEFNEVREEKDVVMNEDNKMVVEKLLQSDSDSSDDDLESAVIPK
KERKTRKNRRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR015847ExoRNase_PH_dom2
IPR033100Rrp45
IPR020568Ribosomal_S5_D2-typ_fold
IPR036345ExoRNase_PH_dom2_sf