Ggra6662.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6662.t2
Unique NameGgra6662.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length476
Homology
BLAST of Ggra6662.t2 vs. uniprot
Match: A0A2V3IX13 (COP9 signalosome complex subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX13_9FLOR)

HSP 1 Score: 612 bits (1578), Expect = 7.640e-216
Identity = 322/464 (69.40%), Postives = 370/464 (79.74%), Query Frame = 0
Query:   18 NQNHPQRISSLPDALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDAKSPSVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPFKFSSYQLSRLRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDKTMTSNRSQRRGMG--------GSSSSAKRSDAELMRLSG 473
            NQ HP RISS P+AL ALK + LPPSL  D+LRASHDLLART+DAVNTADVTTLHA R+ LHP  + LAY+S            SP VP LL EFV LVR TPA++  HA  RWIG CRHAAR+V+DT ++  A+ALIRPLR+AADKLATSP  IVPIHADFLAVCLQAKCY+ AA WLR+R+RL IDP T +QASDVHLVYHYAA+V++G+KD+ AAL CCRLALAVPAPT  P  QVAV TFKYY+LLHLLV GKAPQPFKFSSYQ SRLR+ +SEY ELA AYERMDR QT  +FESNR  FEKHGNLG+VKQVMRTLTDALIERLTNSFVTM I +VA+R+G S+++ VH V++RMIE+ KI ARIDDRKRVVRL+D    VDE LFAQVSG+LMQQSLQVLQR+DEFREKLQ+DP YV KTM   R+ RRG          G +S++KR D E+MR+ G
Sbjct:   10 NQIHPNRISSFPEALQALKAYALPPSLSADSLRASHDLLARTLDAVNTADVTTLHAQRSHLHPAQNLLAYISXXXXXXXXXXXXSPLVPQLLNEFVALVRNTPATAVPHALIRWIGVCRHAARVVIDTSDVHRALALIRPLRLAADKLATSPQSIVPIHADFLAVCLQAKCYKYAARWLRQRKRLHIDPATGLQASDVHLVYHYAAMVYMGLKDFSAALHCCRLALAVPAPTQTPLLQVAVCTFKYYILLHLLVTGKAPQPFKFSSYQFSRLRSFSSEYTELATAYERMDRCQTVQLFESNRDTFEKHGNLGLVKQVMRTLTDALIERLTNSFVTMNIANVASRVGQSNEEHVHQVLLRMIEQGKINARIDDRKRVVRLIDAQRDVDERLFAQVSGALMQQSLQVLQRIDEFREKLQTDPAYVGKTM-GGRAPRRGASSHAFGSSAGGASASKRQDGEMMRVIG 472          
BLAST of Ggra6662.t2 vs. uniprot
Match: A0A6V7PNK9 (PCI domain-containing protein n=5 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7PNK9_ANACO)

HSP 1 Score: 166 bits (419), Expect = 1.110e-42
Identity = 117/414 (28.26%), Postives = 200/414 (48.31%), Query Frame = 0
Query:   30 DALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDAKSPSVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPFKFSSYQLSR-LRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDK 442
            +++ AL  H+   S  P+ L   H LL ++ DA+ +           QL P  H L Y+  L A L+     S      L   V  +          A  ++I  C+   RL      L   +  + PLR A  KL TS + +  IH+DFL +C+ AK Y+   S L +      D +   Q  D+ L Y+Y  +++IG+K +  AL+C    +  P  T      +AV  +K Y+L+ L++ G+ P   K++S    R L+N T  Y +L+A Y     +  +   +SN   F+   NLG+VKQV+ +L    I+RLT +++T+ ++D+AN +     +E    ++RMI++ +I A I+ +  +V   +D  +      A+   S +Q+ + + +++    E++  DP YV K
Sbjct:    2 ESMEALVAHIEALSAIPEELPHLHSLLKQSEDALRSQGPGLAPLLLHQLDPSKHSLGYLYILEAYLSG-PISSDQAGGFLLSVVDFINSCSGDQIRLAPDKFIQVCK---RLKDQVMQLQVPLQGVAPLRTAIRKLQTSSEQLTTIHSDFLLLCILAKSYKTGLSILED------DILEVDQPRDLFLYYYYGGIIYIGLKRFRTALECLHNVVTAPMTTLN---AIAVEAYKKYILVSLILNGQVPSFPKYTSSTAQRNLKNHTQPYIDLSACYASGKYSDLEAFIQSNVEKFQSDNNLGLVKQVLSSLYKRNIQRLTQTYLTLSLQDIANAVQLKTPKEAEMHVLRMIQDGEIFATINQKDGMVSFHEDPEQYKTCEMAEHIDSTIQRLMALSKKLRSIDEQISCDPAYVSK 402          
