Ggra6675.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6675.t1
Unique NameGgra6675.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1042
Homology
BLAST of Ggra6675.t1 vs. uniprot
Match: A0A2V3IX79 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX79_9FLOR)

HSP 1 Score: 903 bits (2334), Expect = 6.470e-313
Identity = 548/1071 (51.17%), Postives = 698/1071 (65.17%), Query Frame = 0
Query:    6 QGALLARQLEQIAADWSALS-AADKESRLHQLRPPSQQLPPAIRAHLAAISTHTFSVLLSA-----ERCRDAFA---------AERVQIALFDAVSRLLAGVRLPWQKS------MPVAHVVHVVLHVVGADGAVSLRTSAFGALFSVCDACGFGVRAAVLPGVVSRLCAVLSHASLVHGDLVMSAFRVLRLFVDVLDVN---PLL-SQTSPVSFEDALRHRRERDVVP--TDQPA--PDASHVPNISMNVKRDHKWVSNAANHFSMHLLRLVYSHRGPLSHARADVRVTFTNFIANVLALRSFRRSDKLFISFSLSLLVLCADRFQAVARVAGHAVRSLASSGSEVCRRLLAVFRAIALRYDRHNINHLSETA--SGAVHQFLSVDDERLQMCVHGVLAALFPLRHEDSVLELRRLPSFLSSLGHSTFSSMLCSLHQQLFVPPSVPSPPPLDVQSYSNISSEAAFRMGKAECVYTIMPQLLHLSANAATYEEKAHCALVLSALLRGALTTASNIDLLDAVEELFTVLNDFFLPTFDDVSSSAMQASDRHVALKMCLLQTYTNIIQLCSDLCVKCQRPLPTRLVLVSMMSLLRDVAHGEHLVRPFAHAALATVASQVGCPSLRGLIHRHLNFIVSRLLSNLSERWATDVLIFIVGKPDILNEDATSMVHKSLAKLCDSLAGVTDQRALQVLPAVYTVLSTALAQTDTENLSSAARNAQGSVIV---GLSDADRAQLRKTILRYSEQEIPNYEELTREPSAP-GEFDDISADESEKQSPFEGLAQDTLTAMRDLLIGRSWKLRAEALACATMAVKLLGHRRKLLLPHAAKLLPLLPEQFLVLDDDQLTAGDRLLKAFKKKKLRGRTDAEKVEDLVETLNKKGAELPIVTNACKLLAALASCAGSFIQDRFIRLIYPNLIPLLRLAQFYPTLLASTMADASDSLLTPPSYGAMAASDACLEALASIALSTPIVLSTYTLSFIKYLVVFFDQRNDPLRSPRRKIIHVNRSMVRHESERWSRREYLADLIVKQLKKVNPEDVLVGLLSYDTSAPEVIRPKDVGLHPITVNAIRPR 1041
            + A LA  L  + + W  L  A+ +   LH L    Q +P AIR  L A  T T S LLS      ++ R   A         +E V  AL D ++  +      +  S      + +AH+ H+ L ++  + A+ +R +   AL ++   C   + AA LPGV S LCA L +A+  H  L   A ++L +F+ VL+V+   P++ S +S  SF DALR RR     P  T QP+  PDAS     S+ V RD  W+       +  LLR+V++  GPLSH+    RV F  F  + L +       +L  +  LSLL+L ADRF  V+      V  L  +  E+    L  FRA+A      N +H +        V +F+S D++RLQ C+H V   LFP      +LE RRL SF++SLG +TF++MLCSL ++L+V P++P  P    QS  N++ EAAFR G+  C+YT+MPQLL L+  A  +E+KAHCAL+L AL+RGAL +A + D+L  V ELF +LN F +P FD   + +  ASD  +ALK+CLL ++ ++++ C+  C + +RPLPT LVLV ++SLL DVAHGE +VRPFA  AL  VA  VGC S+R L+HRHLNF+VSR+L+ L ERWATDVL