BLAST of Ggra6662.t2 vs. uniprot
Match: C0PBH4 (PCI domain-containing protein n=15 Tax=Zea mays TaxID=4577 RepID=C0PBH4_MAIZE)

HSP 1 Score: 156 bits (395), Expect = 3.030e-39
Identity = 121/417 (29.02%), Postives = 202/417 (48.44%), Query Frame = 0
Query:   30 DALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDAKSP--SVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPFKFSSYQLSR-LRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDKT 443
            ++L AL  H+   S  P+ L   H LL +       A    L    A L P  H L Y+  L A  A+    S       L+T    L  C+     L A  +++  C+     V+   N+P  +  I PLR A  K+ +SP+ + P+HAD+L +CL AK Y+   S L +      D     Q  D+ L  +Y  +++IG+K +P AL+    A+  P  T      +AV  +K Y+L+ L+V G+ P   K++S    R ++N    Y EL+ +Y     T  +   ESN  AF+   NLG+VKQV+ ++    I+RLT +++T+ +ED+A  +     ++    ++RMIE+ +I A I+ +  +V   +D  +       +   S +Q+   + +++    E +  DP+Y+ KT
Sbjct:    2 ESLEALVAHIQGLSGSPEELAHLHSLLKQADGEPLRAHAAALVPFLAHLSPETHSLGYIYLLDACAASASNLSDFGGGDFLVTIAGFLTACSADQIRL-APDKFLHVCKVLKDQVMQL-NMP--IRGIAPLRAAVRKIQSSPEQLTPVHADYLLLCLLAKQYKAGLSVLED------DIFEVDQPKDLFLYCYYGGMIYIGLKKFPKALELLHNAVTAPMSTLN---AIAVEAYKKYILVSLIVNGQVPSFPKYTSISAQRSMKNHAQIYFELSTSYSNGRYTDLETFVESNSAAFQSDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIARSVQLETPEDAEMHVLRMIEDGEIHATINQKDGMVSFHEDPEQYKSVEMVEHIDSSIQRLTALSKKLASIDENMSCDPSYLLKT 405          
BLAST of Ggra6662.t2 vs. uniprot
Match: A0A383WNA8 (COP9 signalosome complex subunit 3 n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383WNA8_TETOB)

HSP 1 Score: 151 bits (382), Expect = 2.330e-37
Identity = 132/451 (29.27%), Postives = 214/451 (47.45%), Query Frame = 0
Query:   25 ISSLPDALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDAKSPSVPHLLTEFV-QLVRCTPASSALHAAHRWIGAC-RHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPV-TAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGK-APQPFKFSSYQLSRLRNL--TSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDKTMTSNRSQRRGMGGSSSSAKRSDAELM 469
            + +L + ++AL Q        PD+L      L      ++ A    L AA+A L    H L  V  LH   A     +P+     TE+  Q +R   A    H    ++  C +   +L  D R   G +A   PL  A  +LA S + + P+HAD L +CL +K Y  AA  L +     +DP  TAV A+D+ L  +Y  +V  G K  P AL+     L  P         +  + +K Y+LL L+  G  AP P KF+S+++ +L +   +  YA+LAAAY      +   V E +  AF    N G+VKQV+ +L    I+RLT +++T+ + D+A   G +   E   VI+RM+   ++ ARI+DR  +V  + D  + +    A+     ++Q + +  +V   ++ L  D +Y++K +     + RG GG        DA+++
Sbjct:    1 METLVNTIMALSQ-------APDSLGQLVGYLKTADSVLDNAQNNCLAAAQA-LDFQQHSLGIVYLLH---AHAKRPNPNANGAFTEYTAQFLRSCSAQQIQHVPEAFVELCHKFREQLAADPRAARGGIA---PLLAALQRLAPSREHLTPLHADVLQLCLLSKVYNAAAPLL-DLELTEVDPGRTAVGATDLLLYCYYGGMVAAGRKQLPRALELFLQGLTAPTMVCS---AITAAIYKKYVLLSLIHTGAVAPLP-KFTSHKVRQLPDAPDSKPYADLAAAYSSKSSDRLARVAEQHLAAFNADRNAGLVKQVLASLPVRTIQRLTQTYLTLSLADIARAAGLAGAAEAEAVILRMVARRQVFARINDRDGMVTFMQDPQQYNSAAMARKIDGAIKQCMSLSSQVQAVQDSLLLDKSYLNKVVM----RERGSGGLGGLGSAVDADMV 428          
BLAST of Ggra6662.t2 vs. uniprot
Match: A0A8J5VFW4 (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VFW4_ZIZPA)

HSP 1 Score: 155 bits (393), Expect = 2.490e-37
Identity = 122/448 (27.23%), Postives = 214/448 (47.77%), Query Frame = 0
Query:    3 PEPSAPAARVAHNHPNQNHPQRISSLPDA-----LVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHA-ALAAVDAKSPSVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPFKFSSYQLSR-LRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDKT 443
            P P     R A + PN   P   +S   A     +  L  H+   S  P+ L   H+LL +       A    L    AQL+P  H L ++  L A A +A + ++  V   L      +    A     A  +++ ACR    L  +   L   +  I PLR A  K+ TS + + PIHAD+L +CL AK Y+   S L +      D +   Q  D+ L  +Y  +++IG+K +  AL+    A+  P  +      ++V  +K Y+L+ L+  G+ P   K++S    R L++    Y +LA+ Y +   ++ +   ++N   F+   NLG+VKQV+ ++    I+RLT +++T+ +ED+A+ +  +  +E    ++RMIE+ +I A I+ +  +V   +D  +       +   S +Q+ + + +++    E +  DPTY+ KT
Sbjct:  292 PTPHKLTLRAAAHEPNPTRPPLSASSAAAGAMETVETLVAHIQGLSGSPEELAHLHNLLRQADGESLRAHSAGLLPFLAQLNPQAHSLGFLYLLEAFASSASNLRAQGVGDFLVTVADFLISCSADQIRLAPDKFLCACR---MLKNEVMQLNAPIRGIAPLRAAIRKIQTSSEELTPIHADYLLLCLLAKQYKAGLSILED------DILEVDQPKDLFLYCYYGGMIYIGLKKFTTALEFLHNAVTAPMSSLN---AISVEAYKKYILVSLIQNGQVPSFPKYTSSTAQRNLKSHAQVYVDLASCYIKGSYSELEEYIQTNADKFQSDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMYVLRMIEDGEIHATINQKDGMVSFHEDPEQYKSCEMVEHIDSSIQRLMALSKKLTSIDENILCDPTYLMKT 727          
BLAST of Ggra6662.t2 vs. uniprot
Match: A0A251UCU1 (Putative COP9 signalosome complex subunit 3 n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UCU1_HELAN)

HSP 1 Score: 150 bits (379), Expect = 1.260e-36
Identity = 112/427 (26.23%), Postives = 206/427 (48.24%), Query Frame = 0
Query:   18 NQNHPQRISSLPDALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDAKSPSVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPF-KFSSYQLSR-LRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDK 442
            +  +P+RI+   +++ +L   +   S     L   ++ L ++ D + +    T      ++ P  H L Y+  L A  A    ++ +   L+   V+ +        L    ++I  C+   RL      L   M  + PL +A  K+ TSP+ + P+H DFL VCL AKCY++    L +      D     Q  D  L  +Y  ++ IG K Y  AL+     +  P  T      +AV  +K Y+L+ L+ + +    F K++S    R L+N +  Y ELA +Y   + ++ +   E+N+  FE   NLG+VKQV+ ++    I+RLT +++T+ ++D+AN    S  +E    +++MIE+ +I A I+ +  +VR ++D  +       +   S +Q+ +++ +++    E +  DP Y+ K