FIV KPD +N  AT MV +SL +LCDSLAGVTDQRALQVLPAV+ VLSTAL Q   +N     R A    +     LS+ DR +LR+T+ +Y  +E+ NY ELT   S   GE+DD+S D+ E Q+ FE LAQDTLTAMRDLL+GRSWKLR EAL+CAT+AVKLLGHR                         QLTAGDR+LKAFKKKKLRGR DA++VEDLVE LNKK  ELPIV+NAC+LLAALA CAGSFIQDRFIRLIYP LIPLLRLAQFYPTLLAST+ D S+SL+TPPSYGAM ASDACLE LASI+L+TP V+STY LS IKYLVVFFDQRNDPLRSP RKI+HVNRSMVR+ESERW RRE  AD+IV+QLKK+NPEDVLVGLLSYD +AP VI+P+  GLHPI V+A+RP+
Sbjct:    6 EAARLATLLRDLRSRWPRLRFASQRIEALHALPSVPQGVPHAIRRALLADLTITVSELLSLPHHQPQQPRQDSAKPLSTAPTFSEHVIKALCDVLTDAIPPAAPSFHTSATRELNLAIAHLFHLFLSLLHCERALFVRIALLDALLALARLCSPSLLAAFLPGVASSLCAFLRNAASSHSSLTPRALQLLSVFLPVLNVHHSSPVVASPSSQTSFSDALRRRRAPTEAPCRTHQPSDLPDASR----SLLVTRDSAWLDATVPALTAQLLRIVHTPAGPLSHSSPACRVAFAIFARDCLYIPPLFEVVRLRNALILSLLMLRADRFDDVSSQTNSIVSQLVPT-RELLNVFLHAFRALA------NNSHPARVCPEDDVVQRFVSFDEQRLQKCLHAVFVLLFPPNASQPLLEQRRLASFITSLGPNTFANMLCSLFRRLYVYPAIPPDPHHVRQSCCNVACEAAFRAGQTSCMYTLMPQLLVLAEEAVKFEDKAHCALLLCALMRGALVSARDPDVLRLVGELFELLNHFLVPAFDYSDAQSEHASDAVIALKVCLLSSFCDVLEQCAHFCQQSKRPLPTSLVLVCLISLLCDVAHGELIVRPFAATALELVARVVGCSSVRNLLHRHLNFVVSRVLARLDERWATDVLAFIVEKPDEVNRIATGMVQRSLTRLCDSLAGVTDQRALQVLPAVHAVLSTALTQMGGKNQFEERRRAALDSVETNRSLSETDRVELRRTLFQYCREEVVNYAELTTVSSEQAGEYDDVSKDDGENQNAFERLAQDTLTAMRDLLVGRSWKLRTEALSCATLAVKLLGHR-------------------------QLTAGDRMLKAFKKKKLRGRMDAQRVEDLVEGLNKKSRELPIVSNACELLAALAHCAGSFIQDRFIRLIYPKLIPLLRLAQFYPTLLASTVTDVSNSLVTPPSYGAMTASDACLEMLASISLATPSVVSTYALSLIKYLVVFFDQRNDPLRSPHRKIVHVNRSMVRYESERWIRREQWADVIVRQLKKINPEDVLVGLLSYDHTAPTVIKPRSAGLHPINVSALRPQ 1040          
BLAST of Ggra6675.t1 vs. uniprot
Match: R7QTL7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTL7_CHOCR)

HSP 1 Score: 431 bits (1108), Expect = 4.600e-129
Identity = 302/895 (33.74%), Postives = 468/895 (52.29%), Query Frame = 0
Query:  216 DASHVPN---ISMNVKRDHKWVSNAANHFSMHLLRLVYSHRGPLSHARADVRVTFTNFIA-NVLALRSFRRSDKLFISFSLSLLVLCADRFQAVARVAGHAVRSLASSGSEVCRRLLAVFRAIALRYDRHNINHLSETASGAVHQFLSVDDERLQMCVHGVLAALFPLRHEDSVLELRRLPSFLS---------------------------SLGHSTFSSMLCSLHQQLFVPPSVPSPPPLDVQ--SYSNISSEAAFRMGKAECVYTIMPQLL-HLSAN---------------------AATYEEKAHCALVLSALLRGALTTAS--------NID-LLDAVEELFTVLNDFFLPTFD-DVSSSAMQASDRHVALKMCLLQTYTNIIQLCSDLCVK-CQRPLPTRLVLVSMMSLLRDVAHGEHLVRPFAHAALATVASQVGCPSLRGLIHRHLNFIVSRLLSNLSERWATDVLIFIVG-KPDILNEDATSMVHKSLAKLCDSLAGVTDQRALQVLPAVYTVLSTALAQTDTENLSSAARNAQGSVIVGLSDADR----AQLRKTILRYSEQEIPNYEELTREPSAPGEFDDISADESEKQSPFEGLAQDTLTAMRDLLIGRSWKLRAEALACATMAVKLLGHRRKLLLPHAAKLLPLLPEQFLVLDDDQLTAGDRLLKAFKKKKLRGRTDAEKVEDLVETLNKKGAELPIVTNACKLLAALASCAGSFIQDRFIRLIYPNLIPLLRLAQFYPTLLASTMADASDSLLTPPSYGAMAASDACLEALASIALSTPIVLSTYTLSFIKYLVVFFDQRNDPLRSPRRKIIHVNRSMVRHESERWSRREYLADLIVKQLKKVNPEDVLVGLLSYDTSAPEVIRPKDVGLHPITVNAIR 1039
            D  HV      S+ + R+  W + A+   S+ L   + S  GP  H     R+    F+  +++   S     +       +L+ L  D +  +   A  A + L   G    R +   F+A+    +R +   +   A  +    L  D    +      +A L  L+ +D    ++    FL                             +G S F  ML S HQ L+      S  P D Q    SN+  E + ++G+A  + +I   LL H S N                      + ++ +AH  L+L A +RGA+            +++ ++    ++   +  FFLP F+ DVS       D  ++LK C+L   + +IQ  SD+  +   +PL + +VL+ ++SLL+DV+HGE  +   AH  L  +   V C + R L+ RHLN+++SR+  +L ERWA DVL FI+G + D ++E+A  ++  +L  L ++LAG  + RAL+ L A+ +VL+TA+ Q+ T    +           G  +++     A LRK +L Y   ++  Y +L+ +     E ++   +++  ++ FE +A +TL  MRDLL+GR W +RA AL CAT AV LL   +  LLPHAA +LPL+P+QF VL   +L+  + LL+   +++LRGR +AE+V++LV+ LN KG ELP+V  AC LL+ALA CAG FI++RF++LIYP + PLLRLA F+PTLL S   ++S + + PPSYGAM+ASDACLEA++S+A   P  L+ +  S +KYL V+FD RNDP  + +R   H+NRSM+RHE ERW +R   A+ IV +LK+VN  DVL GLL  D S P  ++ +   LH   V + R
Sbjct:  311 DTPHVEKSSRTSLLIARNASWSAAASREVSLRLRLFLESQTGPSCHNSVRARLAVARFVRISLMDTSSLSVDQRTRCLLIFALVELAGDEYPIIKNEALRAFKKLVKVGEVRLREIETCFKAVLTCVNRQDAFVIVGKARESDEVILGNDGSASKNIAECTIACL--LKRKDETFRVKVCKGFLRIFLPSHDIQSERASFIVTPSDFAFSLVRVGISGFCEMLMSTHQVLWNE----SGDPEDQQFLKLSNVVLETSSQIGRAGLLSSIFTTLLSHGSKNEDGEEDPGSGESARRTDSFHFGSAFKSRAHAVLILQAAVRGAIARKEIPTNEMKEHVNHVMQCARDVLGTMTCFFLPAFEHDVSDGLTSVDDTMISLKHCILHCMSALIQDMSDMYERQLSKPLSSDVVLLVLISLLKDVSHGEKGIHNAAHTTLDKIGKTVRCSNARALLGRHLNYLISRVGRHLEERWAIDVLTFIIGTRGDAVSEEAILLLDSTLRDLNNNLAGAGNSRALKSLGAIESVLATAVRQSRTTTSQNKGTEPPAMYSSGKKESNSELHIAMLRKKLLYYCTDDMAYYHDLSAKEQTEAEMEEKLNEDNFVRNAFEQVALNTLDGMRDLLVGRPWNVRAAALGCATWAVYLLEDNQTELLPHAATILPLIPDQFAVLQG-KLSKREGLLQRMNQRRLRGRENAEQVDELVKYLNGKGTELPVVIKACTLLSALAQCAGGFIRNRFVKLIYPKMRPLLRLASFFPTLLMSATMNSSGNPIPPPSYGAMSASDACLEAISSMANVLPESLAPHASSIVKYLAVYFDSRNDPRLNDKRNERHLNRSMIRHERERWEKRAQWAESIVLRLKEVNAGDVLTGLLCSDKSTPTTVQCRKASLHSTQVRSNR 1198          