Sbjct:   40 SDRNPRRINMNVNSVDSLVTEIQGLSGSSQDLAHLNNRLKQSEDVIRS-QAATFATCLTRIDPSIHSLGYLYILEACTAGAVPEAQA-NELIISVVRFIDVCSVEQILLVPDKFISVCK---RLHEQVMKLGAPMRAVGPLLMAIRKIQTSPEHLTPLHPDFLQVCLSAKCYKVGYGVLED------DICEVDQPRDFFLYCYYGGMICIGQKCYAKALELFHNVVTAPMSTMN---AIAVEAYKKYILVSLIHLRQFSTTFPKYTSSVAQRNLKNFSQPYIELANSYSTGNISELKAFVEANQEKFENGNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTAEISTPKEAEMHVLQMIEDGEIYAAINQKDGMVRFLEDPEQYKTCEMIERIDSSIQRIMKLSKKLTTMDESMSCDPLYLSK 452          
BLAST of Ggra6662.t2 vs. uniprot
Match: A0A1D6PWV0 (COP9 signalosome complex subunit 3 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6PWV0_MAIZE)

HSP 1 Score: 149 bits (375), Expect = 1.880e-36
Identity = 112/373 (30.03%), Postives = 183/373 (49.06%), Query Frame = 0
Query:   30 DALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDAKSP--SVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPFKFSSYQLSR-LRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDD 399
            ++L AL  H+   S  P+ L   H LL +       A    L    A L P  H L Y+  L A   +    S       L+T    L  C+     L A  +++  CR     V+   N+P  +  I PLR A  K+ +SP+ + P+HAD+L +CL AK Y+   S L        D     Q  D+ L  +Y  ++++G+K +P AL+    A+  P  +      +AV  +K Y+L+ L+V G+ P   K++S    R +RN    YAEL+ +Y    +T  +   +SN  AF+   NLG+VKQV+ ++    I+RLT +++T+ +ED+A  +     ++    ++RMIE+ +I A I+ +  +V   +D
Sbjct:    2 ESLEALVAHIQGLSGSPEELAHLHSLLKQADGEPLRAHAAALVPFLAHLSPETHSLGYLYLLEACATSSSNLSDFGGGDFLVTIGGFLTACSADQIRL-APDKFLNVCRVLKDQVMQL-NMP--IRGIAPLRAAVPKIQSSPEQLTPVHADYLILCLLAKQYKAGLSVLEG------DIFEVDQPKDLFLYCYYGGMIYVGLKKFPKALELLHNAVTAPMSSLN---AIAVEAYKKYILVSLIVNGQVPPFPKYTSISAQRSMRNHAQIYAELSTSYSNGSKTDLETFIQSNSAAFQSDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIARSVQLETPRDAEMHVLRMIEDGEIHASINQKDGMVSFHED 361          
BLAST of Ggra6662.t2 vs. uniprot
Match: A0A251SJ91 (Putative proteasome component (PCI) domain protein n=3 Tax=Asteraceae TaxID=4210 RepID=A0A251SJ91_HELAN)

HSP 1 Score: 148 bits (373), Expect = 4.070e-36
Identity = 108/399 (27.07%), Postives = 196/399 (49.12%), Query Frame = 0
Query:   46 PDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDAKSPSVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPF-KFSSYQLSR-LRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDK 442
            P  +   ++LL ++ D + +    T      +L P  H L Y+  L A  A+   ++ +   L+   V+ +    A        ++I  C+    LV+ T N P  M  + PL  A  K+  SP+ + P+H DFL VCL AKCY++  S L +      D     Q  D  L  +Y  ++ IG K +  AL+     +  P  +      +AV  +K Y+L+ L+ + +    F K++S    R L+N +  Y ELA +Y   + ++ Q   ++N+  FE   NLG+VKQV+ ++    I+RLT +++T+ ++D+AN    +  +E    ++ MIE+ +I A I+ +  +VR ++D  +       +   S +Q+ +++ +++    E +  DP Y+ K
Sbjct:   22 PQDVSHLNNLLKQSEDVIRS-QAATFAPCLTRLDPAVHSLGYLYVLEACTASPVPEAQA-NELILPVVRFIDVCSAEQIRLVPDKFIAVCKRLHELVM-TLNAP--MRAVGPLLTAIRKIQPSPEHLTPLHPDFLQVCLSAKCYKIGYSILED------DIYKVDQPRDFFLYCYYGGMICIGQKRFAKALELFHNVVTAPMSSMN---AIAVEAYKKYILVSLIHLRQFSSTFPKYTSSVAQRNLKNFSQPYIELANSYSTGNISELQAFVQANQEKFENGNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTAQINSPKEAEMHVLEMIEDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMKLSKKLTTMDESMSCDPLYLSK 406          
BLAST of Ggra6662.t2 vs. uniprot
Match: A0A2U1M8H7 (Proteasome component (PCI) domain protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1M8H7_ARTAN)

HSP 1 Score: 148 bits (373), Expect = 4.220e-36
Identity = 112/436 (25.69%), Postives = 214/436 (49.08%), Query Frame = 0
Query:   18 NQNHPQRISSLPDALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDAKSPSVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPF-KFSSYQLSR-LRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDE-GLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDKTMTSNRSQ 450
            N N+   + SL + ++ L            ++   H++L ++ D + +     ++   +++ P  H L ++  L A  AA   ++ +   L+  FV+ +          A +++I  C+   RL      L   M  + PLR A  K+  SP+ +  +H+DFL VCL AKCY++  S L        D     Q  +  L  +Y  ++ IG K +  AL+     +  P  T      +AV  +K Y+L+ L+ + +    F K++S    R L++  + Y ELA +Y   + T+ Q   ++N+  FE   NLG+VKQV+ ++    I+RLT +++T+ +ED+AN    +  +E    +++MIE+ +I A I+ +  +VR ++D  +    G+   +  S+ ++ +++ +++ +  EK+  DP Y+ +     R Q
Sbjct:    3 NNNNNSSVESLVNEIIRLTG--------AGSINQLHNVLKQSEDVIRSQSALYVNCL-SRIDPQIHSLGFLYVLEACTAAPVPEAQA-NELVLLFVRFIDVCNEEQIRLAPNKFIAICK---RLHEQVMALGAPMRAVAPLRTAIRKIQVSPERLTALHSDFLQVCLSAKCYKIGYSVLEN------DIYEVDQPRNFFLYCYYGGMICIGQKRFAKALELFHNVVTAPMSTLN---AIAVEAYKKYILVSLIHLRQFSASFPKYTSPAAQRNLKSFVTPYIELANSYSTGNITELQVFVQANQQKFESENNLGLVKQVVSSMYKRNIQRLTQTYLTLSLEDIANTAQITTPKEAEMHVLQMIEDGEIYATINQKDGMVRFLEDPEQYKTCGMIENIDSSI-ERIMKLSKKLTKMDEKMSCDPVYLSRVGKERRQQ 415          
BLAST of Ggra6662.t2 vs. uniprot
Match: J3MPX2 (PCI domain-containing protein n=11 Tax=Oryzinae TaxID=1648021 RepID=J3MPX2_ORYBR)

HSP 1 Score: 147 bits (372), Expect = 5.430e-36
Identity = 112/416 (26.92%), Postives = 200/416 (48.08%), Query Frame = 0
Query:   30 DALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHA-ALAAVDAKSPSVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPGAMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERRRLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTPGPFFQVAVSTFKYYMLLHLLVVGKAPQPFKFSSYQLSR-LRNLTSEYAELAAAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSFVTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDGSRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDKT 443
            +++  L  H+   S   D L   H LL +       A    L    AQLHP  H L ++  L A A +A + ++      L      +    A     A  +++  C+     V+   N+P  +  I PLR A  K+ TS + + PIHAD+L +CL AK Y+   S L +      D +   Q  D+ L  +Y  +++IG+K +  AL+    A+  P  +      +AV  +K Y+L+ L+  G+ P   K++S    R L+N    Y +L+  Y +   ++ +   + N   F+   NLG+VKQV+ ++    I+RLT +++T+ +ED+A+ +  +  +E    ++RMIE+ +I A I+ +  +V   +D  +       +   S +Q+ + + +++    E +  DP Y+ KT
Sbjct:    2 ESVETLVAHIQGLSGSADELAHLHTLLRQADGEPLRAHSAGLLPFLAQLHPQAHSLGFLYLLEAFASSASNLRAQGGGDFLVTMADFLTSCSAEQVRMAPDKFLNVCKVLKNEVMQL-NVP--IRGIVPLRAAIRKIQTSSEELTPIHADYLLLCLLAKQYKAGLSILED------DILEVHQPKDLFLYCYYGGMIYIGLKKFTIALEFLHNAVTSPMSSLN---AIAVEAYKKYILVSLIQNGQVPSFPKYASTTAQRNLKNHAQVYVDLSTCYGKGSYSELEEYIQLNAETFQSDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHVLRMIEDGEIHATINQKDGMVSFQEDPEQYKSCEMVERIDSSIQRLMALSKKLSSIDENISCDPAYLMKT 405          
The following BLAST results are available for this feature:
BLAST of Ggra6662.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX137.640e-21669.40COP9 signalosome complex subunit 3 n=1 Tax=Gracila... [more]
A0A6V7PNK91.110e-4228.26PCI domain-containing protein n=5 Tax=Ananas comos... [more]
C0PBH43.030e-3929.02PCI domain-containing protein n=15 Tax=Zea mays Ta... [more]
A0A383WNA82.330e-3729.27COP9 signalosome complex subunit 3 n=2 Tax=Scenede... [more]
A0A8J5VFW42.490e-3727.23Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A251UCU11.260e-3626.23Putative COP9 signalosome complex subunit 3 n=2 Ta... [more]
A0A1D6PWV01.880e-3630.03COP9 signalosome complex subunit 3 n=1 Tax=Zea may... [more]
A0A251SJ914.070e-3627.07Putative proteasome component (PCI) domain protein... [more]
A0A2U1M8H74.220e-3625.69Proteasome component (PCI) domain protein n=1 Tax=... [more]
J3MPX25.430e-3626.92PCI domain-containing protein n=11 Tax=Oryzinae Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 289..309
NoneNo IPR availableGENE3D1.25.40.570coord: 251..399
e-value: 2.8E-6
score: 28.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR1075826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3coord: 60..446
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 296..395
e-value: 8.7E-10
score: 39.1
IPR037753COP9 signalosome complex subunit 3PANTHERPTHR10758:SF1COP9 SIGNALOSOME COMPLEX SUBUNIT 3coord: 60..446
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 331..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:57658..59085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6662.t2Ggra6662.t2Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 57658..59085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6662.t2 ID=Ggra6662.t2|Name=Ggra6662.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=476bp
MEPEPSAPAARVAHNHPNQNHPQRISSLPDALVALKQHVLPPSLQPDALR
ASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAYVSTLHAALAAVDA
KSPSVPHLLTEFVQLVRCTPASSALHAAHRWIGACRHAARLVVDTRNLPG
AMALIRPLRIAADKLATSPDCIVPIHADFLAVCLQAKCYRLAASWLRERR
RLRIDPVTAVQASDVHLVYHYAAVVFIGVKDYPAALQCCRLALAVPAPTP
GPFFQVAVSTFKYYMLLHLLVVGKAPQPFKFSSYQLSRLRNLTSEYAELA
AAYERMDRTQTQHVFESNRHAFEKHGNLGVVKQVMRTLTDALIERLTNSF
VTMKIEDVANRLGYSDQQEVHDVIVRMIEECKICARIDDRKRVVRLVDDG
SRVDEGLFAQVSGSLMQQSLQVLQRVDEFREKLQSDPTYVDKTMTSNRSQ
RRGMGGSSSSAKRSDAELMRLSGRA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR037753CSN3
IPR036390WH_DNA-bd_sf