The following BLAST results are available for this feature:
BLAST of Ggra6675.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IX796.470e-31351.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTL74.600e-12933.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR18460TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBERcoord: 100..905
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 475..984
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 116..549

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:160921..164046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6675.t1Ggra6675.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 160921..164046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6675.t1 ID=Ggra6675.t1|Name=Ggra6675.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1042bp
MHVMRQGALLARQLEQIAADWSALSAADKESRLHQLRPPSQQLPPAIRAH
LAAISTHTFSVLLSAERCRDAFAAERVQIALFDAVSRLLAGVRLPWQKSM
PVAHVVHVVLHVVGADGAVSLRTSAFGALFSVCDACGFGVRAAVLPGVVS
RLCAVLSHASLVHGDLVMSAFRVLRLFVDVLDVNPLLSQTSPVSFEDALR
HRRERDVVPTDQPAPDASHVPNISMNVKRDHKWVSNAANHFSMHLLRLVY
SHRGPLSHARADVRVTFTNFIANVLALRSFRRSDKLFISFSLSLLVLCAD
RFQAVARVAGHAVRSLASSGSEVCRRLLAVFRAIALRYDRHNINHLSETA
SGAVHQFLSVDDERLQMCVHGVLAALFPLRHEDSVLELRRLPSFLSSLGH
STFSSMLCSLHQQLFVPPSVPSPPPLDVQSYSNISSEAAFRMGKAECVYT
IMPQLLHLSANAATYEEKAHCALVLSALLRGALTTASNIDLLDAVEELFT
VLNDFFLPTFDDVSSSAMQASDRHVALKMCLLQTYTNIIQLCSDLCVKCQ
RPLPTRLVLVSMMSLLRDVAHGEHLVRPFAHAALATVASQVGCPSLRGLI
HRHLNFIVSRLLSNLSERWATDVLIFIVGKPDILNEDATSMVHKSLAKLC
DSLAGVTDQRALQVLPAVYTVLSTALAQTDTENLSSAARNAQGSVIVGLS
DADRAQLRKTILRYSEQEIPNYEELTREPSAPGEFDDISADESEKQSPFE
GLAQDTLTAMRDLLIGRSWKLRAEALACATMAVKLLGHRRKLLLPHAAKL
LPLLPEQFLVLDDDQLTAGDRLLKAFKKKKLRGRTDAEKVEDLVETLNKK
GAELPIVTNACKLLAALASCAGSFIQDRFIRLIYPNLIPLLRLAQFYPTL
LASTMADASDSLLTPPSYGAMAASDACLEALASIALSTPIVLSTYTLSFI
KYLVVFFDQRNDPLRSPRRKIIHVNRSMVRHESERWSRREYLADLIVKQL
KKVNPEDVLVGLLSYDTSAPEVIRPKDVGLHPITVNAIRPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold